| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1802644 = | 96 (1.090) | 6 (0.070) | 6/240 | NT | 6.0% | intergenic (‑74/‑450) | thrS/arpB | threonyl‑tRNA synthetase/pseudogene, ankyrin repeats |
| ? | NC_000913 | 1802688 = | 98 (1.190) | intergenic (‑118/‑406) | thrS/arpB | threonyl‑tRNA synthetase/pseudogene, ankyrin repeats | |||||
TGCGAATCGAATCAATGTGAAACGGAAAGGTACAATCTCCCTTTTTTTAGTGTTAACATCGCTCAACCGGGTGGAAGGTGAGAGGTTAATGTCTTTCATTTGTGTACCTGATTGCGAACCAATTTAGCATTTGTTGGCTAGATGGTTTCGCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1802797‑1802644‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcaatCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGATTGTACCTTTCCGTTTCACATTGATTCGATTCGCAATTCGTTTGTAGTGAGTACACCAGCAAAACGCTTAAAG > NC_000913/1802688‑1802835 TGCGAATCGAATCAATGTGAAACGGAAAGGTACAATCTCCCTTTTTTTAGTGTTAACATCGCTCAACCGGGTGGAAGGTGAGAGGTTAATGTCTTTCATTTGTGTACCTGATTGCGAACCAATTTAGCATTTGTTGGCTAGATGGTTTC < 4:273029/149‑1 ATCGAATCAATGTGAAACGGAAAGGTACAATCTCCCTTTTTTTAGTGTTAACATCGCTCAACCGGGTGGAAGGTGAGAGGTTAATGTCTTTCATTTGTGTACCTGATTGCGAACCAATTTAGCATTTGTTGGCTAGATGGTTTCGCAAT > 4:738035/1‑149 ATCGAATCAATGTGAAACGGAAAGGTACAATCTCCCTTTTTTTAGTGTTAACATCGCTCAACCGGGTGGAAGGTGAGAGGTTAATGTCTTTCATTTGTGTACCTGATTGCGAACCAATTTAGCATTTGTTGGCTAGATGGTTTCGCAAT < 3:763251/149‑1 ATCGAATCAATGTGAAACGGAAAGGTACAATCTCCCTTTTTTTAGTGTTAACATCGCTCAACCGGGTGGAAGGTGAGAGGTTAATGTCTTTCATTTGTGTACCTGATTGCGAACCAATTTAGCATTTGTTGGCTAGATGGTTTCGCAAT > 2:793741/1‑149 ATCGAATCAATGTGAAACGGAAAGGTACAATCTCCCTTTTTTTAGTGTTAACATCGCTCAACCGGGTGGAAGGTGAGAGGTTAATGTCTTTCATTTGTGTACCTGATTGCGAACCAATTTAGCATTTGTTGGCTAGATGGTTTCGCAAT < 2:275362/149‑1 ATCGAATCAATGTGAAACGGAAAGGTACAATCTCCCTTTTTTTAGTGTTAACATCGCTCAACCGGGTGGAAGGTGAGAGGTTAATGTCTTTCATTTGTGTACCTGATTGCGAACCAATTTAGCATTTGTTGGCTAGATGGTTTCGCAAT > 2:425663/1‑149 AACATCGCTCAACCGGGTGGAAGGTGAGAGGTTAATGTCTTTCATTTGTGTACCTGATTGCGAACCAATTTAGCATTTGTTGGCTAGATGGTTTC > 4:275891/1‑95 AACATCGCTCAACCGGGTGGAAGGTGAGAGGTTAATGTCTTTCATTTGTGTACCTGATTGCGAACCAATTTAGCATTTGTTGGCTAGATGGTTTC < 3:275891/95‑1 CCTGATTGCGAACCAATTTAGCATTTGTTGGCTAGATGGTTTCGCAATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGATTGTACCTTTCCGTTTCACATTGATT > 1:157291/1‑149 CTGATTGCGAACCAATTTAGCATTTGTTGGCTAGATGGTTTCGCAATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGATTGTACCTTTCCGTTTCACATTGATTC > 1:288891/1‑149 GAACCAATTTAGCATTTGTTGGCTAGATGGTTTCGCAATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGA < 4:467344/114‑1 GAACCAATTTAGCATTTGTTGGCTAGATGGTTTCGCAATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGA > 3:467344/1‑114 TTAGCATTTGTTGGCTAGATGGTTTCGCAATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGATTGTACCTTTCCGTTTCACATTGATTCGATTCGCAATTCGTTT < 2:157291/149‑1 TAGATGGTTTCGCAATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGATTGTACCTTTCCGTTTCACATTGATTCGATTCGCAATTCGTTTGTAGTGAGTACACCA < 2:288891/149‑1 TTCGCAATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAG < 2:550134/78‑1 TTCGCAATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAG > 1:550134/1‑78 TTCGCAATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTT < 4:397440/54‑1 TTCGCAATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTT > 3:397440/1‑54 TCGCAATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGATTGTACCTTTCCGTTTCACATTGATTCGATTCGCAATTCGTTTGTAGTGAGTACACCAGCAAAACGC < 3:687504/149‑1 GCAATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGATTGTACCTTTCCGTTTCACATTGATTCGATTCGCAATTCGTTTGTAGTGAGTACACCAGCAAAACGCTT < 4:352442/149‑1 GCAATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGATTGTACCTTTCCGTTTCACATTGATTCGATT > 4:231366/1‑111 GCAATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGATTGTACCTTTCCGTTTCACATTGATTCGATT < 3:231366/111‑1 ATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGATTGTACCTTTCCGTTTCACATTGATTCGATTCGCAATTCGTTTGTAGTGAGTACACCAGCAAAACGCTTAAA < 1:354515/149‑1 ATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGATTGTACCTTTCCGTTTCACATTGATTCGATTCGCAATTCGTTTGTAGTGAGTACACCAGCAAAACGCTTAAA < 1:447803/149‑1 ATCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGATTGTACCTTTCCGTTTCACATTGATTCGATTCGCAATTCGTTTGTAGTGAGTACACCAGCAAAACGCTTAAA > 2:639038/1‑149 TCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGATTGTACCTTTCCGTTTCACATTGATTCGATTCGCAATTCGTTTGTAGTGAGTACACCAGCAAAACGCTTAAAG < 1:147578/149‑1 TGCGAATCGAATCAATGTGAAACGGAAAGGTACAATCTCCCTTTTTTTAGTGTTAACATCGCTCAACCGGGTGGAAGGTGAGAGGTTAATGTCTTTCATTTGTGTACCTGATTGCGAACCAATTTAGCATTTGTTGGCTAGATGGTTTCGCAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1802797‑1802644‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcaatCAGGTACACAAATGAAAGACATTAACCTCTCACCTTCCACCCGGTTGAGCGATGTTAACACTAAAAAAAGGGAGATTGTACCTTTCCGTTTCACATTGATTCGATTCGCAATTCGTTTGTAGTGAGTACACCAGCAAAACGCTTAAAG > NC_000913/1802688‑1802835 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |