New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 430968 =NA (NA)7 (0.030) 4/254 NT NA noncoding (1/98 nt) REP37 (repetitive extragenic palindromic) element; contains 2 REP sequences REP37 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 430993 = NA (NA)noncoding (26/98 nt) REP37 (repetitive extragenic palindromic) element; contains 2 REP sequences REP37 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 330 total aligned reads displayed.

GTATGGTACGACCGTTATCGCAGGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAA  >  NC_000913/430847‑431141
                                                                                                                                                   |                                                                                                                                                    
gTATGGTACGACCGTTATCGCAGGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                                                                                    >  2:687206/1‑149 (MQ=255)
gTATGGTACGACCGTTATCGCAGGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                                                                                    >  1:2292463/1‑149 (MQ=255)
    ggTACGACCGTTATCGCAGGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGtt                                                                                                                                                >  3:1681327/1‑149 (MQ=255)
    ggTACGACCGTTATCGCAGGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGtt                                                                                                                                                <  1:1812569/149‑1 (MQ=255)
      tACGACCGTTATCGCAGGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTAt                                                                                                                                              <  4:1377186/149‑1 (MQ=255)
         gACCGTTATCGCAGGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTc                                                                                                                                           <  2:782242/149‑1 (MQ=255)
         gACCGTTATCGCAGGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTc                                                                                                                                           <  4:2020680/149‑1 (MQ=255)
          aCCGTTATCGCAGGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCa                                                                                                                                          <  1:591230/149‑1 (MQ=255)
             gTTATCGCAGGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCa                                                                                                                                       >  3:2109664/1‑149 (MQ=255)
               atttctgattgttaacaacgtgtgctttgttcatgccggatgcggcgtaaacgctttgtccggccaacaaaagcacgtaaattcaatatattgctgaaataacgtaggcctgatgcgctacgcttatcaggcCTACGTTATTTCa                                                                                                                                          >  4:1391452‑M2/133‑145 (MQ=255)
                         gAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAAtt                                                                                                                           >  3:1196623/1‑149 (MQ=255)
                          aaGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAAttt                                                                                                                          <  3:416624/149‑1 (MQ=255)
                                 gcAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGACGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATTAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCt                                                                                                                   >  4:717050/1‑149 (MQ=255)
                                 gcAGAAAGATGTCGGTGAAGCCAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGtt                                                                                                                                                <  2:1512594/120‑1 (MQ=255)
                                  cAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCtt                                                                                                                  <  4:461351/149‑1 (MQ=255)
                                    gAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCtttt                                                                                                                <  2:1584841/149‑1 (MQ=255)
                                    gAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCtttt                                                                                                                >  3:1485179/1‑149 (MQ=255)
                                      aaGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTttgt                                                                                                              <  3:24649/149‑1 (MQ=255)
                                       aGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTttgtt                                                                                                             <  3:917098/149‑1 (MQ=255)
                                        gATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTttgttg                                                                                                            <  2:436730/149‑1 (MQ=255)
                                           gTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGcc                                                                                                         <  1:417738/149‑1 (MQ=255)
                                            tCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCg                                                                                                        >  2:935601/1‑149 (MQ=255)
                                               gTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATGTTGAATTTACGTGCTTTTGTTGGCCGGAc                                                                                                     >  2:1658988/1‑149 (MQ=255)
                                               gTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGAc                                                                                                     >  1:1738859/1‑149 (MQ=255)
                                               gTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGAc                                                                                                     <  4:2180331/149‑1 (MQ=255)
                                                  aaGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACTTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACaaa                                                                                                  <  1:2008812/149‑1 (MQ=255)
                                                      gAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGt                                                                                              >  3:970700/1‑149 (MQ=255)
                                                             aaCCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTAcgcc                                                                                       <  2:487689/149‑1 (MQ=255)
                                                             aaCCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTAcgc                                                                                        >  1:765202/1‑148 (MQ=255)
                                                              aCCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTAcgccg                                                                                      >  2:854401/1‑149 (MQ=255)
                                                                ccATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTttgtt                                                                                                             <  4:209939/124‑1 (MQ=255)
                                                                ccATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCa                                                                                    >  2:2359133/1‑149 (MQ=255)
                                                                  aTTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAatatat                                                                                                                                 <  3:2209342/102‑1 (MQ=255)
                                                                  aTTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATc                                                                                  >  4:338692/1‑149 (MQ=255)
                                                                  aTTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATc                                                                                  >  1:289036/1‑149 (MQ=255)
                                                                  aTTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATc                                                                                  <  1:2359133/149‑1 (MQ=255)
                                                                  aTTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATc                                                                                  >  2:1818069/1‑149 (MQ=255)
                                                                   ttCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATcc                                                                                 >  3:232434/1‑149 (MQ=255)
                                                                     cGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCgg                                                                               <  3:1424898/149‑1 (MQ=255)
                                                                       cTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCa                                                                             <  4:775923/149‑1 (MQ=255)
                                                                        tGACCTGAAAGCGACGATGAACAAGAAGAATTGATTAAAACGTAAAAGTGTCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCAt                                                                            <  4:1564746/149‑1 (MQ=255)
                                                                           ccTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGaa                                                                         <  1:442329/149‑1 (MQ=255)
                                                                            cTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCg                                                                                                        >  1:1576366/1‑117 (MQ=255)
                                                                            cTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAAc                                                                        >  1:2461108/1‑149 (MQ=255)
                                                                            cTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAAc                                                                        <  3:1277685/149‑1 (MQ=255)
                                                                             tGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACa                                                                       >  2:341733/1‑149 (MQ=255)
                                                                             tGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACa                                                                       >  1:989010/1‑149 (MQ=255)
                                                                               aaaGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACaaa                                                                     <  3:1769018/149‑1 (MQ=255)
                                                                               aaaGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACaaa                                                                     <  2:268390/149‑1 (MQ=255)
                                                                               aaaGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACaaa                                                                     <  2:1239101/149‑1 (MQ=255)
                                                                                aaGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAg                                                                    <  2:2292463/149‑1 (MQ=255)
                                                                                  gCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGca                                                                  <  2:1406308/149‑1 (MQ=255)
                                                                                  gCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGca                                                                  <  4:1716011/149‑1 (MQ=255)
                                                                                  gCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGca                                                                  <  1:1824620/149‑1 (MQ=255)
                                                                                    gatgatGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTTGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGcaca                                                                >  1:1129848/1‑149 (MQ=255)
                                                                                    gatgatGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGcaca                                                                >  4:1230633/1‑149 (MQ=255)
                                                                                    gatgatGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTCCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGcaca                                                                >  4:1677100/1‑149 (MQ=255)
                                                                                     atgatgAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCacac                                                               >  4:951474/1‑149 (MQ=255)
                                                                                     atgatgAACAAGAAGAAGAGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCacac                                                               <  2:332582/149‑1 (MQ=255)
                                                                                      tgatgaACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACg                                                              >  2:2269924/1‑149 (MQ=255)
                                                                                         tgaACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACgttg                                                           <  1:2098491/149‑1 (MQ=255)
                                                                                          gaACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACgttgt                                                          >  1:888411/1‑149 (MQ=255)
                                                                                          gaACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACgttgt                                                          <  4:232434/149‑1 (MQ=255)
                                                                                           aaCAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGcc                                                                                                                                                      >  2:2031453/1‑56 (MQ=255)
                                                                                           aaCAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACgttgtt                                                         <  4:1297579/149‑1 (MQ=255)
                                                                                             cAAGAAGAAGTGATTAAAACGTCAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTaa                                                       <  4:1485941/149‑1 (MQ=255)
                                                                                              aagaagaagTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAAc                                                      <  1:1470124/149‑1 (MQ=255)
                                                                                                gaagaagTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACaa                                                    <  2:1488756/149‑1 (MQ=255)
                                                                                                gaagaagTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACaa                                                    >  3:660972/1‑149 (MQ=255)
                                                                                                 aagaagTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAAt                                                   <  1:680231/149‑1 (MQ=255)
                                                                                                        gATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATGTTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAAt                                            <  1:1658988/149‑1 (MQ=255)
                                                                                                          ttAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGc                                          >  3:2053669/1‑149 (MQ=255)
                                                                                                           tAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGcc                                         <  4:2215558/149‑1 (MQ=255)
                                                                                                            tgaaataacgtagGCCTGATAAGCGTAGCGCATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAAt                                            <  3:1391452‑M1/132‑1 (MQ=255)
                                                                                                                 gTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGcac                                                                 >  4:2353286/1‑119 (MQ=255)
                                                                                                                     aaTTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAt                               >  4:68382/1‑149 (MQ=255)
                                                                                                                      aTTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATc                              >  2:1696706/1‑149 (MQ=255)
                                                                                                                         GCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCg                           >  1:2067074‑M1/1‑149 (MQ=255)
                                                                                                                          gcctgataagcgtagcgcatcaggcCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGc                                                                                                <  3:352029‑M2/55‑1 (MQ=255)
                                                                                                                               TGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCAttt                     >  3:1613533‑M1/1‑149 (MQ=255)
                                                                                                                               TGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCAttt                     <  2:674957‑M1/149‑1 (MQ=255)
                                                                                                                                gcgcTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCAtttt                    <  4:1681327/149‑1 (MQ=255)
                                                                                                                                  gcTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCa                  <  2:1948633/149‑1 (MQ=255)
                                                                                                                                  gcTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCa                  >  2:1793971/1‑149 (MQ=255)
                                                                                                                                       cGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAAt              <  1:1374676/149‑1 (MQ=255)
                                                                                                                                       cGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAAt              <  4:837572/149‑1 (MQ=255)
                                                                                                                                         cTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCa            <  4:1158138/149‑1 (MQ=255)
                                                                                                                                            atcaggcCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGaa         <  3:1961413‑M2/142‑1 (MQ=255)
                                                                                                                                            atcaggcCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGaa         <  2:2315433‑M2/142‑1 (MQ=255)
                                                                                                                                             tcaggcCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAg        >  2:1632016‑M2/7‑149 (MQ=255)
                                                                                                                                             tcaggcCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAg        <  3:1930490‑M2/143‑1 (MQ=255)
                                                                                                                                               aggcCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGtt      <  1:1671956‑M2/145‑1 (MQ=255)
                                                                                                                                               aggcCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGtt      <  2:2115377‑M2/145‑1 (MQ=255)
                                                                                                                                               aggcCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGtt      <  3:1893795‑M2/145‑1 (MQ=255)
                                                                                                                                                ggcCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTg     <  1:854401‑M2/146‑1 (MQ=255)
                                                                                                                                                 gcCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGt    <  2:1129848‑M2/147‑1 (MQ=255)
                                                                                                                                                 gcCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGt    >  1:1037924‑M2/3‑149 (MQ=255)
                                                                                                                                                   cTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGCAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTaa  <  3:1309100/149‑1 (MQ=255)
                                                                                                                                                   cTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTaa  >  3:1033071/1‑149 (MQ=255)
                                                                                                                                                   cTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTaa  <  3:823017/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GTATGGTACGACCGTTATCGCAGGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGATTAAAACGTAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACGTTATTTCAGCAATATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAA  >  NC_000913/430847‑431141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.