| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3750401 = | 203 (3.070) | 6 (0.090) | 5/260 | NT | 3.0% | coding (316/696 nt) | sgbE | L‑ribulose‑5‑phosphate 4‑epimerase |
| ? | NC_000913 | 3750427 = | 199 (3.130) | coding (342/696 nt) | sgbE | L‑ribulose‑5‑phosphate 4‑epimerase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACGTTCTTCGAAGGTTTCAATGATCACTTCGCCGGTCTGATATTCATATTCGCCGTTAATCTCCTCTGCGGTCATCTGTCGCGTGCAGGGGATGGCACCGTAAAAATAATCGGCGTGGGTGGTGCCCCAGGCGGGGAGATCCAGCCCGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3750553‑3750401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgGGGCACCACCCACGCCGATTATTTTTACGGTGCCATCCCCTGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATC > NC_000913/3750427‑3750574 ACGTTCTTCGAAGGTTTCAATGATCACTTCGCCGGTCTGATATTCATATTCGCCGTTAATCTCCTCTGCGGTCATCTGTCGCGTGCAGGGGATGGCACCGTAAAAATAATCGGCGTGGGTGGTGCCCCAGGCGGGGAGATCCAGCCCGG > 1:561969/1‑149ACGTTCTTCGAAGGTTTCAATGATCACTTCGCCGGTCTGATATTCATATTCGCCGTTAATCTCCTCTGCGGTCATCTGTCGCGTGCAGGGGATGGCACCGTAAAAATAATCGGCGTGGGTGGTGCCCCAGGCGGGGAGATCCAGCCCGG > 4:540698/1‑149 CGTTCTTCGAAGGTTTCAATGATCACTTCGCCGGTCTGATATTCATATTCGCCGTTAATCTCCTCTGCGGTCATCTGTCGCGTGCAGGGGATGGCACCGTAAAAATAATCGGCGTGGGTGGTGCCCCAGGCGGGGAGATCCAGCCCGGC > 1:33184/1‑149 CGTTCTTCGAAGGTTTCAATGATCACTTCGCCGGTCTGATATTCATATTCGCCGTTAATCTCCTCTGCGGTCATCTGTCGCGTGCAGGGGATGGCACCGTAAAAATAATCGGCGTGGGTGGTGCCCCAGGCGGGGAGATCCAGCCCGGC < 2:527068/149‑1 GTTCTTCGAAGGTTTCAATGATCACTTCGCCGGTCTGATATTCATATTCGCCGTTAATCTCCTCTGCGGTCATCTGTCGCGTGCAGGGGATGGCACCGTAAAAATAATCGGCGTGGGTGGTGCCCCAGGCGGGGAGATCCAGCCCGGCC > 1:312341/1‑149 TTCTTCGAAGGTTTCAATGATCACTTCGCCGGTCTGATATTCATATTCGCCGTTAATCTCCTCTGCGGTCATCTGTCGCGTGCAGGGGATGGCACCGTAAAAATAATCGGCGTGGGTGGTGCCCCAGGCGGGGAGATCCAGCCCGGCCT > 1:249707/1‑149 TTCTTCGAAGGTTTCAATGATCACTTCGCCGGTCTGATATTCATATTCGCCGTTAATCTCCTCTGCGGTCATCTGTCGCGTGCAGGGGATGGCACCGTAAAAATAATCGGCGTGGGTGGTGCCCCAGGCGGGGAGATCCAGCCCGGCCT > 2:396360/1‑149 TTCTTCGAAGGTTTCAATGATCACTTCGCCGGTCTGATATTCATATTCGCCGTTAATCTCCTCTGCGGTCATCTGTCGCGTGCAGGGGATGGCACCGTAAAAATAATCGGCGTGGGTGGTGCCCCAGGCGGGGAGATCCAGCCCGGCCT > 3:15389/1‑149 TCTTCGAAGGTTTCAATGATCACTTCGCCGGTCTGATATTCATATTCGCCGTTAATCTCCTCTGCGGTCATCTGTCGCGTGCAGGGGATGGCACCGTAAAAATAATCGGCGTGGGTGGTGCCCCAGGCGGTGAGATCCAGCCCGGCCTG > 1:536303/1‑149 GCCCCAGGCGGGGAGATCCAGCCCGGCCTGGGGCACCACCCACGCCGATTATTTTTACGGTGCCATCCCCTGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCG > 1:115597/1‑149 CCCAGGCGGGGAGATCCAGCCCGGCCTGGGGCACCACCCACGCCGATTATTTTTACGGTGCCATCCCCTGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAA > 2:120531/1‑149 CCAGGCGGGGAGATCCAGCCCGGCCTGGGGCACCACCCACGCCGATTATTTTTACGGTGCCATCCCCTGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAG > 1:407951/1‑149 CCAGGCGGGGAGATCCAGCCCGGCCTGGGGCACCACCCACGCCGATTATTTTTACGGTGCCATCCCCTGCACGC < 4:66562/74‑1 CCAGGCGGGGAGATCCAGCCCGGCCTGGGGCACCACCCACGCCGATTATTTTTACGGTGCCATCCCCTGCACGC > 3:66562/1‑74 CAGGCGGGGAGATCCAGCCCGGCCTGGGGCACCACCCACGCCGATTATTTTTACGGTGCCATCCCCTGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGA > 1:47387/1‑149 GCCTGGGGCACCACCCACGCCGATTATTTTTACGGTGCCATCCCCTGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACA > 2:380319/1‑149 GGGGCACCACCCACGCTGATTATTTTTACGGTGCCATCCCCTGCACGCGACAGATCACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATC < 4:461037/149‑1 GGGGCACCACCCACGCCGATTATTTTTACGGTGCCATCCCCTGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATC > 3:482842/1‑149 GGGGCACCACCCACGCCGATTATTTTTACGGTGCCATCCCCTGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATC > 3:36472/1‑149 ACGTTCTTCGAAGGTTTCAATGATCACTTCGCCGGTCTGATATTCATATTCGCCGTTAATCTCCTCTGCGGTCATCTGTCGCGTGCAGGGGATGGCACCGTAAAAATAATCGGCGTGGGTGGTGCCCCAGGCGGGGAGATCCAGCCCGGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3750553‑3750401‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgGGGCACCACCCACGCCGATTATTTTTACGGTGCCATCCCCTGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATC > NC_000913/3750427‑3750574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |