New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 171732556 (0.720)3 (0.040) 3/246 NT 6.5% intergenic (‑103/+26) tyrS/pdxH tyrosyl‑tRNA synthetase/pyridoxine 5'‑phosphate oxidase
?NC_000913 = 1717390 34 (0.470)coding (618/657 nt) pdxH pyridoxine 5'‑phosphate oxidase

GCACCTTTGCCGGTACACGACTTTTCGCCAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGCCCCAAAAGCTCGGCAATGGCACTTCGCCCTGTTGAAACTTCTGCTTCAGCTCCAGGAATTTACT  >  NC_000913/1717248‑1717536
                                                                                                                                              |                                                                                                                                                  
gCACCTTTGCCGGTACACGACTTTTCGCCAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCAcgctgg                                                                                                                                              >  3:169289‑M2/1‑143 (MQ=255)
  aCCTTTGCCGGTACACGACTTTTCGCCAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCAcgctggta                                                                                                                                            <  1:483592‑M2/149‑9 (MQ=255)
          cGGTACACGACTTTTCGCCAGATGCGAAAGAGACATAGTATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGc                                                                                                                                    >  4:234812/1‑149 (MQ=255)
              acacGACTTTTCGCCTGTTGCGAAAGAGACATGGAATTAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCATGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAACCTTCCACGCATCATTTTCACGCTGGTACACAAAGCggcc                                                                                                                                >  4:63230/1‑147 (MQ=255)
                        tCGCCAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGa                                                                                                                      <  1:228634/149‑1 (MQ=255)
                         cGCCAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGAt                                                                                                                     <  3:279715/149‑1 (MQ=255)
                            cAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCt                                                                                                                  >  1:688739/1‑149 (MQ=255)
                            cAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCt                                                                                                                  >  3:172131/1‑149 (MQ=255)
                                             tAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAAc                                                                                                 <  4:425585/149‑1 (MQ=255)
                                               gAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTc                                                                                               >  4:336613/1‑149 (MQ=255)
                                                  tAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAAt                                                                                            >  3:329218/1‑149 (MQ=255)
                                                    aaGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCt                                                                                          >  1:4578/1‑149 (MQ=255)
                                                      gTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGt                                                                                        >  3:242889/1‑149 (MQ=255)
                                                       tGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGtt                                                                                       <  3:12160/149‑1 (MQ=255)
                                                         ccAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCa                                                                                     >  3:671914/1‑149 (MQ=255)
                                                           aGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAg                                                                                   <  3:636616/149‑1 (MQ=255)
                                                                cAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCAcgctggtactcctgattctggcactttattctatgtctctttcgcatctggcgaaaagtcgtgtaccggc                                                                              <  2:129600‑M2/149‑71 (MQ=255)
                                                                   gAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCAcgctggtactcctgattctggcactttattctatgtctctttcgcatctggcgaaaagtcgtgtaccggcaaa                                                                           <  4:484736‑M2/149‑74 (MQ=255)
                                                                        ccAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACt                                                                                                >  1:168589/1‑123 (MQ=255)
                                                                        ccAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACt                                                                                                <  2:168589/123‑1 (MQ=255)
                                                                           gCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCg                                                                   >  3:227871/1‑149 (MQ=255)
                                                                           gCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCg                                                                   >  2:571322/1‑149 (MQ=255)
                                                                            cGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGc                                                                  <  2:547187/149‑1 (MQ=255)
                                                                              aTTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGccc                                                                >  3:8458/1‑149 (MQ=255)
                                                                                       aGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGAc                                                                             <  4:344233/127‑1 (MQ=255)
                                                                                       aGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGAc                                                                             >  3:344233/1‑127 (MQ=255)
                                                                                        gATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGCCCCAAAAGCTCg                                                      <  2:49213/149‑1 (MQ=255)
                                                                                             ttGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGCCCCAAAAGCTCGGCAAt                                                 <  3:444160/149‑1 (MQ=255)
                                                                                                  tCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGCCCCAAAAGCTCGGCAATGGCAc                                            >  1:283278/1‑149 (MQ=255)
                                                                                                             tGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGCCCCAAAAGCTCGGCAATGGCACTTCGCCCTGtt                                 >  4:169385/1‑149 (MQ=255)
                                                                                                             tGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGCCCCAAAAGCTCGGCAATGGCACTTCGCCCTGtt                                 <  1:86202/149‑1 (MQ=255)
                                                                                                                  gACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGCCCCAAAAGCTCGGCAATGGCACTTCGCCCTGTTGAAAc                            <  4:377521/149‑1 (MQ=255)
                                                                                                                         aaTCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCACCCCAAAAGCTCGGCAATGGCACTTCGCCCTGTTGAAACTTCTGCt                     >  1:688007/1‑149 (MQ=255)
                                                                                                                          aTCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGCCCCAAAAGCTCGGCAATGGCACTTCGCCCTGTTGAAACTTCTGCtt                    >  4:277503/1‑149 (MQ=255)
                                                                                                                              tCCACGCATCATTTTCAcgctggtactcctgattctggcactttattctatgtctctttcgcatctggcgaaaagtcgtgtaccggcaaaggtgcagtcgttatatacatggagattttgatggcaagcagtaacttgattaaacaatt                >  3:484736‑M2/1‑17 (MQ=255)
                                                                                                                                  cGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGCCCCAAAAGCTCGGCAATGGCACTTCGCCCTGTTGAAACTTCTGCTTCAGCTCCa            <  1:324912/149‑1 (MQ=255)
                                                                                                                                      tcatTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGCCCCAAAAGCTCGGCAATGGCACTTCGCCCTGTTGAAACTTCTGCTTCAGCTCCAGGaa        <  4:3462/149‑1 (MQ=255)
                                                                                                                                       catTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGCCCCAAAAGCTCGGCAATGGCACTTCGCCCTGTTGAAACTTCTGCTTCAGCTCCAGGAAt       <  3:68044/149‑1 (MQ=255)
                                                                                                                                       catTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGCCCCAAAAGCTCGGCAATGGCACTTCGCCCTGTTGAAACTTCTGCTTCAGCTCCAGGAAt       <  3:336613/149‑1 (MQ=255)
                                                                                                                                            tCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAgg                                                                                  <  4:293215/69‑1 (MQ=255)
                                                                                                                                            tCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAgg                                                                                  >  3:293215/1‑69 (MQ=255)
                                                                                                                                            tCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGCCCCAAAAGCTCGGCAATGGCACTTCGCCCTGTTGAAACTTCTGCTTCAGCTCCAGGAATTTACt  <  4:103035/149‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                                  
GCACCTTTGCCGGTACACGACTTTTCGCCAGATGCGAAAGAGACATAGAATAAAGTGCCAGAATCAGGAGTACCAGCGATTAAAGCAAGATTTTTGCATCTTTTCAGGGTGCAAGACGATCAATCTTCCACGCATCATTTTCACGCTGGTACAAAAAGCGGTCATGCAGGCGATGCTCACCACCCTGCCAGAACTCAATCTGTTCAAGGCTGACGCGAAAACCGCCCCAAAAGCTCGGCAATGGCACTTCGCCCTGTTGAAACTTCTGCTTCAGCTCCAGGAATTTACT  >  NC_000913/1717248‑1717536

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.