New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1745893 =144 (0.910)8 (0.050) 8/248 NT 5.9% coding (235/1257 nt) ydhQ autotransporter adhesin‑related protein
?NC_000913 1745928 = 123 (0.840)coding (200/1257 nt) ydhQ autotransporter adhesin‑related protein

Only 100 of 175 total aligned reads displayed.

CTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCGCCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTCCCGTCGCTCATCAAGTTTTTCGCATCAGATCCCATGATTTATTCCTTTGCTGCATCTGTGTGCCTTTATTG  >  NC_000913/1745632‑1746163
                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                              
          caacaaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCGCCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCAAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATAGCTGACCGAt                                                                                                                                                                                                                                                          >  2:450540/1‑275 (MQ=255)
              aaTTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCTCATTAACCAACAGGCCGCCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTCTCTCAACGCTGAATTCACCTTCGGGCTGGCGGCAATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGACT‑CCCTCGGCCTGAACAATCTTTGTGTCAATGACAACATCGCTGACCGCTAGCGt                                                                                                                                                                                                                                                     >  1:145953/1‑275 (MQ=255)
                      accTTCATCTACCACGACCGCTGGGGTTGTCCCATTAACCAACAGGTCGCCCTCTTGATCGGGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGt                                                                                                                                                                                                                                             <  2:241144/275‑1 (MQ=255)
                      accTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCGCCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCAc                                                                                                                                                                                                                                                                        <  2:206287/248‑1 (MQ=255)
                             tCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCGCCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATCGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTa                                                                                                                                                                                                                                      <  2:481857/275‑1 (MQ=255)
                                                                     cgccCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGTTGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCCTTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCaa                                                                                                                                                                                               >  4:498953/1‑274 (MQ=255)
                                                                     cgaccTCTTGATCGTGAATGTTTTTTTCCGCGCGTCTGCCTTCCGCCACACGCAGGTTACGGCCATTTTCCAGCAACAATCCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCAGTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGCACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAAc                                                                                                                                                                                              <  4:503941/272‑1 (MQ=255)
                                                                                    gaATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCCCCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCCTTTGGCGATCCCACCGGTTGCCAC‑TTCAAcccccccccccccc                                                                                                                                                                                 >  4:165072/1‑260 (MQ=255)
                                                                                      aTGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCATCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGAGCCT‑ACCTCGGACTGAACAATATATGTGGCAAGGGCACCATCGCTGACGGATATCGTGCCATTGTTACAGTACTGTGTGCATTTGGCGATCCCAACGGTTTCCACTTTCAACCAGCCAGACCCCGTGa                                                                                                                                                                              >  2:372368/1‑274 (MQ=255)
                                                                                                   cgcgATGTCCTTCCAGTACACGCAGATTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTCACCGTAGCGAGCGTAGAGAGACTACTTCCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGTTAGCGGACCATGGTTTCCGTACTCTGTGCATTTGGCCCTCCCCCCGGTACCCCCTTTAAACCTACACGCCCCCGGCACCCCGGTATTTTCg                                                                                                                                                                >  4:1386/1‑275 (MQ=255)
                                                                                                                    accggcgaggtcattggcgcgacgcaacttactgaaggcgagttgattgttgaagctggcggaagagccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCa                                                                                                                                                                                                                                                                               <  6:1044137‑M1/2‑1 (MQ=255)
                                                                                                                    accggcgaggtcattggcgcgacgcaacttactgaaggcgagttgattgttgaagctggcggaagagccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCa                                                                                                                                                                                                                                                                               <  6:1077677‑M1/2‑1 (MQ=255)
                                                                                                                    acacGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTTGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTCCTGTGTGCANTTTGCGATCCCACCGGTTGCCACTTTCAAACACCCGACCCCCGTGACCACGGTATTTTCGGCTCCTCCCCCACCtc                                                                                                                                                >  3:127552/1‑273 (MQ=255)
                                                                                                                    acacGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACCGAACAATATCTGTGGCaa                                                                                                                                                                                                                                                                              <  8:718103/148‑1 (MQ=255)
                                                                                                                            gTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCa                                                                                                                                                                                                                                                                      <  7:450846/148‑1 (MQ=255)
                                                                                                                                 cGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGt                                                                                                                                                                                                                                             <  2:154147/168‑1 (MQ=255)
                                                                                                                                  gCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTg                                                                                                                                                                                                                                                                >  7:1096304/1‑148 (MQ=255)
                                                                                                                                  gCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTg                                                                                                                                                                                                                                                                <  8:1096304/148‑1 (MQ=255)
                                                                                                                                  agcATTTTCCAGCCACAAACCTCAGGCATAACCCTTAGCAACGCTTAATTCCCCTTCGGGATCGCGGCCAGTAACCGTCGCGGTCGTAGAGAGACTAATTGCGCCT‑ACCTCGGACTGAACAATTTCTGTTGCAATGGCACCAGCGCTGACCGATAGCGTTCCATTGTTCCCGTACTGTGTGCCTTTGGCGATCCCACCGGTTGCCACTTTCACCCAGCCAGCCCCCGGGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAGTCAACTCGc                                                                                                                                 <  4:61884/273‑1 (MQ=255)
                                                                                                                                   ccATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGa                                                                                                                                                                                                                                                               >  8:755753/1‑148 (MQ=255)
                                                                                                                                    cATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGAc                                                                                                                                                                                                                                                              <  7:755753/148‑1 (MQ=255)
                                                                                                                                     aTTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCa                                                                                                                                                                                                                                                                         >  5:365007/1‑136 (MQ=255)
                                                                                                                                     aTTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCa                                                                                                                                                                                                                                                                         <  6:365007/136‑1 (MQ=255)
                                                                                                                                     aTTATCAAGCAACAAACCGCAGGCATAACCCTTAGAAAACGTAAAGTCACCTGCGGGGTGGCGGCCAGTAACCGTAGCGAGCGTAGCGGGACAGTATTAGCCT‑GCCGCGGACTGATCAAAATCTGTGGCAATGGGACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCGGCCAGCCCCCGTAACCACGGAAGTTTCGGCTCTTCCGCCAGCTTCAGCAATCGACTCGCCtt                                                                                                                              <  4:403015/275‑1 (MQ=255)
                                                                                                                                         acgcaacttactgaaggcgagttgattgttgaagctggcggaagagccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCAATGGCACCATCGCTGACCGAt                                                                                                                                                                                                                                                          >  6:455981‑M1/126‑148 (MQ=255)
                                                                                                                                               aacaaACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGc                                                                                                                                                                                                                                                   <  7:1096760/148‑1 (MQ=255)
                                                                                                                                                  aaaCCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCAt                                                                                                                                                                                                                                                <  7:215521/148‑1 (MQ=255)
                                                                                                                                                    aCCGCAAGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTcg                                                                                                               <  2:165073/275‑1 (MQ=255)
                                                                                                                                                     gaaggcgagttgattgttgaagctggcggaagagccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCaa                                                                                                                                                                                                                                                                              <  8:970487‑M1/3‑1 (MQ=255)
                                                                                                                                                     gaaggcgagttgattgttgaagctggcggaagagccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCaa                                                                                                                                                                                                                                                                              >  7:970487‑M1/114‑116 (MQ=255)
                                                                                                                                                     gaaggcgagttgattgttgaagctggcggaagagccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCAATGGCACCATCGCTGACCGATAGCGTGCCATTg                                                                                                                                                                                                                                              >  5:223549‑M1/114‑148 (MQ=255)
                                                                                                                                                         aGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGATCTTCCGCCCGCTTAAACAATCAACTCCCCTTCAGTAAGTTGCGCTGCGCCa                                                                                                          >  4:516816/1‑275 (MQ=255)
                                                                                                                                                            cATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCaa                                                                                                                                                                                                                                                                              >  6:804954/1‑108 (MQ=255)
                                                                                                                                                            cATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCaa                                                                                                                                                                                                                                                                              <  5:804954/108‑1 (MQ=255)
                                                                                                                                                               aaCCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGa                                                                                                                                                                                                                                                               >  8:896914/1‑120 (MQ=255)
                                                                                                                                                               aaCCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGa                                                                                                                                                                                                                                                               <  7:896914/120‑1 (MQ=255)
                                                                                                                                                                  cTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATg                                                                                                                                                                                                                                                                            <  5:961542/104‑1 (MQ=255)
                                                                                                                                                                    ttATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGcc                                                                                               <  2:528789/275‑1 (MQ=255)
                                                                                                                                                                     tATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCAcc                                                                                                                                                                                                                                                                       >  1:24703/1‑106 (MQ=255)
                                                                                                                                                                     tATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGcc                                                                                               >  2:294213/1‑274 (MQ=255)
                                                                                                                                                                     tATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCCCGCCAATGACCTCGcc                                                                                               >  2:447232/1‑274 (MQ=255)
                                                                                                                                                                         aaCGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCg                                                                                                                                                                                                                                                                   <  3:24703/106‑1 (MQ=255)
                                                                                                                                                                           cGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACAATCGCTGACCGATAGCGTGCCATTGTTCCCGTACTGTGTGCATTTGGCGATCCTACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCCAGTCCGCCAGCTTCCACAAACAACCCGCCTTCAGTACGTTGCGTCGCGCCAATGACCTccaacgtctt                                                                                         >  4:404758/1‑265 (MQ=255)
                                                                                                                                                                            gCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTg                                                                                                                                                                                                                                                    >  1:148557/1‑118 (MQ=255)
                                                                                                                                                                            gCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCAACCGGTTGCCACt                                                                                                                                                                                                    >  4:21093/1‑166 (MQ=255)
                                                                                                                                                                               gAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATc                                                                                                                                                                                                                   <  7:878302/148‑1 (MQ=255)
                                                                                                                                                                                aaTTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGAc                                                                                                                                                                                                                                                              <  5:726520/104‑1 (MQ=255)
                                                                                                                                                                                 aTTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATccc                                                                                                                                                                                                                 <  5:594690/148‑1 (MQ=255)
                                                                                                                                                                                   tCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACGAATTGCGCCT‑CCCTCGGACTGAAAAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTg                                                                                <  2:1386/275‑1 (MQ=255)
                                                                                                                                                                                      gccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCAATGGCACCATCGCTGACCGATAGCGTGCCAt                                                                                                                                                                                                                                                <  6:175750‑M1/33‑1 (MQ=255)
                                                                                                                                                                                      gccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCAATGGCACCATCGCTGACCGATAGCGTGCCAt                                                                                                                                                                                                                                                >  5:175750‑M1/81‑113 (MQ=255)
                                                                                                                                                                                        ttCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGtt                                                                                                                                                                                                          >  5:82906/1‑148 (MQ=255)
                                                                                                                                                                                         tCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTg                                                                                                                                                                                                         <  7:162778/148‑1 (MQ=255)
                                                                                                                                                                                              aTGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACtg                                                                                                                                                                                                                                   >  8:821614/1‑117 (MQ=255)
                                                                                                                                                                                                 gcggcCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCCATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTCCCGTCg                                                                   >  2:104751/1‑274 (MQ=255)
                                                                                                                                                                                                    gcCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCg                                                                                                                                                                                                                                                      <  6:818733/92‑1 (MQ=255)
                                                                                                                                                                                                             cGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTgg                                                                                                                                                                                                                        >  8:512683/1‑113 (MQ=255)
                                                                                                                                                                                                               tAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGcccc                                                                                                                                                                                   >  6:516983/1‑148 (MQ=255)
                                                                                                                                                                                                                    agcgTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCTGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTCCCGTCGCTCATCAAGTTTTTCGCATc                                               <  4:201027/275‑1 (MQ=255)
                                                                                                                                                                                                                      cgTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTCCCGTCGCTCATCAAGTTTTTCGCATCAg                                             >  2:364937/1‑275 (MQ=255)
                                                                                                                                                                                                                          gagagaCTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGAt                                                                                                                                                                                                                    >  6:122475/1‑104 (MQ=255)
                                                                                                                                                                                                                          gagagaCTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGAt                                                                                                                                                                                                                    <  5:122475/104‑1 (MQ=255)
                                                                                                                                                                                                                          gagagaCTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGAt                                                                                                                                                                                                                    >  8:120681/1‑104 (MQ=255)
                                                                                                                                                                                                                           agagaCTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTg                                                                                                                                                                                                                         <  6:316502/98‑1 (MQ=255)
                                                                                                                                                                                                                           agagaCTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTg                                                                                                                                                                                                                         >  5:316502/1‑98 (MQ=255)
                                                                                                                                                                                                                               aCTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCa                                                                                                                                                                                                      <  8:542958/113‑1 (MQ=255)
                                                                                                                                                                                                                               aCTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCa                                                                                                                                                                                                      >  6:73481/1‑113 (MQ=255)
                                                                                                                                                                                                                               aCTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCa                                                                                                                                                                                                      <  5:73481/113‑1 (MQ=255)
                                                                                                                                                                                                                               aCTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTCCCGTCGCTCATCAAGTTTTTCGCATCAGATCCCa                                       >  2:271730/1‑272 (MQ=255)
                                                                                                                                                                                                                                gcaaccggtgggatcgccaaatgcacacagtacggtaaCAATGGCACCATCGCTGACCGATAGCGTGcc                                                                                                                                                                                                                                                  >  6:578759‑M1/39‑69 (MQ=255)
                                                                                                                                                                                                                                cTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCg                                                                                                                                                                                                                                                      >  6:628291/1‑64 (MQ=255)
                                                                                                                                                                                                                                cTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTAtt                                                                                                                                                                    <  6:944498/146‑1 (MQ=255)
                                                                                                                                                                                                                                cTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTAtt                                                                                                                                                                    >  5:2043/1‑146 (MQ=255)
                                                                                                                                                                                                                                cTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTAtt                                                                                                                                                                    >  5:944498/1‑146 (MQ=255)
                                                                                                                                                                                                                                cTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTAtt                                                                                                                                                                    <  6:2043/146‑1 (MQ=255)
                                                                                                                                                                                                                                 tAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCagccagcc                                                                                                                                                                                     >  7:11508/1‑128 (MQ=255)
                                                                                                                                                                                                                                 tAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCagccagcc                                                                                                                                                                                     <  8:11508/128‑1 (MQ=255)
                                                                                                                                                                                                                                  aaTTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCAtt                                                                                                                                                                                                                                               >  6:113521/1‑69 (MQ=255)
                                                                                                                                                                                                                                   aTTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACtgtg                                                                                                                                                                                                                                 >  5:333787/1‑82 (MQ=255)
                                                                                                                                                                                                                                     tGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACtgtg                                                                                                                                                                                                                                 <  7:780033/80‑1 (MQ=255)
                                                                                                                                                                                                                                     tGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACtgtg                                                                                                                                                                                                                                 >  8:780033/1‑80 (MQ=255)
                                                                                                                                                                                                                                     tGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACttt                                                                                                                                                                                                  >  7:648366/1‑111 (MQ=255)
                                                                                                                                                                                                                                        gcCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCAACGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACt                                                                                                                                                                                                    >  6:331168/1‑106 (MQ=255)
                                                                                                                                                                                                                                          ct‑ccctcGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTCCCGTCGCTCATCAAGTTTTTCGCATCAGATCCCATGATTTATTCCtt                          <  4:364936/274‑1 (MQ=255)
                                                                                                                                                                                                                                           t‑ccctcGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCa                                                                                                                                                                                                >  7:522161/1‑107 (MQ=255)
                                                                                                                                                                                                                                               ctcGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTAt                                                                                                                                                                     >  7:590537/1‑131 (MQ=255)
                                                                                                                                                                                                                                               ctcGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTAt                                                                                                                                                                     <  8:590537/131‑1 (MQ=255)
                                                                                                                                                                                                                                               ctcGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCa                                                                                                                                                    >  6:885732/1‑148 (MQ=255)
                                                                                                                                                                                                                                                       gAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTcaac                                                                                                                                            >  5:1044137/1‑148 (MQ=255)
                                                                                                                                                                                                                                                       gAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTcaac                                                                                                                                            >  5:1077677/1‑148 (MQ=255)
                                                                                                                                                                                                                                                        aaCAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACCATTTGCACGTTCCCGTCGCTCATCAAGTTTTTCGCATCAGATCCCATGATTTATTCCTTTGCTGCATCtttg             >  2:411933/1‑274 (MQ=255)
                                                                                                                                                                                                                                                         aCAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTcaacaa                                                                                                                                          <  5:516983/148‑1 (MQ=255)
                                                                                                                                                                                                                                                          cAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGt                                                                                                                                                                                                           >  5:1125457/1‑82 (MQ=255)
                                                                                                                                                                                                                                                             tatCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCaa                                                                                                                                      >  7:198031/1‑148 (MQ=255)
                                                                                                                                                                                                                                                             tatCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTCCCGTCGCTAATCAAGTTTTTCGCATCAGGTCCCATGATTTATTCCTTTGCTTCATCTTTGTGCCtt       >  2:380519/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                  gtgGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTCCCGTCGCTCATCAAGTTTTTCGCATCAGATCCCATGATTTATTCCTTTGCTTCCTCTGTTTGCCTTTATTg  >  4:475110/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                  gtgGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTCCCGTCGCTCATCAAGTTTTTCGCATCAGATCCCATGATTTATTCCTTTGCTGCATCTGTGTGCCTTTATTg  <  2:498954/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                   gggCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACGGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGGGACCACTGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTCCCGTCGCTCATCAAGTTTTTCGCATCAGATCCCATGATTTATTCCTTTGCTGCATCTGTGTGCCTTTATTg  <  2:404759/273‑1 (MQ=255)
                                                                                                                                                                                                                                                                    ggCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGa                                                                                                                                                                              <  8:17774/101‑1 (MQ=255)
                                                                                                                                                                                                                                                                      CAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCa                                                                                                                                       >  5:443043‑M1/1‑138 (MQ=255)
                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                              
CTGGATACACCAACAATTCACCACCTTCATCTACCACGACCGCTGAGGTTGTCCCATTAACCAACAGGCCGCCCTCTTGATCGAGAATGATTTTTTCCGCGCGATGTCCTTCCAGTACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCT‑CCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTCAGTAAGTTGCGTCGCGCCAATGACCTCGCCGGTCTTAACAATTTGCACGTTCCCGTCGCTCATCAAGTTTTTCGCATCAGATCCCATGATTTATTCCTTTGCTGCATCTGTGTGCCTTTATTG  >  NC_000913/1745632‑1746163

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.