New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 120780584 (0.530)85 (0.610) 66/234 NT 56.3% coding (305/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 = 1209602 58 (0.420)pseudogene (18/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 359 total aligned reads displayed.

GATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTAT  >  NC_000913/1207534‑1208071
                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                          
       tCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTTACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACt                                                                                                                                                                                                                                                                   <  2:211033/274‑1 (MQ=255)
                            ttACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTCTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCTAAAACCTTGGTTTGGGAGCAGGctccgcattaactgttggtttcccggttcg                                                                                                                                                                                                                                              >  4:397418‑M1/1‑244 (MQ=255)
                                    ggTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTCCCGCACTTCGCGCGCTTCTGTTAAGCCGCAAGAATACGTTTGGCGATATCAAATCGGATGGCACTGTCCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGcactgcattacctgttgttgtccgggttccttggcctt                                                                                                                                                                                                                                      >  4:126816‑M1/1‑236 (MQ=255)
                                    ggTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAACCCTTGGTTTGGGAGAGGGctctgcattacctgttggtgtcccggttccgtggcctt                                                                                                                                                                                                                                      >  4:284870‑M1/1‑236 (MQ=255)
                                         cccccAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc                                                                                                                                                                                                                                 <  2:455497‑M1/274‑44 (MQ=255)
                                                               gcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttttagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                                                                                                                                                                          >  2:15237‑M1/194‑275 (MQ=255)
                                                                                         cATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgct                                                                                                                                                                                 >  4:365330‑M1/1‑183 (MQ=255)
                                                                                             ttGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgcag                                                                                                                                                                             >  2:120472‑M1/1‑179 (MQ=255)
                                                                                                       aaCTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaa                                                                                                                                                                  <  2:65238‑M1/275‑107 (MQ=255)
                                                                                                        aCTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaa                                                                                                                                                                  >  2:362571‑M1/1‑168 (MQ=255)
                                                                                                             gCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggca                                                                                                                                                            >  2:228954‑M1/1‑163 (MQ=255)
                                                                                                                    gcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCCACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGCTTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGTTGGAAGTCCGCAAAAg                                                                                                                                                     <  4:436717‑M1/135‑1 (MQ=255)
                                                                                                                             agcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCct                                                                                                                                            <  2:192325‑M1/144‑1 (MQ=255)
                                                                                                                                 ggTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                                                                                                                                                                    <  2:439384/167‑1 (MQ=255)
                                                                                                                                  gTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGc                                                                                                                                                          >  1:3161/1‑256 (MQ=255)
                                                                                                                                    tacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAANGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTAtgattgnggn                                                                                                                                                                                                    <  4:569939‑M1/88‑5 (MQ=255)
                                                                                                                                           tagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                                                                                                                                                                >  6:127370‑M1/118‑145 (MQ=255)
                                                                                                                                                 aGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAAc                                                                                                                                                                                                                                                       >  8:223352/1‑148 (MQ=255)
                                                                                                                                                   gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcc                                                                                                                                                                                                                                                     <  6:857445‑M1/148‑24 (MQ=255)
                                                                                                                                                      cggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTa                                                                                                                                                                                                                                                  >  7:109352/1‑148 (MQ=255)
                                                                                                                                                      cggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTAGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGct                                                                                                                                                                                                                                                                          <  8:869773‑M1/124‑3 (MQ=255)
                                                                                                                                                                  ttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                                                                                                                                                                   <  6:810784‑M1/41‑1 (MQ=255)
                                                                                                                                                                  ttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                                                                                                                                                                   <  6:600806‑M1/41‑1 (MQ=255)
                                                                                                                                                                   tacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                                                                                                                                                           >  5:755015/1‑142 (MQ=255)
                                                                                                                                                                        acCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgccatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgaaaaataaattccctgatttaagtggtgagtttattcgtggcctttc                                                                                                 >  4:487563‑M1/1‑104 (MQ=255)
                                                                                                                                                                         ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttc                                                                                                                                                                                                                                     <  6:741730‑M1/142‑40 (MQ=255)
                                                                                                                                                                          cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctg                                                                                                                                                                                                                                                                       <  6:658938‑M1/107‑6 (MQ=255)
                                                                                                                                                                            cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaacggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgac                                                                                             >  2:54111‑M1/1‑100 (MQ=255)
                                                                                                                                                                              cTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                                                                                                                                                          <  5:367184/148‑1 (MQ=255)
                                                                                                                                                                                  ccggcatgttgttaatccgcAGGATTCGTTTTGGCGATTTCAAAGCGGATTGCGCTGTGCAATCGGCTCTCGAAAACCTTGGTTTGGGGGAAGGctcttccttacctgttggtgtcccggttccgtggccttcagccactccgccaccaggctggctgaagtgcaatggtaccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggcttggatgacaggcag                                                                                       <  4:46640‑M1/266‑182 (MQ=255)
                                                                                                                                                                                   ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttctccattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGc                                                                                                                                                                                            <  4:319824‑M1/96‑1 (MQ=255)
                                                                                                                                                                                     aataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                                                                                                                                                                    >  3:48537‑M1/76‑115 (MQ=255)
                                                                                                                                                                                       taagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                                                                                                                                                        >  1:99179‑M1/74‑173 (MQ=255)
                                                                                                                                                                                       taagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttctccattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                                                                                                                                                        >  2:319825‑M1/74‑173 (MQ=255)
                                                                                                                                                                                             ttAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatta                                                                                                                                                                                                                                                                  >  8:825873‑M1/1‑83 (MQ=255)
                                                                                                                                                                                             ttAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatta                                                                                                                                                                                                                                                                  <  7:825873‑M1/93‑11 (MQ=255)
                                                                                                                                                                                               ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt                                                                                                                                                                                                         <  8:1096302‑M1/83‑1 (MQ=255)
                                                                                                                                                                                                taaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                                                                                                                                               <  5:443669‑M1/77‑1 (MQ=255)
                                                                                                                                                                                                taaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                                                                                                                                                                        <  5:1032756‑M1/84‑1 (MQ=255)
                                                                                                                                                                                                 gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaac                                                                                                                                                                                                                      <  8:1023317‑M1/133‑55 (MQ=255)
                                                                                                                                                                                                 gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                                                                                                                                               >  6:339144/1‑140 (MQ=255)
                                                                                                                                                                                                  ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgt                                                                                                                                                                                                                                                             >  6:460665‑M1/1‑78 (MQ=255)
                                                                                                                                                                                                  aatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                                                                                                                                                      >  7:874136‑M1/63‑148 (MQ=255)
                                                                                                                                                                                                   atccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                                                                                                                                                              >  5:1048685‑M1/62‑123 (MQ=255)
                                                                                                                                                                                                    gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgca                                                                                                                                                                                                     >  6:1016208‑M1/1‑76 (MQ=255)
                                                                                                                                                                                                     ccccctggtaacagcaggaatgatgccatttgcttgttctttctccattttcataaccgTTGGTGTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCGACAGTAGGACGAGCCGGTTTGATAGCTATACCGGTTATGATTGGTGGTATTTAGCAATCAGTAATCATTCAGTTGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGTGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAAtt                                                                    >  1:111199‑M1/60‑275 (MQ=255)
                                                                                                                                                                                                     cAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaat                                                                                                                                                                                                   >  5:521537‑M1/1‑75 (MQ=255)
                                                                                                                                                                                                     cAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                                                                                                                                                                     >  6:382235/1‑98 (MQ=255)
                                                                                                                                                                                                     aaagAATCCGTTTGGGGATATCAAATCGGATGGAACTGGGCAAACGGGTCTCGAAAACCTTGGTTTGGGAGAAGGctcggcattacctgttggtggcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgct                                                                    <  4:165921‑M1/274‑201 (MQ=255)
                                                                                                                                                                                                         aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                                                                                                                                               <  8:507863/148‑1 (MQ=255)
                                                                                                                                                                                                         aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                                                                                                                                               >  7:507863/1‑148 (MQ=255)
                                                                                                                                                                                                           tCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttc                                                                                                                                                                                                                                     <  6:774582‑M1/108‑40 (MQ=255)
                                                                                                                                                                                                            ccGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccg                                                                                                                                                                                                                                             >  7:201924‑M1/1‑68 (MQ=255)
                                                                                                                                                                                                            ccGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                                                                                                                                                             >  6:249721/1‑83 (MQ=255)
                                                                                                                                                                                                                   caggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagca                                                                                                                                                                                                                                                         >  2:378545‑M1/46‑80 (MQ=255)
                                                                                                                                                                                                                             aTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaa                                                                                                                                                                           >  7:746619‑M1/1‑51 (MQ=255)
                                                                                                                                                                                                                             aTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaac                                                                                                                                                                                                                      >  6:1045756‑M1/1‑51 (MQ=255)
                                                                                                                                                                                                                             aTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                                                                                                                                                           >  5:282584/1‑84 (MQ=255)
                                                                                                                                                                                                                             aTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                                                                                                                                               <  5:634911/128‑1 (MQ=255)
                                                                                                                                                                                                                             aTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTa                                                                                                                                                                                    <  6:549522/139‑1 (MQ=255)
                                                                                                                                                                                                                                     gCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg                                                                                                                                                                                                       >  7:70268/1‑112 (MQ=255)
                                                                                                                                                                                                                                     gCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg                                                                                                                                                                                                       <  8:70268/112‑1 (MQ=255)
                                                                                                                                                                                                                                       tgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAt                                                                                                                                                                               <  7:1103456‑M1/109‑1 (MQ=255)
                                                                                                                                                                                                                                         tgtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcaggggtatgcaacggaggatc                                <  4:228953‑M1/275‑237 (MQ=255)
                                                                                                                                                                                                                                          gtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                                                                                                                                               >  5:15826/1‑115 (MQ=255)
                                                                                                                                                                                                                                           tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctggga                                                                                                 >  2:263762‑M1/1‑37 (MQ=255)
                                                                                                                                                                                                                                               cttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCa                                                                                                                                                                                           >  3:83236‑M1/18‑114 (MQ=255)
                                                                                                                                                                                                                                               aaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTa                                                                                                                                                                                                                                                  <  6:995151/59‑1 (MQ=255)
                                                                                                                                                                                                                                                ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa                                                                                                                                                                                                                             <  8:763762‑M1/63‑1 (MQ=255)
                                                                                                                                                                                                                                                 tcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                                                                                                                                                                                                                 >  8:580250‑M1/16‑90 (MQ=255)
                                                                                                                                                                                                                                                    ttttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAAt                                                                                                                                                                                  >  8:689523‑M1/13‑118 (MQ=255)
                                                                                                                                                                                                                                                     tttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCa                                                                                                                                                   <  6:28813‑M1/137‑1 (MQ=255)
                                                                                                                                                                                                                                                       tcGAACACCTTGGTTTGGAAGAAGGatcggcattagctgttggtgtcccggtttcgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccggtttttctgctgaagaatgcccggaactggcaaaggcttatccgacaaatgaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcaggggtatgcaacggaggatcatgctcatggatta                  <  1:63289‑M1/275‑251 (MQ=255)
                                                                                                                                                                                                                                                          taaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                                                                                                                                                                                                         <  5:200906‑M1/67‑1 (MQ=255)
                                                                                                                                                                                                                                                          aaaaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcc                                                                                                                                                                                                                                                     >  5:813895‑M1/1‑22 (MQ=255)
                                                                                                                                                                                                                                                          aaaaCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAc                                                                                                                                                                                                                    <  8:375468/78‑1 (MQ=255)
                                                                                                                                                                                                                                                          aaaaCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAc                                                                                                                                                                                                                    >  7:375468/1‑78 (MQ=255)
                                                                                                                                                                                                                                                           aaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTaa                                                                                                                                                                                   <  5:941167‑M1/105‑1 (MQ=255)
                                                                                                                                                                                                                                                           aaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGcc                                                                                                                                             <  7:75848‑M1/143‑1 (MQ=255)
                                                                                                                                                                                                                                                             aCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg                                                                                                                                                                                                       <  8:615617/88‑1 (MQ=255)
                                                                                                                                                                                                                                                             aCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtgg                                                                                                                                                                                                       >  7:615617/1‑88 (MQ=255)
                                                                                                                                                                                                                                                               cTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGtt                                                                                                                                                                                                                                <  5:787913/61‑1 (MQ=255)
                                                                                                                                                                                                                                                                 TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                                                                                                                                                             >  7:685049‑M1/1‑94 (MQ=255)
                                                                                                                                                                                                                                                                 TGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa                                                                                                                                                                                       >  6:877452‑M1/1‑100 (MQ=255)
                                                                                                                                                                                                                                                                 TGGTTTGGGAGAAAGGGCAAAACTCAATGCGGCAACGGCTACATTAGGACGCACCGTGTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGt        >  4:206456‑M1/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                     ttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtgtccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgc                                                                                                                                   <  8:746619‑M1/148‑138 (MQ=255)
                                                                                                                                                                                                                                                                      TGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGa                                                                                                                                  >  5:563224‑M1/1‑148 (MQ=255)
                                                                                                                                                                                                                                                                      TGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATCCAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGCTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATTCAGTGGCAACGGGGGGCTATACAACCCCTTCGtttt     <  1:103716‑M1/273‑1 (MQ=255)
                                                                                                                                                                                                                                                                        GGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                                                                                                                                               >  6:191565‑M1/1‑85 (MQ=255)
                                                                                                                                                                                                                                                                         gagaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcaggggtatgcaacggaggatcatgctcatggattaccgtcaagatccacga  >  2:414793‑M1/1‑7 (MQ=255)
                                                                                                                                                                                                                                                                          AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaa                                                                                                                                                       <  8:95230‑M1/123‑1 (MQ=255)
                                                                                                                                                                                                                                                                          AGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGACTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaa                                                                                                                                                       >  7:95230‑M1/1‑123 (MQ=255)
                                                                                                                                                                                                                                                                           gaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatac                                                                                                                                                                        >  5:866561‑M1/1‑5 (MQ=255)
                                                                                                                                                                                                                                                                           gaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaag                                                                                                                                                                             >  5:711441‑M1/1‑5 (MQ=255)
                                                                                                                                                                                                                                                                             aGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgattta                                                                                                                           <  7:55017‑M1/148‑146 (MQ=255)
                                                                                                                                                                                                                                                                             AGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                                                                                                                                                                                                                 <  7:796684‑M1/62‑1 (MQ=255)
                                                                                                                                                                                                                                                                             AGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                                                                                                                                                                                                                 >  8:796684‑M1/1‑62 (MQ=255)
                                                                                                                                                                                                                                                                              GGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaaa                                                                                                                                                      <  3:144278‑M1/120‑1 (MQ=255)
                                                                                                                                                                                                                                                                               GAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAt                                                                                                                                                                                                 >  5:333959‑M1/1‑76 (MQ=255)
                                                                                                                                                                                                                                                                               GAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATAc                                                                                                                         <  8:1130553‑M1/148‑1 (MQ=255)
                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                          
GATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTAT  >  NC_000913/1207534‑1208071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.