New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4534139328 (1.170)9 (0.030) 6/248 NT 2.9% intergenic (‑86/+291) yjhX/yjhZ UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment
?NC_000913 = 4534160 303 (1.170)intergenic (‑107/+270) yjhX/yjhZ UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment
Rejected: Frequency below/above cutoff threshold.

Only 100 of 406 total aligned reads displayed.

GCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACT  >  NC_000913/4533992‑4534287
                                                                                                                                                   |                                                                                                                                                    
       gTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTg                                                                                                                                              >  2:538013/1‑149 (MQ=255)
        tCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGa                                                                                                                                             >  3:147968/1‑149 (MQ=255)
          tACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGaaa                                                                                                                                           >  4:696103/1‑149 (MQ=255)
          tACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGaaa                                                                                                                                           >  3:1195598/1‑149 (MQ=255)
             cTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAgg                                                                                                                                        >  2:693529/1‑149 (MQ=255)
             cTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAgg                                                                                                                                        >  1:2477376/1‑149 (MQ=255)
              tttAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGt                                                                                                                                       >  2:1308270/1‑149 (MQ=255)
              tttAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGt                                                                                                                                       <  3:99093/149‑1 (MQ=255)
                 aGCGAGAACGTGTAAGGTATTTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCgg                                                                                                                                    <  1:224668/149‑1 (MQ=255)
                 aGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCgg                                                                                                                                    <  3:2211665/149‑1 (MQ=255)
                 aGCGAGAACGTGTAAGGTATGACGTTCATAACGGGATAAATTCATACTGAAGCACCTATTTAAGCAAGAGGTGCCAACCGTGCAAACACCCCGCGGTGTCGGCATTCGATTGCGGCGTATTGTTAATCGGTGCGGTCTGCGAAGGTCgg                                                                                                                                    <  4:232533/149‑1 (MQ=255)
                   cGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCgggg                                                                                                                                  <  1:342289/149‑1 (MQ=255)
                    gagaACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGa                                                                                                                                 >  1:1047429/1‑149 (MQ=255)
                       aaCGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAact                                                                                                                              >  4:281327‑M2/1‑146 (MQ=255)
                           tgtAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCTCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAactgatt                                                                                                                          >  4:5195‑M2/1‑142 (MQ=255)
                               aGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCgg                                                                                                                                    >  3:1897260/1‑135 (MQ=255)
                               aGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCg                                                                                                                      >  2:10617/1‑149 (MQ=255)
                                 gTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGga                                                                                                                    <  2:1869689/149‑1 (MQ=255)
                                  tATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCgg                                                                                                                                    >  3:935522/1‑132 (MQ=255)
                                  tATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCgg                                                                                                                                    <  2:1529493/132‑1 (MQ=255)
                                  tATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGgat                                                                                                                   >  4:2170722/1‑149 (MQ=255)
                                    tgttgtTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAATGTGGAACCACAACGCGGTGTCCGCACTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGGAAAGGTCGGGGAACTGATTATCGgatga                                                                                                                 <  2:1779099/149‑1 (MQ=255)
                                    tgttgtTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGgatga                                                                                                                 <  2:2035260/149‑1 (MQ=255)
                                     gttgttCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGgatgat                                                                                                                >  4:1184829/1‑149 (MQ=255)
                                      ttgttCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGAtt                                                                                                               <  3:2252637/149‑1 (MQ=255)
                                      ttgttCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGAtt                                                                                                               <  3:1378199/149‑1 (MQ=255)
                                      ttgttCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGAtt                                                                                                               <  4:2103678/149‑1 (MQ=255)
                                        gttCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTAc                                                                                                             >  1:820095/1‑149 (MQ=255)
                                            cTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATtc                                                                                                         >  4:1291336/1‑149 (MQ=255)
                                             tGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATTGGATGATTACATtct                                                                                                        >  3:76077/1‑149 (MQ=255)
                                                cGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCa                                                                                                     >  1:1917221/1‑149 (MQ=255)
                                                  ggATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGc                                                                                                   >  3:1105171/1‑149 (MQ=255)
                                                   gATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCa                                                                                                  <  3:861607/149‑1 (MQ=255)
                                                     tAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATc                                                                                                >  1:1479138/1‑149 (MQ=255)
                                                     tAAATTCATACAGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATGCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCagc                                                                                                <  2:1824016/149‑3 (MQ=255)
                                                         ttCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAg                                                                                            >  4:1494225/1‑149 (MQ=255)
                                                             tACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCggg                                                                                                                                   <  2:2481190/106‑1 (MQ=255)
                                                              aCTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCg                                                                                       >  4:855667/1‑149 (MQ=255)
                                                              aCTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCg                                                                                       >  1:1785960/1‑149 (MQ=255)
                                                                tGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCggg                                                                                     >  4:1091271/1‑149 (MQ=255)
                                                                     aaCCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCACATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCaaa                                                                                             <  1:1540952/136‑1 (MQ=255)
                                                                        cTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttgagttg                                                                             >  1:2322138/1‑149 (MQ=255)
                                                                         tATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttgag                                                                                >  3:830358/1‑145 (MQ=255)
                                                                           tttAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGaaa                                                                          <  1:2176734/149‑1 (MQ=255)
                                                                           tttAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGaaa                                                                          <  4:1711961/149‑1 (MQ=255)
                                                                              aaTCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGt                                                                       >  4:1304868/1‑149 (MQ=255)
                                                                               atcatcATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTa                                                                      <  4:1364437/149‑1 (MQ=255)
                                                                               atcatcATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTa                                                                      <  2:1432994/149‑1 (MQ=255)
                                                                                 catcatGTGCAAGACGTGCAAACACACCGCGGAGTCTGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCAACAAAGCCTCGGGTTTAGTTGAAAGGTAtt                                                                    <  4:483273/149‑1 (MQ=255)
                                                                                 catcatGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTAtt                                                                    >  2:2439583/1‑149 (MQ=255)
                                                                                  atcatGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTAttt                                                                   >  1:1292066/1‑149 (MQ=255)
                                                                                        tgCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAg                                                             >  2:757602/1‑149 (MQ=255)
                                                                                        tgCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAg                                                             >  4:1537486/1‑149 (MQ=255)
                                                                                          cAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCg                                                           >  1:241032/1‑149 (MQ=255)
                                                                                          cAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCg                                                           >  1:1317935/1‑149 (MQ=255)
                                                                                           aaaaCGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACTTTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTATGGAGCGa                                                          >  1:1429585/1‑149 (MQ=255)
                                                                                            aaaCGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCggg                                                                                                                                   >  3:2085934/1‑75 (MQ=255)
                                                                                            aaaCGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATtctc                                                                                                       <  1:427867/103‑1 (MQ=255)
                                                                                              aCGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAata                                                       <  4:2218841/149‑1 (MQ=255)
                                                                                                 tGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCACTGACAATCAGTCCGGCCTGAAAGGGTCGGGGAACTGCTTATCGGATGATTACATTCTCCAGCATCAATGCCTCGGGTAGAGTTGAAAGGTATTTACGGAGCGAATATTa                                                    >  3:1514371/1‑149 (MQ=255)
                                                                                                  gCAAACACACCGCAGTGTCCGCATTCGATTTCGGCGCATTGATACTCAGTCCGGTGTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTGTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTaa                                                   <  1:1609988/149‑1 (MQ=255)
                                                                                                    aaaCACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAaca                                                 >  2:876402/1‑149 (MQ=255)
                                                                                                     aaCACACCGCGGTGTCCGCATTCGATAACGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCTAATATTAacac                                                <  2:603883/149‑1 (MQ=255)
                                                                                                        acacCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTa                                             >  2:417178/1‑149 (MQ=255)
                                                                                                         cacCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGgttga                                                                                 >  4:1124780/1‑112 (MQ=255)
                                                                                                          acCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGt                                           >  3:1001588/1‑149 (MQ=255)
                                                                                                               ggTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGACTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATag                                      <  4:1231412/149‑1 (MQ=255)
                                                                                                                   tCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATaggagg                                  <  2:2407332/149‑1 (MQ=255)
                                                                                                                    ccGCATTCGATTTCGTCGCATTGCTAATTAGTCCGGCCTGAAAAGTTCGGGGAACTTATTATCGGATGATTACATACTCAATCACCGAAGCCTCGGGTTGAGTTGAAAGGAATTTACGGAGCGAATATTAACAAGTAGTTAgaggagcg                                 <  4:257506/149‑3 (MQ=255)
                                                                                                                     cGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGa                                >  3:635494/1‑149 (MQ=255)
                                                                                                                         ttCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATg                            >  1:700615/1‑149 (MQ=255)
                                                                                                                             aTTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTc                        >  3:2148025/1‑149 (MQ=255)
                                                                                                                             aTTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTc                        >  1:1830266/1‑149 (MQ=255)
                                                                                                                             aTTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCCGGGAACTGTTTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTc                        >  1:1199012/1‑149 (MQ=255)
                                                                                                                              tttCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCa                       <  1:1714814/149‑1 (MQ=255)
                                                                                                                              tttCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCa                       >  2:2339869/1‑149 (MQ=255)
                                                                                                                                   gcgcATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATAtt                                                     >  4:1928013/1‑114 (MQ=255)
                                                                                                                                   gcgcATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATAtt                                                     <  3:1928013/114‑1 (MQ=255)
                                                                                                                                       aTTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGaaaaa              >  4:1876000/1‑149 (MQ=255)
                                                                                                                                       aTTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTCTCAGTAGaaaaa              >  1:1978154/1‑149 (MQ=255)
                                                                                                                                        ttGATAATCAGCCCGGCCTGAAAAGGTCGGGGAactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacatacc             <  3:1958723‑M2/149‑117 (MQ=255)
                                                                                                                                         taaTAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTGCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAgt            <  3:1557658/147‑1 (MQ=255)
                                                                                                                                         tGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACTCGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAgt            <  2:1230027/149‑1 (MQ=255)
                                                                                                                                          gATAATCAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacatacctt           <  2:2159108‑M1/149‑140 (MQ=255)
                                                                                                                                          gATAATCAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacatacctt           >  3:1346169‑M1/1‑10 (MQ=255)
                                                                                                                                          gATAATCAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttc                                                 >  3:1687618‑M1/1‑10 (MQ=255)
                                                                                                                                           aTAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAgtgt          <  1:538013/149‑1 (MQ=255)
                                                                                                                                           aTAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAgtgt          <  3:473303/149‑1 (MQ=255)
                                                                                                                                            tAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGtgtg         >  1:1104076/1‑149 (MQ=255)
                                                                                                                                              aTCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGAt       >  3:1294606/1‑149 (MQ=255)
                                                                                                                                              aTCAGTCCGGCCTGAAAAGGTCGG‑‑ctgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacataccttacacgtt      <  4:1748695‑M2/149‑125 (MQ=255)
                                                                                                                                              aTCAGTCCGGCCTGAAAAGGTCGG‑‑ctgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacataccttaca          >  3:260058‑M2/1‑25 (MQ=255)
                                                                                                                                               tCAGTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacataccttacacg      >  2:1652177‑M1/1‑5 (MQ=255)
                                                                                                                                               tCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATg      >  3:1777555/1‑149 (MQ=255)
                                                                                                                                               tCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTGGAGTTGTAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATg      >  2:349094/1‑149 (MQ=255)
                                                                                                                                                cAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGt     >  4:1667350/1‑149 (MQ=255)
                                                                                                                                                  gTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacataccttacacgttc   <  4:184821‑M1/149‑148 (MQ=255)
                                                                                                                                                  gTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacataccttacacgttc   >  3:1138635‑M1/1‑2 (MQ=255)
                                                                                                                                                  gTtccccgaccttttcaggccggactgattatcaatgcgccgaaatcgaatgcggacaccgcggtgtgtttgcacgttttgcacatgatgattaaataggttcttcagtatgaatttatcccgtcaggaacaacataccttacacgttc   >  3:1833944‑M1/1‑2 (MQ=255)
                                                                                                                                                  gTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTAc   <  1:303128/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GCAATACGTCTACCTTTAGCGAGAACGTGTAAGGTATGTTGTTCCTGACGGGATAAATTCATACTGAAGAACCTATTTAATCATCATGTGCAAAACGTGCAAACACACCGCGGTGTCCGCATTCGATTTCGGCGCATTGATAATCAGTCCGGCCTGAAAAGGTCGGGGAACTGATTATCGGATGATTACATTCTCCAGCATCAAAGCCTCGGGTTGAGTTGAAAGGTATTTACGGAGCGAATATTAACACGTAGTTATAGGAGGGATATGTTTCAGTAGAAAAAGTGTGATGTACT  >  NC_000913/4533992‑4534287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.