New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1405665 =	61 (0.390)	8 (0.050)	8/248	NT	13.9%	noncoding (87/96 nt)	mcaS	motility and biofilm regulator sRNA
	?	NC_000913	1405694 =	42 (0.290)					noncoding (58/96 nt)	mcaS	motility and biofilm regulator sRNA

TGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACTGTGTTATAACGGTTTTAACCTTTAGTTGCCAATTTTCTTCAGTGACAGATTTCACGAAAATATAAGTTACAT  >  NC_000913/1405406‑1405827                                                                                                                                                                                                                                                                    |                                                                                                                                                                   tgtAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGCCGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATGTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTAGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAAAGCGGCTAACTGCAAAGTTAACACTGCCTAAAAAAAAAGAGTCTGTCGACac                                                                                                                                                     >  4:471194/1‑274 (MQ=255)     gTCTGCGAGACGTTGTCAGCCTGTTTCAGTCGTGTGGCAAAACGCGATTTTCTGCGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTTCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCg                                                                                                                                                  <  4:80003/274‑1 (MQ=255)      tCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGAGTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGcc                                                                                                                                                <  2:37833/275‑1 (MQ=255)            agagggttgctgCCTGTATAAGTCTGGGGGCAAAAAGCGATTTGCTCAGCAAAGTGCCTGAAGAAGTGGGTGGCGATCCCTTGCAGGGACGGGGGCTGGTGATGTTGCCGGTGAGCGAAAGTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACAGCACTGACCGCGTCATTAATCACGCAATTCCGGAGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGAct                                                                                                                                           <  4:96510/263‑1 (MQ=255)                  tctcAGCCTGTCTCACTCTGGTGTGAAAAAGCTATTTTCTCAGCAAACTGCCTGGAGAAATGGGCTGCGATCCCTTGNCCGGACAGGGGCTGGTGATGTTGCCGGTGAGCGAAATTTTACCGAAAGCGGCCGAGTATGTGATTCAGCGGCGGGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGt                                                                                                                                    <  3:131730/275‑1 (MQ=255)                       gCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTacaca                                                                                                                               <  2:383971/275‑1 (MQ=255)                           gttgcAGTCTCGGGGCAAAACTCTAGTTTTGCAGCAAACTGCCTGAAGAAATGTGCCGCGATCCCTTTACCGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGTAAGCGGCCTATTATTTGATTCAGGGGCGATATAGTCGCCAGAGTCCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAGAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACAcag                                                                                                                            <  4:211916/270‑1 (MQ=255)                           gTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTacac                                                                                                                                >  2:336617/1‑270 (MQ=255)                               cAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACAcag                                                                                                                            <  4:336616/270‑1 (MQ=255)                                       tggCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCcgc                                                                                                                <  2:56907/274‑1 (MQ=255)                                                 cGATTTTCTCAGGAAACTGCCTGAAGAAATGGGCTGAGAACCCTTGGACGGACAGGGGCTGGGGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGAGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATc                                                                                                      <  4:328289/274‑1 (MQ=255)                                                   aTTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGt                                                                                                                                                           >  1:121599/1‑219 (MQ=255)                                                         taaGCTAACTGCCGAGAGAAATGGGCTGAGAGCCCTTGGACGGACACGGGCTGTTGATGTAGCCTGTTAGCGAAATTTTACCACGAGCGGCGTAATATTTGATGCAGCGGCGTGATAGTCTCCAGACACCACGTGCCGCGTCATTAATCACTCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAGAACGGCATAAAAAAATAGAGGCTGTAGACATCCGCCAGACTCTACAGGACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGt                                                                                             <  4:57262/273‑1 (MQ=255)                                                                      tGAAGAAATGGGCTGCGATCCCTTGCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCg                                                                                <  2:203972/275‑1 (MQ=255)                                                                                   tGCGATCCCTTGCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGa                                                                                                                                             >  4:487737/1‑201 (MQ=255)                                                                                       aTCCCTTGCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGActct                                                                                                                                         <  2:487738/201‑1 (MQ=255)                                                                                               cACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACa                                                                                                                                                      >  4:442674/1‑180 (MQ=255)                                                                                                   gACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCg                                                                                                                                                  <  2:442675/180‑1 (MQ=255)                                                                                                    aCAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGt                                                                                                                                                               >  1:160198/1‑166 (MQ=255)                                                                                                        gggCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGt                                                                                                                                                           <  3:160198/166‑1 (MQ=255)                                                                                                                 aTGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAAt                                                                                                                                                                    <  7:560398/148‑1 (MQ=255)                                                                                                                                     tttACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAAt                                                                                                                                                                    <  5:413224/128‑1 (MQ=255)                                                                                                                                     tttACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAAt                                                                                                                                                                    >  6:413224/1‑128 (MQ=255)                                                                                                                                      ttACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCAAGACACCCCTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACTGTGTTATAACGGTTTTAACCTTTAGTTGCCAATTTTCTTCAGTGACAGATTTCACGa                 <  4:393930/274‑1 (MQ=255)                                                                                                                                       atattttcgtgaaatctgtcactgaagaaaattggcaactaaaggttaaaaccgttataacacagtcaccggcgcagaggagacaatgccggatttaagacgcggatgcactgctgtgtgtactgTAGAGt                                                                                                                                                               <  1:152284‑M1/6‑1 (MQ=255)                                                                                                                                                   ccTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTac                                                                                                                                  >  5:181171/1‑148 (MQ=255)                                                                                                                                                    cTATTATTTGATTCACCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACTGTGTTATAACGGTTTTAACCTTTAGTTGCCAATTTTCTTCAGTGACAGATTTCACGAAAATATAAGTTACat  <  2:471195/275‑1 (MQ=255)                                                                                                                                                     tattatTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGt                                                                                                                                                           <  8:427668/121‑1 (MQ=255)                                                                                                                                                     tattatTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGt                                                                                                                                                           >  7:427668/1‑121 (MQ=255)                                                                                                                                                      attattTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGAct                                                                                                                                           <  8:65473/136‑1 (MQ=255)                                                                                                                                                      attattTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGAct                                                                                                                                           >  7:65473/1‑136 (MQ=255)                                                                                                                                                           ttGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATagag                                                                                                                                                                >  6:628202/1‑110 (MQ=255)                                                                                                                                                           ttGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATagag                                                                                                                                                                <  5:628202/110‑1 (MQ=255)                                                                                                                                                            tGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACAcagcag                                                                                                                         <  6:181171/148‑1 (MQ=255)                                                                                                                                                             tgaagaaaattggcaactaaaggttaaaaccgttataacacagtcaccggcgcagaggagacaatgccggatttaagacgcggatgcactgctgtgtgtactgTAGAGTCTGTCGACATCCGCCAGAc                                                                                                                                            <  6:990851‑M1/25‑1 (MQ=255)                                                                                                                                                             tgaagaaaattggcaactaaaggttaaaaccgttataacacagtcaccggcgcagaggagacaatgccggatttaagacgcggatgcactgctgtgtgtactgTAGAGTCTGTCGACATCCGCCAGAc                                                                                                                                            >  5:990851‑M1/104‑128 (MQ=255)                                                                                                                                                                tCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAAt                                                                                                                                                                    <  6:414259/101‑1 (MQ=255)                                                                                                                                                                tCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAAt                                                                                                                                                                    >  5:414259/1‑101 (MQ=255)                                                                                                                                                                agaaaattggcaactaaaggttaaaaccgttataacacagtcaccggcgcagaggagacaatgccggatttaagacgcggatgcactgctgtgtgtactgTag                                                                                                                                                                  <  6:1096128‑M1/3‑1 (MQ=255)                                                                                                                                                                agaaaattggcaactaaaggttaaaaccgttataacacagtcaccggcgcagaggagacaatgccggatttaagacgcggatgcactgctgtgtgtactgTag                                                                                                                                                                  >  5:1096128‑M1/101‑103 (MQ=255)                                                                                                                                                                   gcggcgTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATcc                                                                                                                  >  5:1091647/1‑148 (MQ=255)                                                                                                                                                                       cgTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGt                                                                                                              <  6:1091647/148‑1 (MQ=255)                                                                                                                                                                                   gttaaaaccgttataacacagtcaccggcgcagaggagacaatgccggatttaagacgcggatgcactgctgtgtgtactgTAGAGTCTGTCGACATCCGCCAGa                                                                                                                                             <  7:603196‑M1/24‑1 (MQ=255)                                                                                                                                                                                   gttaaaaccgttataacacagtcaccggcgcagaggagacaatgccggatttaagacgcggatgcactgctgtgtgtactgTAGAGTCTGTCGACATCCGCCAGa                                                                                                                                             >  8:603196‑M1/82‑105 (MQ=255)                                                                                                                                                                                     gACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGt                                                                                                                                    >  7:1088413/1‑112 (MQ=255)                                                                                                                                                                                     gACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGt                                                                                                                                    <  8:1088413/112‑1 (MQ=255)                                                                                                                                                                                         ccacTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATc                                                                                                      <  5:891919/138‑1 (MQ=255)                                                                                                                                                                                         ccacTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATc                                                                                                      >  6:891919/1‑138 (MQ=255)                                                                                                                                                                                           acTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCcgcg                                                                                                               <  6:142464/127‑1 (MQ=255)                                                                                                                                                                                           acTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCcgcg                                                                                                               >  5:142464/1‑127 (MQ=255)                                                                                                                                                                                             tGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAAt                                                                                                                                                                    >  5:967847/1‑72 (MQ=255)                                                                                                                                                                                             tGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAAt                                                                                                                                                                    <  6:967847/72‑1 (MQ=255)                                                                                                                                                                                                ccGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAAt                                                                                                                                                                    >  7:884945/1‑69 (MQ=255)                                                                                                                                                                                                ccGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAAt                                                                                                                                                                    <  8:884945/69‑1 (MQ=255)                                                                                                                                                                                                   cgTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCGGCGTCTTAAATCCGGc                                                                                                  >  8:544978/1‑132 (MQ=255)                                                                                                                                                                                                   cgTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCGGCGTCTTAAATCCGGc                                                                                                  <  7:544978/132‑1 (MQ=255)                                                                                                                                                                                                   cgTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTgcgc                                                                                  >  7:395928/1‑148 (MQ=255)                                                                                                                                                                                                   cacagtcaccggcgcagaggagacaatgccggatttaagacgcggatgcactgctgtgtgtactgTAGAGTCTGTCGACATCCGCCAGACTCTAc                                                                                                                                       >  8:722441‑M1/66‑95 (MQ=255)                                                                                                                                                                                                   cacagtcaccggcgcagaggagacaatgccggatttaagacgcggatgcactgctgtgtgtactgTAGAGTCTGTCGACATCCGCCAGACTCTAc                                                                                                                                       <  7:722441‑M1/30‑1 (MQ=255)                                                                                                                                                                                                    gTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAg                                                                                                                                     >  3:81979/1‑96 (MQ=255)                                                                                                                                                                                                        ttAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTaca                                                                                                                                 <  1:81979/96‑1 (MQ=255)                                                                                                                                                                                                        ttAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTg                                                                             >  6:70950/1‑148 (MQ=255)                                                                                                                                                                                                         caccggcgcagaggagacaatgccggatttaagacgcggatgcactgctgtgtgtactgt                                                                                                                                                                    <  6:357616‑M1/1‑1 (MQ=255)                                                                                                                                                                                                         caccggcgcagaggagacaatgccggatttaagacgcggatgcactgctgtgtgtactgt                                                                                                                                                                    >  5:357616‑M1/60‑60 (MQ=255)                                                                                                                                                                                                            tCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACtg                                                                         <  5:70950/148‑1 (MQ=255)                                                                                                                                                                                                               cGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAg                                                                                                                                              <  7:773481/76‑1 (MQ=255)                                                                                                                                                                                                               cGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCt                                                                                                            >  6:396983/1‑110 (MQ=255)                                                                                                                                                                                                               cGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCt                                                                                                            <  5:396983/110‑1 (MQ=255)                                                                                                                                                                                                               cGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACTgtgt                                                                      >  6:411545/1‑148 (MQ=255)                                                                                                                                                                                                               cGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGGTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAg                                                                                                                                              >  8:773481/1‑76 (MQ=255)                                                                                                                                                                                                                   aTTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACTGTGTtata                                                                  <  5:411545/148‑1 (MQ=255)                                                                                                                                                                                                                   aTTCCGGCGAGAATGCGGCTATCCGCAAAGTTAAAACTGCATAAAAAAATag                                                                                                                                                                  >  5:955353/1‑52 (MQ=255)                                                                                                                                                                                                                   aTTCCGACGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATag                                                                                                                                                                  <  6:955353/52‑1 (MQ=255)                                                                                                                                                                                                                         gCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGActc                                                                                                                                          >  3:95012/1‑70 (MQ=255)                                                                                                                                                                                                                             gaATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACa                                                                                                                                      <  1:95012/70‑1 (MQ=255)                                                                                                                                                                                                                                cggatttaagacgcggatgcactgctgtgtgtactgTAGAGTCTGTCGACATCCGcc                                                                                                                                                <  6:307601‑M1/21‑1 (MQ=255)                                                                                                                                                                                                                                cggatttaagacgcggatgcactgctgtgtgtactgTAGAGTCTGTCGACATCCGcc                                                                                                                                                >  5:307601‑M1/37‑57 (MQ=255)                                                                                                                                                                                                                                    gCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACtgtg                                                                       >  6:354869/1‑126 (MQ=255)                                                                                                                                                                                                                                    gCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACtgtg                                                                       <  5:354869/126‑1 (MQ=255)                                                                                                                                                                                                                                         cTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTg                                                                             >  5:554952/1‑115 (MQ=255)                                                                                                                                                                                                                                         cTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTg                                                                             <  6:554952/115‑1 (MQ=255)                                                                                                                                                                                                                                            cAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGAc                                                                                                                                            <  6:601097/49‑1 (MQ=255)                                                                                                                                                                                                                                            cAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGAc                                                                                                                                            >  5:601097/1‑49 (MQ=255)                                                                                                                                                                                                                                            cAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACTGTGTTATAACgg                                                              >  5:243336/1‑127 (MQ=255)                                                                                                                                                                                                                                            cAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACTGTGTTATAACgg                                                              <  6:243336/127‑1 (MQ=255)                                                                                                                                                                                                                                                 ttAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACTGTGTTATAACGGTTTTAACCTTTAGTTGCCAATTttct                                    <  8:395928/148‑1 (MQ=255)                                                                                                                                                                                                                                                       cTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACTGTGTTATAACGGTTTTAACCTTTAGTTGCCAATTTTCTTCAGTg                              >  5:843559/1‑148 (MQ=255)                                                                                                                                                                                                                                                               aaaaaTAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCAtt                                                                                               >  7:760049/1‑75 (MQ=255)                                                                                                                                                                                                                                                               aaaaaTAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCAtt                                                                                               <  8:760049/75‑1 (MQ=255)                                                                                                                                                                                                                                                                  aaTAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACTGTGTTATAACGGTTTTAACCTTTAGTTGCCAAttt                                       >  7:882815/1‑128 (MQ=255)                                                                                                                                                                                                                                                                  aaTAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACTGTGTTATAACGGTTTTAACCTTTAGTTGCCAAttt                                       <  8:882815/128‑1 (MQ=255)                                                                                                                                                                                                                                                                    |                                                                                                                                                                   TGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAAAACTGCATAAAAAAATAGAGTCTGTCGACATCCGCCAGACTCTACAGTACACACAGCAGTGCATCCGCGTCTTAAATCCGGCATTGTCTCCTCTGCGCCGGTGACTGTGTTATAACGGTTTTAACCTTTAGTTGCCAATTTTCTTCAGTGACAGATTTCACGAAAATATAAGTTACAT  >  NC_000913/1405406‑1405827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.