| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2635831 = | 81 (1.050) | 6 (0.090) | 5/238 | NT | 7.7% | intergenic (‑17/+53) | yfgJ/der | DUF1407 family protein/GTPase; multicopy suppressor of ftsJ |
| ? | NC_000913 | 2635863 = | 70 (1.010) | intergenic (‑49/+21) | yfgJ/der | DUF1407 family protein/GTPase; multicopy suppressor of ftsJ | |||||
GTTCAAAGAAGGGGAAAACCCGTATGCGAATAAGCGTAACACCCTGACGCCAACCCAGATGCGTAAACGTAAGCGTCTGATGAAGCACATCAAGAAAAATAAATAATTATCCGTAAGTATTTTATCTGCCATTCCCTCTATGAATGTAGAGGGAATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2635989‑2635831‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagagggaatggcAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAATACGAATCGGCGATCCC > NC_000913/2635863‑2636010 GTTCAAAGAAGGGGAAAACCCGTATGCGAATAAGCGTAACACCCTGACGCCAACCCAGATGCGTAAACGTAAGCGTCTGATGAAGCACATCAAGAAAAATAAATAATTATCCGTAAGTATTTTATCTGCCATTCCCTCTATGAATGTAG > 1:115183/1‑149 TTCAAAGAAGGGGAAAACCCGTATGCGAATAAGCGTAACACCCTGACGCCAACCCAGATGCGTAAACGTAAGCGTCTGATGAAGCACATCAAGAAAAATAAATAATTATCCGTAAGTATTTTATCTGCCATTCCCTCTATGAATGTAGA < 4:598578/149‑1 TCAAAGAAGGGGAAAACCCGTATGCGAATAAGCGTAACACCCTGACGCCAACCCAGATGCGTAAACGTAAGCGTCTGATGAAGCACATCAAGAAAAATAAATAATTATCCGTAAGTATTTTATCTGCCATTCCCTCTATGAATGTAGAG < 1:330725/149‑1 AAGAAGGGGAAAACCCGTATGCGAATAAGCGTAACACCCTGACGCCAACCCAGATGCGTAAACGTAAGCGTCTGATGAAGCACATCAAGAAAAATAAATAATTATCCGTAAGTATTTTATCTGCCATTCCCTCTATGAATGTAGAGGGA > 4:615807/1‑149 AAGAAGGGGAAAACCCGTATGCGAATAAGCGTAACACCCTGACGCCAACCCAGATGCGTAAACGTAAGCGTCTGATGAAGCACATCAAGAAAAATAAATAATTATCCGTAAGTATTTTATCTGCCATTCCCTCTATGAATGTAGAGGGA > 3:647786/1‑149 AAGAAGGGGAAAACCCGTATGCGAATAAGCGTAACACCCTGACGCCAACCCAGATGCGTAAACGTAAGCGTCTGATGAAGCACATCAAGAAAAATAAATAATTATCCGTAAGTATTTTATCTGCCATTCCCTCTATGAATGTAGAGGGA > 1:175167/1‑149 AGAAGGGGAAAACCCGTATGCGAATAAGCGTAACACCCTGACGCCAACCCAGATGCGTAAACGTAAGCGTCTGATGAAGCACATCAAGAAAAATAAATAATTATCCGTAAGTATTTTATCTGCCATTCCCTCTATGAATGTAGAGGGAA > 1:534959/1‑149 AGAAGGGGAAAACCCGTATGCGAATAAGCGTAACACCCTGACGCCAACCCAGATGCGTAAACGTAAGCGTCTGATGAAGCACATCAAGAAAAATAAATAATTATCCGTAAGTATTTTATCTGCCATTCCCTCTATGAATGTAGAGGGAA < 3:352867/149‑1 AAGGGGAAAACCCGTATGCGAATAAGCGTAACACCCTGACGCCAACCCAGATGCGTAAACGTAAGCGTCTGATGAAGCACATCAAGAAAAATAAATAATTATCCGTAAGTATTTTATCTGCCATTCCCTCTATGAATGTAGAGGGAATG < 4:411147/149‑1 ATTCCCTCTATGAATGTAGAGGGAATGGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTC > 1:215845/1‑149 ATTCCCTCTATGAATGTAGAGGGAATGGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTC < 2:215845/149‑1 ATTCCCTCTATGAATGTAGAGGGAATGGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATC < 1:108827/78‑1 ATTCCCTCTATGAATGTAGAGGGAATGGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATC > 2:108827/1‑78 TTCCCTCTATGAATGTAGAGGGAATGGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCT > 2:329254/1‑149 TATGAATGTAGAGGGAATGGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACT > 3:335564/1‑149 AGGGAATGGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAATACGAATC > 1:561187/1‑149 AGGGAATGGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACATTTACGCATCTGGGTTGTCGTCAGGGTGGTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAATACGAATC > 2:124719/1‑149 GGGAATGGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAATACGAATCG < 4:249827/149‑1 TGGCAGATAAAATACTTGCGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTATTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAATACGAATCGGCGAT < 4:497009/149‑1 TGGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAATACGAATCGGCGAT > 4:303733/1‑149 GGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAATACGAATCGGCGATC < 3:177967/149‑1 GGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAATACGAATCGGCGATC < 1:684865/149‑1 CAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAATACGAATCGGCGATCCC < 3:593571/149‑1 GTTCAAAGAAGGGGAAAACCCGTATGCGAATAAGCGTAACACCCTGACGCCAACCCAGATGCGTAAACGTAAGCGTCTGATGAAGCACATCAAGAAAAATAAATAATTATCCGTAAGTATTTTATCTGCCATTCCCTCTATGAATGTAGAGGGAATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2635989‑2635831‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagagggaatggcAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAATACGAATCGGCGATCCC > NC_000913/2635863‑2636010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |