New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1213722 =140 (0.890)8 (0.050) 7/252 NT 5.8% coding (338/732 nt) bluR repressor of blue light‑responsive genes
?NC_000913 1213743 = 129 (0.860)coding (317/732 nt) bluR repressor of blue light‑responsive genes

Only 100 of 174 total aligned reads displayed.

GGGCGCGGCGATTCAATGGGATCAGCAAGAACAGAAATGTGCCATCCTGACAATGATAAACGCCATGCTTCCAGCCACAATCGTGCTCTCTCTTCAACATTCCACGCCATCAGAATGGCTTCTTTACCGGGCTTACGGCGCATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAACGCTTGATCTCTTCGATGCGTTGTATGTCTTCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGCTGTGGTTTTAACAAACCGTAGCGGCGTTGC  >  NC_000913/1213449‑1213991
                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                             
taatcctttcactctccgggcctggcaacgccgctacggtttgttaaaaccacagcgcagtgaaggcggacaccgactctttgatgaagaagacatacaacgcatcgaagagatcaagcgttggataagtaatggcgtccctgtaggcaaagttaaagcattactggaaaccaccagccaggatacggaagatgactggagccgcctgcaagaagagatgatgtcaattcttcgcatggctaatcctgccaaactacgcgcgagaattatttcAc                                                                                                                                                                                                                                                                              >  1:126109‑M1/274‑275 (MQ=255)
     cggcgATTGAATGGGATCAGCAAGAACAGAAAGGTGCCATCCTGGAAATGTTAAACGCCATGCTTCCAGCCATCATCGTGCTCTCGCTTAAACATTCCACGCCATCAGAATGGCTTCTTTACCGGGCTTACGGCGCATTTCGAAAAGCGAGGTTGCTGCGTAGTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTggg                                                                                                                                                                                                                                                                          <  4:68125/274‑1 (MQ=255)
     cagcgATTCAATGGGATAAGCAAGAACAGAAATGTGCCATCCTGACAATGATAAACGCCATGCTTCCAGCCACAATCGTGCTCTCTCTTCAACATGCCACGCCATCAGAATGGCTTCTTTACCGGGCTTACGGCGCATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTggg                                                                                                                                                                                                                                                                          <  1:33334/272‑1 (MQ=255)
            tctccgggcctggcaacgccgctacggtttgttaaaaccacagcgcagtgaaggcggacaccgactctttgatgaagaagacatacaacgcatcgaagagatcaagcgttggataagtaatggcgtccctgtaggcaaagttaaagcattactggaaaccaccagccaggatacggaagatgactggagccgcctgcaagaagagatgatgtcaattcttcgcatggctaatcctgccaaactacgcgcgagaattatttcAc                                                                                                                                                                                                                                                                              >  2:534714‑M1/262‑263 (MQ=255)
                gggggTCAGCAAGAACAGAAATGTGCCATCCTGACAATGATAAACGCCCTGCTTCCAGCCACAATCGTGCTCTCTCTTCAACATTCCACGCCATCAGAATGGCTTCTTTACCGGGCTTACGGCGCATTACGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGAcc                                                                                                                                                                                                                                                               <  2:351709/273‑1 (MQ=255)
                                       ctccATCCTGACAATGATAAACGCCATGCTTCCAGCCACAATCGTGCTCTCTCTTCAACATTCCACGCCATCAGAATGTCTTCTTTACCGGGCGTACGGCGCATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAATGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAg                                                                                                                                                                                                                                       <  1:107733/273‑1 (MQ=255)
                                            tCCTGACAATGATAAACGCCATGCTTCCAGCCACAATCGTGCTCTCTCTTCAACATTCCACGCCATCAGAATGGCTTCTTTACCGGGCTTACGGCGCATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTg                                                                                                                                                                                                                                   >  2:422579/1‑274 (MQ=255)
                                                  cAATTATAAACGCCATGCTTCCAGCCACAATCGTGCTCTCTCTTCAACATTCCACGCCATCAGAATGGCTTCTTTACCGGGCTTACGGCGCATGTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGGGGTGTTGTGATCAAGCACGAGACGCTAGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGAt                                                                                                                                                                                                                            <  2:230195/275‑1 (MQ=255)
                                                     agcgcagtgaaggcggacaccgactctttgatgaagaagacatacaacgcatcgaagagatcaagcgttagataagtaatggcgtccctgtaggcaaagttaaagcattactggaaaccaccagcccggatacggaagatgactggagccgcctgcaagaagagatgatgtcaattcttcgcatggctaatcctgccaaactacgcgcgagaattatttcACTggg                                                                                                                                                                                                                                                                          <  2:94175‑M1/6‑1 (MQ=255)
                                                                 tGCTTCCAGCCACAATCGTGCTCTCTCTTCAACATTCCACGCCATCAGAATGGCTTCTTTACCGGGCTTACGGCGCATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATCATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCgaaaaa                                                                                                                                                                                                             >  4:225203/1‑275 (MQ=255)
                                                                 tGCTTCCAGCCACAATCGTGCTCTCTCTTCAACATTCCACGCCATCAGAATGGCTTCTTTACCGGGCTTACGGCGCATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCgaagaa                                                                                                                                                                                                             >  4:342301/1‑275 (MQ=255)
                                                                 tGCTTCCAGCCACAATCGTGCTCTCTCTTCAACATTCCACGCCATCAGAATGGCTTCTTTACCGGGCTTACGGCGCATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCgaagaa                                                                                                                                                                                                             >  2:332860/1‑275 (MQ=255)
                                                                   cTTCCAGCCACAATCGTGCTCTCTCTTCAACATTCCACGCCATCAGAATGGCTTCTTTACCGGGCTTACGGCGCATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAAtt                                                                                                                                                                                                           <  2:253002/275‑1 (MQ=255)
                                                                                          tctTCAACATTCCACGCCATCAGAATGGCTTCTTTACCGGGCTTACGGCGCATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTATTCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGGGTAGTTTGGCTGGATTAGCCATGCGAAGAATTGAca                                                                                                                                                                                                       >  2:525895/1‑256 (MQ=255)
                                                                                                      cACGCCATCAGAATGGCTTCTTTACCGGGCTTACGGCGCATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGGATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCa                                                                                                                                                                          >  2:119118/1‑273 (MQ=255)
                                                                                                          ctatacgAATGTCTTCTTACCCGGGGTTACGGCGCATTTCCAAAAGCGAGGTTGCTGCGTCTTCAATTACTGCGCCGTCAAACTGCCGGATCATAATGCGGGAGGTGTTGTGATCAAGAACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAAGTCTCGCGCGTAGGTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTcc                                                                                                                                                                    <  4:473615/269‑1 (MQ=255)
                                                                                                             tCAGAATGGCTTCTTTACCGGGCTTACGGCGCATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTa                                                                                                                                                                 >  2:144218/1‑275 (MQ=255)
                                                                                                                               cGGGCTTACGGCGCATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTAc                                                                                                                                                                                                                                                                              <  8:400356/148‑1 (MQ=255)
                                                                                                                                            cATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTa                                                                                                                                                                                                                                                                        <  7:262889/141‑1 (MQ=255)
                                                                                                                                            cATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCa                                                                                                                                                                                                                      >  4:132886/1‑191 (MQ=255)
                                                                                                                                            cATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCttt                                                                                                                                    >  2:404490/1‑273 (MQ=255)
                                                                                                                                               ttCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACt                                                                                                                                <  4:404489/274‑1 (MQ=255)
                                                                                                                                                tCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCg                                                                                                                                                                                                                  <  2:132887/191‑1 (MQ=255)
                                                                                                                                                      aGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGAGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTa                                                                                                                                                                                                                                                                        <  5:823397/131‑1 (MQ=255)
                                                                                                                                                                    gTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTAc                                                                                                          <  1:7903/275‑1 (MQ=255)
                                                                                                                                                                     tATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAgg                                                                                                                     <  2:172980/263‑1 (MQ=255)
                                                                                                                                                                      aTTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTgg                                                                                                                                                                                                                                                                           >  8:294742/1‑112 (MQ=255)
                                                                                                                                                                            accagccaggatacggaagatgactggagccgcctgcaagaagagatgatgtcaattcttcgcatggctaatcctgccaaactacgcgcgagaattatttcACTGGGTACTCTCGACCCa                                                                                                                                                                                                                                                             >  5:452035‑M1/102‑120 (MQ=255)
                                                                                                                                                                             tAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAAc                                                                                                 >  2:111822/1‑275 (MQ=255)
                                                                                                                                                                                 ccaggatacggaagatgactggagccgcctgcaagaagagatgatgtcaattcttcgcatggctaatcctgccaaactacgcgcgagaattatttcAc                                                                                                                                                                                                                                                                              <  6:926819‑M1/2‑1 (MQ=255)
                                                                                                                                                                                 ccaggatacggaagatgactggagccgcctgcaagaagagatgatgtcaattcttcgcatggctaatcctgccaaactacgcgcgagaattatttcAc                                                                                                                                                                                                                                                                              >  5:926819‑M1/97‑98 (MQ=255)
                                                                                                                                                                                    ccGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTATTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAACGCTTGAt                                                                                          >  4:111791/1‑275 (MQ=255)
                                                                                                                                                                                        cAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTAc                                                                                                                                                                                                                                                                              >  8:641063/1‑91 (MQ=255)
                                                                                                                                                                                          aaCATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTa                                                                                                                                                                                                                                                                               <  2:314016/88‑1 (MQ=255)
                                                                                                                                                                                          aaCATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTAc                                                                                                                                                                                                                                                                              >  5:709409/1‑89 (MQ=255)
                                                                                                                                                                                          aaCATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTAc                                                                                                                                                                                                                                                                              <  6:709409/89‑1 (MQ=255)
                                                                                                                                                                                          aaCATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCTAGTGAaataa                                                                                                                                                                                                                                                    <  7:652481/115‑1 (MQ=255)
                                                                                                                                                                                          aaCATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGc                                                                                                                                                                                                                   <  6:458683/148‑1 (MQ=255)
                                                                                                                                                                                           aCATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCg                                                                                                                                                                                                                  >  7:489998/1‑148 (MQ=255)
                                                                                                                                                                                            cATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAaataa                                                                                                                                                                                                                                                    <  8:26319/113‑1 (MQ=255)
                                                                                                                                                                                            cATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTa                                                                                                                                                                                                                          >  6:1092462/1‑139 (MQ=255)
                                                                                                                                                                                            cATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATg                                                                                                                                                                                                                    >  7:271505/1‑145 (MQ=255)
                                                                                                                                                                                              tACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAACGCTTGATCTCTTCGATg                                                                                <  2:342302/275‑1 (MQ=255)
                                                                                                                                                                                                 tGCTTATAATGCGGGGGGGGTTGTGATCAAGCACGGGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAACGCTTGATCTCTTCGATGCGt                                                                             <  4:173926/275‑1 (MQ=255)
                                                                                                                                                                                                 tGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTActc                                                                                                                                                                                                                                                                     >  6:349801/1‑91 (MQ=255)
                                                                                                                                                                                                 tGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTActc                                                                                                                                                                                                                                                                     <  5:349801/91‑1 (MQ=255)
                                                                                                                                                                                                 tGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTGGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAACGCTTGATCTCTTCGATGCGt                                                                             >  4:393145/1‑275 (MQ=255)
                                                                                                                                                                                                 tGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCttt                                                                                                                                    >  4:184436/1‑220 (MQ=255)
                                                                                                                                                                                                 tGCTAATAAGGCGGGAGGGGTTGTGATCAAGCACGAGAAGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAACGCTTGATCTATTCGATGCGt                                                                             <  4:422578/275‑1 (MQ=255)
                                                                                                                                                                                                    tCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATtc                                                                                                                                                                                                                                                 <  6:170493/108‑1 (MQ=255)
                                                                                                                                                                                                     cATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACt                                                                                                                                <  2:184437/220‑1 (MQ=255)
                                                                                                                                                                                                         aTGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGAtt                                                                                                                                                                                                                           <  8:1130468/125‑1 (MQ=255)
                                                                                                                                                                                                         aTGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAg                                                                                                                                                                                                                         <  7:343954/127‑1 (MQ=255)
                                                                                                                                                                                                            cGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTa                                                                                                                                                                                                                                                                               <  7:27331/70‑1 (MQ=255)
                                                                                                                                                                                                            cGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTa                                                                                                                                                                                                                                                                               >  8:27331/1‑70 (MQ=255)
                                                                                                                                                                                                             ggtatgtgtTTTTATCAAGCCCTACCCTCNNGCGCACATCACGGTAACCATTATTTATCAANTGGTCTACTGTGTACTCTCCACCCAGTGAAATACTTCTCGCGCTTAGTTTGGCAGTATTAGCCCTGCGAAGAATNGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAACGCTTGATCTCTTCGATGCGTTGTATGtcttct                                                                 <  3:56319/270‑1 (MQ=255)
                                                                                                                                                                                                             gggAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGACGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGGGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAAANNNTGATCTTTTCGATGTGTTGTATGtctttt                                                                 >  3:150743/1‑273 (MQ=255)
                                                                                                                                                                                                                 ggTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAACGCTTGATCTCTTCGATGCGTTGTATGTCTTCTtca                                                              >  4:397322/1‑274 (MQ=255)
                                                                                                                                                                                                                   tgttgtGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGAc                                                                                                                                                                                                                                                                >  8:909179/1‑78 (MQ=255)
                                                                                                                                                                                                                      tgtgATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATctct                                                                                                                                                                                               >  5:1067551/1‑140 (MQ=255)
                                                                                                                                                                                                                      tgtgATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATctct                                                                                                                                                                                               <  6:1067551/140‑1 (MQ=255)
                                                                                                                                                                                                                        gatgatgtcaattcttcgcatggctaatcctgccaaactacgcgcgagaattatttcACTGGGt                                                                                                                                                                                                                                                                         >  6:573017‑M1/58‑64 (MQ=255)
                                                                                                                                                                                                                        gatgatgtcaattcttcgcatggctaatcctgccaaactacgcgcgagaattatttcACTGGGt                                                                                                                                                                                                                                                                         <  5:573017‑M1/7‑1 (MQ=255)
                                                                                                                                                                                                                        gatgatgtcaattcttcgcatggctaatcctgccaaactacgcgcgagaattatttcACTGGGTACTCTCGACCCAGt                                                                                                                                                                                                                                                           <  6:521736‑M1/21‑1 (MQ=255)
                                                                                                                                                                                                                         gATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTgg                                                                                                                                                                                                                                  >  7:591259/1‑102 (MQ=255)
                                                                                                                                                                                                                         gATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTgg                                                                                                                                                                                                                                  <  8:591259/102‑1 (MQ=255)
                                                                                                                                                                                                                           tCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCgaaga                                                                                                                                                                                                              >  7:393398/1‑120 (MQ=255)
                                                                                                                                                                                                                           tCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCtctt                                                                                                                                                                                              >  6:324552/1‑136 (MQ=255)
                                                                                                                                                                                                                            cAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCt                                                                                                                                                                                 <  5:864417/148‑1 (MQ=255)
                                                                                                                                                                                                                             aaGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTACCTTTGCCTACAGGGACGCCATTACTTATCCAACGCTTGATCTCTTCGATGCGTTGTATGTCTTCTTCATCAAAGAGTCgg                                                  >  2:501250/1‑274 (MQ=255)
                                                                                                                                                                                                                               gCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAACGCTTGATCTCTTCGATGCTTTGTATGTCTTCTTCATCCAAAAGTCgttt                                                >  4:360792/1‑271 (MQ=255)
                                                                                                                                                                                                                                 aCGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGt                                                                                                                                                                            <  7:97901/148‑1 (MQ=255)
                                                                                                                                                                                                                                  attcttcgcatggctaatcctgccaaactacgcgcgagaattatttcACTGGGTACTCTCGACCCAGt                                                                                                                                                                                                                                                           <  5:1066579‑M1/21‑1 (MQ=255)
                                                                                                                                                                                                                                   gagaCGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCTATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTc                                                                                                                                                                                <  4:158680/142‑1 (MQ=255)
                                                                                                                                                                                                                                    tcttcgcatggctaatcctgccaaactacgcgcgagaattatttcACTGGGTACTCTCGACCCAGTGa                                                                                                                                                                                                                                                         <  6:911552‑M1/23‑1 (MQ=255)
                                                                                                                                                                                                                                           ggCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAACGCTTGATCTCTTCGATGCGTTGTATGTCTTCTTCATCAAAGAGTCGGTGTCCGCCTTCACTg                                   <  1:92671/275‑1 (MQ=255)
                                                                                                                                                                                                                                               aaCAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAg                                                                                                                                                                                                                         >  5:144510/1‑89 (MQ=255)
                                                                                                                                                                                                                                                    gAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATctct                                                                                                                                                                                               >  5:570326/1‑110 (MQ=255)
                                                                                                                                                                                                                                                     aaGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGa                                                                                                                                                                                                         <  5:489903/99‑1 (MQ=255)
                                                                                                                                                                                                                                                       ggTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCtggt                                                                                                                                                      <  5:338863/148‑1 (MQ=255)
                                                                                                                                                                                                                                                        gTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGaa                                                                                                                                                                                                                                                        >  8:364504/1‑49 (MQ=255)
                                                                                                                                                                                                                                                          aaaCATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTggtggt                                                                                                                                                   >  7:704059/1‑148 (MQ=255)
                                                                                                                                                                                                                                                              aTGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGtt                                                                                                                                                                                                                                     <  7:727273/62‑1 (MQ=255)
                                                                                                                                                                                                                                                              aTGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTcc                                                                                                                                               <  7:1141869/148‑1 (MQ=255)
                                                                                                                                                                                                                                                               tGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAg                                                                                                                                                                                       <  8:578600/107‑1 (MQ=255)
                                                                                                                                                                                                                                                                gATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAgg                                                                                                                     <  4:108218/172‑1 (MQ=255)
                                                                                                                                                                                                                                                                  ttAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCctggctgg                                                                                                                                                       >  6:382865/1‑136 (MQ=255)
                                                                                                                                                                                                                                                                   tAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTaa                                                                                                                                          >  8:623462/1‑148 (MQ=255)
                                                                                                                                                                                                                                                                   tAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTCTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTACAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTaa                                                                                                                                          <  8:704059/148‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aTCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATg                                                                                                                                        <  7:623462/148‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCa                                                                                                                                                                              <  6:855163/109‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTaa                                                                                                                                          >  6:681672/1‑145 (MQ=255)
                                                                                                                                                                                                                                                                      tCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTaa                                                                                                                                          <  5:681672/145‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tCAATTGATATACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCtctt                                                                                                                                                                                              >  8:739165/1‑93 (MQ=255)
                                                                                                                                                                                                                                                                       cAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAACGCTTGATCTCTTCGATGCGTTGTATGTCTTCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGCTGTGGTTTTAACAAACCGTAgcggc       <  2:393146/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                         aTTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTc                                                                                                                                                                     <  8:726198/115‑1 (MQ=255)
                                                                                                                                                                                                                                                                          ttGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACGTCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAACGCTTGATCTCTTCGATGCGTTGTATGTCTTCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGCTGTGGTTTTAACAAACCGTAGCGGCGtt    >  4:53464/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                             aTCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCAt                                                                                                                                                                                                                     >  7:900625/1‑63 (MQ=255)
                                                                                                                                                                                                                                                                              tCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACatcatc                                                                                                                                                                                                  <  5:205113/81‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 ACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATctct                                                                                                                                                                                               >  8:206320‑M1/1‑81 (MQ=255)
                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                             
GGGCGCGGCGATTCAATGGGATCAGCAAGAACAGAAATGTGCCATCCTGACAATGATAAACGCCATGCTTCCAGCCACAATCGTGCTCTCTCTTCAACATTCCACGCCATCAGAATGGCTTCTTTACCGGGCTTACGGCGCATTTCGAAAAGCGAGGTTGCTGCGTATTCAATTAATGCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTACAGGGACGCCATTACTTATCCAACGCTTGATCTCTTCGATGCGTTGTATGTCTTCTTCATCAAAGAGTCGGTGTCCGCCTTCACTGCGCTGTGGTTTTAACAAACCGTAGCGGCGTTGC  >  NC_000913/1213449‑1213991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.