New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 132678047 (0.710)4 (0.070) 4/246 NT 8.1% intergenic (+139/‑72) yciQ/rluB enhancer of membrane protein expression; putative inner membrane protein/23S rRNA pseudouridine(2605) synthase
?NC_000913 = 1326787 48 (0.800)intergenic (+146/‑65) yciQ/rluB enhancer of membrane protein expression; putative inner membrane protein/23S rRNA pseudouridine(2605) synthase

TGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGAAGC  >  NC_000913/1326636‑1326928
                                                                                                                                                |                                                                                                                                                    
tGGTAATTAAGCTGATGTTTATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTa                                                                                                                                                  >  3:535450/1‑149 (MQ=255)
 ggTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTTAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTaa                                                                                                                                                 >  1:264871/1‑149 (MQ=255)
  gTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAg                                                                                                                                                >  2:73450/1‑149 (MQ=255)
      ttAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTtct                                                                                                                                            <  4:203144‑M2/149‑4 (MQ=255)
        aaGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTtctga                                                                                                                                          <  4:497392‑M2/149‑6 (MQ=255)
         aGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTtctgac                                                                                                                                         >  2:244625‑M2/1‑143 (MQ=255)
           cTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGAacttacatctgactc                                                                                                                                       >  2:284892‑M1/1‑134 (MQ=255)
           cTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGAacttacatctgactc                                                                                                                                       >  2:236816‑M1/1‑134 (MQ=255)
            tGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTtctgactca                                                                                                                                      >  1:268017‑M2/1‑140 (MQ=255)
                gTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGt                                                                                                                                  >  2:82413/1‑149 (MQ=255)
                  tAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGAACTTACAtctgactcactgata                                                                                                                                >  1:236816‑M2/1‑134 (MQ=255)
                  tAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGAACTTACAtctgactcactgata                                                                                                                                >  1:284892‑M2/1‑134 (MQ=255)
                   aaTCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGc                                                                                                                               <  2:472054/149‑1 (MQ=255)
                       gAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTtc                                                                                                                                             <  4:73126‑M2/131‑3 (MQ=255)
                       gAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTtc                                                                                                                                             >  3:73126‑M2/1‑129 (MQ=255)
                       gAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACaa                                                                                                                           >  2:571324/1‑149 (MQ=255)
                         aaCAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACaaaa                                                                                                                         <  1:34836/149‑1 (MQ=255)
                         aaCAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACaaaa                                                                                                                         <  1:162619/149‑1 (MQ=255)
                                       aTAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGcc                                                                                                           >  3:124527/1‑149 (MQ=255)
                                         aaaGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTg                                                                                                         >  2:267136/1‑149 (MQ=255)
                                         aaaGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTg                                                                                                         >  2:24916/1‑149 (MQ=255)
                                           aGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTggg                                                                                                       >  1:188367/1‑149 (MQ=255)
                                                gtgtAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGc                                                                                                  <  1:299133/149‑1 (MQ=255)
                                                gtgtAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGc                                                                                                  <  4:298221/149‑1 (MQ=255)
                                                 tgtAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCg                                                                                                 >  1:504546/1‑149 (MQ=255)
                                                      taTGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACAcc                                                                                            >  2:120509/1‑149 (MQ=255)
                                                             cgcCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGa                                                                                     <  1:22581/149‑1 (MQ=255)
                                                                cTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGc                                                                                  <  1:69877/149‑1 (MQ=255)
                                                                 tCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGct                                                                                 >  3:45136/1‑149 (MQ=255)
                                                                 tCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGct                                                                                 >  1:403347/1‑149 (MQ=255)
                                                                 tCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGct                                                                                 >  1:388204/1‑149 (MQ=255)
                                                                   aaaGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGctct                                                                               >  4:277304/1‑149 (MQ=255)
                                                                        cAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAg                                                                          <  2:403347/149‑1 (MQ=255)
                                                                        cAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAg                                                                          <  4:45136/149‑1 (MQ=255)
                                                                         aGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGt                                                                                                                                  >  3:128115/1‑92 (MQ=255)
                                                                         aGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGt                                                                                                                                  <  4:128115/92‑1 (MQ=255)
                                                                                  aaCGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTa                                                                <  3:379932/149‑1 (MQ=255)
                                                                                            cGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGc                                                      <  1:73450/149‑1 (MQ=255)
                                                                                              tttACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTg                                                    >  1:294673/1‑149 (MQ=255)
                                                                                                   ttAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGAacttacatctga                                                                                                                                          <  3:266711‑M1/58‑13 (MQ=255)
                                                                                                   ttAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGAacttacatctga                                                                                                                                          >  4:266711‑M1/1‑46 (MQ=255)
                                                                                                     aaGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTg                                             >  3:481235/1‑149 (MQ=255)
                                                                                                     aaGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTg                                             >  1:370997/1‑149 (MQ=255)
                                                                                                        gCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCg                                          >  4:240301/1‑149 (MQ=255)
                                                                                                        gCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCg                                          >  2:226892/1‑149 (MQ=255)
                                                                                                                 gTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGtt                                 >  4:485612/1‑149 (MQ=255)
                                                                                                                  ttCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTtc                                >  4:184809/1‑149 (MQ=255)
                                                                                                                  ttCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTtc                                >  4:304409/1‑149 (MQ=255)
                                                                                                                     aaaCAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAg                                                                                   >  2:265050/1‑95 (MQ=255)
                                                                                                                     aaaCAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAg                                                                                   <  1:265050/95‑1 (MQ=255)
                                                                                                                     aaaCAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCg                             <  3:541860/149‑1 (MQ=255)
                                                                                                                     aaaCAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCg                             <  1:120509/149‑1 (MQ=255)
                                                                                                                     aaaCAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCg                             >  3:136778/1‑149 (MQ=255)
                                                                                                                         aGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGt                         <  1:35266/149‑1 (MQ=255)
                                                                                                                          gACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGc                                                                                  >  1:268158/1‑91 (MQ=255)
                                                                                                                          gACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGc                                                                                  <  2:268158/91‑1 (MQ=255)
                                                                                                                                  tATCAGTGAGTCAGAtgtaagttctgactcactgatagtaaagtctgtttgaactcttcaggccttaagtaaacgactcgacgtttatcggcctggctttgaggcgcaacatactacactatctttatggttaaagcttgtttcgatta                >  1:236816‑M1/1‑15 (MQ=255)
                                                                                                                                  tATCAGTGAGTCAGAtgtaagttctgactcactgatagtaaagtctgtttgaactcttcaggccttaagtaaacgactcgacgtttatcggcctggctttgaggcgcaacatactacactatctttatggttaaagcttgtttcgatta                >  1:284892‑M1/1‑15 (MQ=255)
                                                                                                                                  tATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGaa                >  1:289634/1‑149 (MQ=255)
                                                                                                                                    tCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATc              >  1:41178/1‑149 (MQ=255)
                                                                                                                                      aGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCta            >  3:120663/1‑149 (MQ=255)
                                                                                                                                        tGAGTCAGAacttacatctgactcactgatagtaaagtctgtttgaactcttcaggccttaagtaaacgactcgacgtttatcggcctggctttgaggcgcaacatactacactatctttatggttaaagcttgtttcgattaacatca          >  1:268017‑M1/1‑9 (MQ=255)
                                                                                                                                        tGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCtatt          >  2:55016/1‑149 (MQ=255)
                                                                                                                                         gAGTCAGATGTAAGTtctgactcactgatagtaaagtctgtttgaactcttcaggccttaagtaaacgactcgacgtttatcggcctggctttgaggcgcaacatactacactatctttatggttaaagcttgtttcgattaacatcag         >  2:284892‑M2/1‑15 (MQ=255)
                                                                                                                                         gAGTCAGATGTAAGTtctgactcactgatagtaaagtctgtttgaactcttcaggccttaagtaaacgactcgacgtttatcggcctggctttgaggcgcaacatactacactatctttatggttaaagcttgtttcgattaacatcag         >  2:236816‑M2/1‑15 (MQ=255)
                                                                                                                                          aGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCtattat        <  3:184809/149‑1 (MQ=255)
                                                                                                                                           gTCAGAacttacatctgactcactgatagtaaagtctgtttgaactcttcaggccttaagtaaacgactcgacgtttatcggcctggctttgaggcgcaacatactacactatctttatggttaaagcttgtttcgattaacatcagct       >  2:244625‑M1/1‑6 (MQ=255)
                                                                                                                                            tCAGAacttacatctgactcactgatagtaaagtctgtttgaactcttcaggccttaagtaaacgactcgacgtttatcggcctggctttgaggcgcaacatactacactatctttatggttaaagcttgtttcgattaacatcagctt      <  4:497392‑M1/149‑145 (MQ=255)
                                                                                                                                            tCAGATGTAAGTtctgactcactgatagtaaagtctgtttgaactcttcaggccttaa                                                                                                 >  4:266711‑M2/1‑12 (MQ=255)
                                                                                                                                            tCAGATGTAAGTtctgactcactgatagtaaagtctgtttgaactcttcaggccttaa                                                                                                 <  3:266711‑M2/58‑47 (MQ=255)
                                                                                                                                             cAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGa     <  2:140770/149‑1 (MQ=255)
                                                                                                                                              aGAacttacatctgactcactgatagtaaagtctgtttgaactcttcaggccttaagtaaacgactcgacgtttatcggcctggctttgaggcgcaacatactacactatctttatggttaaagcttgtttcgattaacatcagcttaa    <  4:203144‑M1/149‑147 (MQ=255)
                                                                                                                                              aGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGaa    <  3:182512/149‑1 (MQ=255)
                                                                                                                                               gAacttacatctgactcactgatagtaaagtctgtttgaactcttcaggccttaagtaaacgactcgacgtttatcggcctggctttgaggcgcaacatactacactatctttatggttaaagcttgtttc                     >  3:73126‑M1/1‑2 (MQ=255)
                                                                                                                                               gAacttacatctgactcactgatagtaaagtctgtttgaactcttcaggccttaagtaaacgactcgacgtttatcggcctggctttgaggcgcaacatactacactatctttatggttaaagcttgtttc                     <  4:73126‑M1/131‑130 (MQ=255)
                                                                                                                                                aTGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGAAGc  <  1:267136/149‑1 (MQ=255)
                                                                                                                                                aTGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGAAGc  <  1:24916/149‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
TGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGTATGTTGCGCCTCAAAGCCAGGCCGATAAACGTCGAGTCGTTTACTTAAGGCCTGAAGAGTTCAAACAGACTTTACTATCAGTGAGTCAGATGTAAGTTCTGACTCACTGTTGCACAAAAGCATATCAGACGCCTGGGAAGGCGACACCAAAAGGAAGCTCTATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGAAGC  >  NC_000913/1326636‑1326928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.