| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 231071 = | 136 (0.860) | 17 (0.110) | 13/254 | NT | 12.0% | intergenic (‑190/‑51) | yafC/yafD | LysR family putative transcriptional regulator/endo/exonuclease/phosphatase family protein |
| ? | NC_000913 | 231095 = | 119 (0.790) | intergenic (‑214/‑27) | yafC/yafD | LysR family putative transcriptional regulator/endo/exonuclease/phosphatase family protein | |||||
CCTGCAATAACACCAGATGTGCATCTTTGCCGTAGTTCTTTAATACCGACAACCATTCAGCGCGTTGCTGTTTGTATATGTTCCACACCAGGATCCGAATACGCTCTTCGGTACTTAACGGTTCCCCAGGTGGTAATGCCTGGCCGATGCTCGCAAAAGACCCCGGCGGTAAGATCCTTTCCGCAGGTTGTCCGGCAACATAGCGCATGGCATAGGTGTTTTTTCGCACTTTTGACTTTGAAACCTCTATTACGTCAACCCTTCCGCACTCGGGAGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/231350‑231071‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggttGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACCGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCAAAGATGCACATCTGGTGTTATTGCAGGAAGCGCAGACAACGCC > NC_000913/231095‑231366 CCTGCAATAACACCAGATGTGCATCTTTGCCGTAGTTCTTTAATACCGACAACCATTCAGCGCGTTGCTGTTTGTATATGTTCCACACCAGGATCCGACTACGCTCTTCGGTACTTAACGGTTCCCCAGGTGGTAATGCCTGGCCGATGCTCGCAAAAGACCCCGGCGGTAAGATCCTTTCCGCAGTTTGTCCGGCAACATAGCCCATGGCATAGGTGTTTTTTCGCCCTTTTGACTTTGAAACCTCTCTTAAGTCAACCCTTCCCCACCCGGGA > 4:490134/1‑275CCTGCAATAACACCAGATGTGCATCTTTGCCGTAGTTCTTTAATACCGACAACCATTCAGCGCGTTGCTGTTTGTATATGTTCCACACCAGGATCCGAATACGCTCTTCGGTACTTAACGGTTCCCCAGGTGGTAATGCCTGGCCGATGCTCGCAAAAGACCCCGGCGGTAAGATCCTTTCCGCAGGTTGTCCGGCAACATAGCGCATGGCATAGGTGTTTTTTCGCACTTTTGACTTTGAAACCTCTATTACGTCAACCCTTCCGCCCTCGGGA > 2:534806/1‑275 CTGGAATAACACCAGATGTTCATCTTTTCCGTAGTTCTTTAATACCGACAACCCTCCAGCGCTTTGCTGTTTGTATATGTTCCACACCAGGATCCGAATACGCTCTTCGGTACTTAACGGTTCCCCAGGTGGTAATGCCTGGCCGATGCTCGCAAAAGACCCCGGCGGTAAGATCCTTTCCGCAGGTTGTCCGGCAACATAGCGCATGGCATAGGTGTTTTTTCGCACTTTTGACTTTGAAACCTCTATTACGTCAACCCTTCCGCACTCGGGA < 4:179722/274‑1 CTGCAATCAACCCAGATGTGCATCTTTGCCGTAGTTCTTTAATACCGACAACCATTCAGCGCGTTGCTGTTTGTATATGTTCCACACCAGGATCCGAATACGCTCTTCGGTACTTAACGGTTCCCCAGGTGGTAATGCCTGGCCGATGCTCGCAAAAGACCCCGGCGGTAAGATCCTTTCCGCAGGTTGTCCGGCAACATAGCGCATGGCATAGGTGTTTTTTCGCACTTTTGACTTTGAAACCTCTATTACGTCAACCCTTCCGCACTCGGGA < 2:434930/274‑1 aaaacccggTGTGCATCTTGTGCGTAGTTCTTTAAAACCGACAACCATTCAGCGCGTTGCTTGTTGGAGATGTTCCACACCAGGATCCTAATACGCTCTTCGGAACTTAACGGTGCCCCAGGTGGTAATGCCTGGCCGATGCTCGCAAAAGACCCCGGCGGTAAGATCCTTTCCGCAGGTTGTCCGGCAACATAGCGCATGGCATAGGTGTTTTTTCGCACTGTTGACTTTGAAACCTCTATTACGTCAACCCTTCCGCACTCGGGAGGGTTcta < 4:376476/266‑4 CCAGATGTGCATCTTTGCCGTAGTTCTTTAATACCGACAACCATTCAGCGCGTTGCTGTTTGTATATGTTCCACACCAGGATCCGAATACGCTCTTCGGTACTTAACGGTTCCCCAGGTGGTAATGCCTGGCCGATGCTCGCAAAAGACCCCGGCGGTAATATCCTTTCCGCCGGTTGTCCGGCAACATAGCGCATTGCCTAGGTGTTTTTTCGCCCTTTTGACTTTGAAACCTCTATTACGGCACCCCTTCCGCAACCGGGAGGGgtcaactg > 4:67002/1‑266 AGATGTGCATCTTTGCCGTAGTTCTTTAATACCGACAACCATTCAGCGCGTTGCTGTTTGTATATGTTCCACACCAGGATCCGAATACGCTCTTCGGTACTTAACGGTTCCCCAGGTGGTAATGCCTGGCCGATGCTCGCAAAAGACCCCGGCGGTAAGATCCTTTCCGCAGGTTGTCCGGCAACATAGCGCATGGCATAGGTGTTTTTTCGCACTTTTGACTTTGAAACCTCTATTACGTCAACCCTTCCGCACTCGGGA < 4:443038/261‑1 TTAACGGTTCCCCAGGTGGTAATGCCTGGCCGATGCTCGCAAAAGACCCCGGCGGTAAGATCCTTTCCGCAGGTTGTCCGGCAACATAGCGCATGGCATAGGTGTTTTTTCGCACTTTTGACTTTGAAACCTCTATTACGTCAACCCTTCCGCACTCGGGAGGGT > 3:138191/1‑165 GTTTTTTCGCACTTTTGACTTTGAAACCTCTATTACGTCAACCCTTCCGCACTCGGGAGGGTT < 8:400712/63‑1 GTTTTTTCGCACTTTTGACTTTGAAACCTCTATTACGTCAACCCTTCCGCACTCGGGAGGGTT > 7:400712/1‑63 TTTCGCACTTTTGACTTTGAAACCTCTATTACGTCAACCCTTCCGCACTCGGGAGG < 8:681511/56‑1 TTTCGCACTTTTGACTTTGAAACCTCTAGTACGTCAACCCTTCCGCACTCGGGAGG > 7:681511/1‑56 CAACCCTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCC < 6:727054/140‑1 CAACCCTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGCGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCC > 5:727054/1‑140 AACCCTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCCAGGCATTAC > 5:829775/1‑148 ACCCTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAA > 5:783878/1‑61 ACCCTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAA < 6:783878/61‑1 CCCTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCCAGGCATTACCA > 6:928180/1‑148 CCCTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAA < 7:611966/100‑1 CCCTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAA > 8:611966/1‑100 CCCTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTG < 8:1115243/83‑1 CCCTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTG > 7:1115243/1‑83 CCTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCT > 6:21731/1‑120 CCTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCT < 5:21731/120‑1 CTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAA < 6:833214/57‑1 CTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAA > 5:833214/1‑57 CTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAA > 7:35101/1‑57 CTTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAA < 8:35101/57‑1 TTCCGCACTCGGGAGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCCAGGCATTACCACCT < 6:829775/148‑1 AGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAAC < 6:532828/45‑1 AGGGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAAC > 5:532828/1‑45 GGTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCCAGGCATTACCACCTGGGGAACCGTTAAGT < 5:928180/148‑1 GTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCCAGGCATTACCGCC < 3:122829/131‑1 GTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACCGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCAAAGATGCACATCTGGTGTTATTGCAGGAAGCGCAGACAACGCC < 2:244574/275‑1 GTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCCAGGCATTA > 7:544580/1‑126 GTTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCCAGGCATTA < 8:544580/126‑1 TTGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACCGAAGAGCGTATTCGGATCCTGGTGT > 4:216329/1‑174 TGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGA > 6:387572/1‑67 TGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGA < 5:387572/67‑1 CCTGCAATAACACCAGATGTGCATCTTTGCCGTAGTTCTTTAATACCGACAACCATTCAGCGCGTTGCTGTTTGTATATGTTCCACACCAGGATCCGAATACGCTCTTCGGTACTTAACGGTTCCCCAGGTGGTAATGCCTGGCCGATGCTCGCAAAAGACCCCGGCGGTAAGATCCTTTCCGCAGGTTGTCCGGCAACATAGCGCATGGCATAGGTGTTTTTTCGCACTTTTGACTTTGAAACCTCTATTACGTCAACCCTTCCGCACTCGGGAGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/231350‑231071‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggttGACGTAATAGAGGTTTCAAAGTCAAAAGTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACCGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCAAAGATGCACATCTGGTGTTATTGCAGGAAGCGCAGACAACGCC > NC_000913/231095‑231366 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |