New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2327300 =84 (0.530)10 (0.070) 7/240 NT 12.3% intergenic (+7/+67) atoB/yfaP acetyl‑CoA acetyltransferase/DUF2135 family protein, putative host defense protein
?NC_000913 2327334 = 67 (0.470)intergenic (+41/+33) atoB/yfaP acetyl‑CoA acetyltransferase/DUF2135 family protein, putative host defense protein

Only 100 of 119 total aligned reads displayed.

TATTGATCTCATTGAGGCTAATGAAGCATTTGCTGCACAGTTCCTTGCCGTTGGGAAAAACCTGGGCTTTGATTCTGAGAAAGTGAATGTCAACGGCGGGGCCATCGCGCTCGGGCATCCTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGCCCACCATAGTAGTTGATATACACCTGATAGCGCCCGTGAATTGGCGCGGGCATGGCGAAAA  >  NC_000913/2327038‑2327566
                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                          
ggatgtcacgacggggtacggacccgagattttcgccatgcccgcgccaattcacgggcgctatcaggtgtatatcaactactatggtgggcgcagcgaaacggaattaaccaccgcccaactgacgctgatcaccgatgaaggatcggtcaatgagaaacaggaaacatttattgtaccgatgcgtaatgctggcgagctgacgctggtgaaaagttttgactggtgattaatggggttaccttcgccgtcgatgttcaagAAAACACCCGATa                                                                                                                                                                                                                                                                <  4:313229‑M1/13‑1 (MQ=255)
          aTTGAGGCTAATGAAGCATTTGCTGCACAGTTCCTTGCCGTTGGGAAAAACCTGGGCTTTGATTCTGAGCAAGTGAATGTCAACGGCGGGGCCATCGCGCTCGGGCATCCTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTa                                                                                                                                                                                                                                                      >  2:104287/1‑275 (MQ=255)
          aTTGAGGCTAATGAAGCATTTGCTGCACAGTTCCTTGCCGTTGGGAAAAACCTGGGCTTTGATTCTGAGAAAGTGAATGTCAACGGCGGGGCCATCGCGCTCGGGCATCCTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTa                                                                                                                                                                                                                                                      >  1:130572/1‑275 (MQ=255)
                    aTGAATCATTTGCTGCACAGTTCCTTGCCGTTGGGAAAAACCTGGGCTTTGATTCTGAGAAAGTGAATGTCAACGGCGGGGCCATCGCGCTCGGGCATCCTATCGGTGCCAGTGGTGCTCGTCTTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTTGGGCTGGCCACACTTTGCATTGGCGGCGGTCAGGGAATTTCGATGGTTATTTAACGGTTGAATTAATCCATAAAAACACGCGATAGCGAAATTTATCTGGTGttt                                                                                                                                                                                                                                            >  4:113492/1‑275 (MQ=255)
                              tgctgcACAGTTCCTTGCCGTTGGGAAAAACCTGGGCTTTGATTCTGAGAAAGTGAATGTCAACGGCGGGGCCATCGCGCTCGGGCATCCTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTTGGGCTGGCAACACTGTGCATTGGCGGCGGTCCTGGAATTGCGATGGTGATTGAACTGTTGACTTAATCAATAAAAACACCCGATGGTGAAAGTTAACGGGGGTTTTCTTGAACAt                                                                                                                                                                                                                                  >  4:308499/1‑275 (MQ=255)
                                      aggtgcTTGCCGTTGGGGAAACCCCGGGTTTTGATTCTGAGAAAGTGGATGTCAACGGCGGGGCCATCGCCCTCGGGCATCCTATCGTGGCCAGTGTTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGTGGCTGGCAACAGTGGGCATTGAGGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAAACAATAAAAACTCCCGATAGCGAAAGTTATCGGGTATTTGCTAGAACAACGAAGGca                                                                                                                                                                                                                          <  4:347131/270‑2 (MQ=255)
                                           cTTGCCGTTGGGAAAAACCTGGGCTTTGATTCTGAGAAAGTGAATGTCAACGGCGGGGCCATCGCGCTCGGGCATCCTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTGGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGt                                                                                                                                                                                                                     <  2:113493/275‑1 (MQ=255)
                                             tGCCGTTGGGAAAAACCTGGGCTTTGATTCTGAGAAAGTGAATGTCAACGGCGGGGCCATCGCGCTCGGGCATCCTATCGGTGCCAGTGTTGCCTGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGACAAAACGCCGGGGCTGGCAACACTGTGCATTGGCGGCGGTTAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAATACACCCGATAGCGAAAGTTACCGGGTGGTTTCTTGAAAATCCACGACGAAGGTa                                                                                                                                                                                                                    >  2:182220/1‑274 (MQ=255)
                                                                 gCTTTGATTCTGAGAAAGTGAATGTCAACGGCGGGGCCATCGCGCTCGGTCTTCCTATCGGTGCCAGTGGTGCTCTTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCaa                                                                                                                                                                                               <  1:33476/275‑1 (MQ=255)
                                                                                         tCAACGGCGGGGCCATCGCGCTCGGGCATCCTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACCCTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGGAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCGCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGc                                                                                                                                                                       >  2:499438/1‑275 (MQ=255)
                                                                                                      catgcggcTCGGTCATCCTATCGGTGACATTGGTGCTCGTATTATGGTCACACCATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGGGATTGAACGGTTGAATTAATCAATAAAAACACCCGAGAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCAt                                                                                                                                                          <  4:499437/269‑1 (MQ=255)
                                                                                                         cgcgCTCGGGCATCCTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCg                                                                                                                                                        >  2:44965/1‑274 (MQ=255)
                                                                                                                     ccaactgacgctgatcaccgatgaaggatcggtcaatgagaaacaggaaacatttattgtaccgatgcgtaatgctggcgagctgacgctggtgaaaagttttgactggtgattaatggggttaccttcgccgtcgatgttcaagaaa                                                                                                                                                                                                                                                                          >  7:811273‑M1/146‑148 (MQ=255)
                                                                                                                      ccTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATaaaaa                                                                                                                                                                                                                                                                         >  5:478614/1‑148 (MQ=255)
                                                                                                                        actgacgctgatcaccgatgaaggatcggtcaatgagaaacaggaaacatttattgtaccgatgcgtaatgctggcgagctgacgctggtgaaaagttttgactggtgattaatggggttaccttcgccgtcgatgttcaagAAAaca                                                                                                                                                                                                                                                                       <  7:461120‑M1/6‑1 (MQ=255)
                                                                                                                                  aggtgtgCTCGTATTCTGGTCACGCTATTACATGCCATGCAGGCACGCGATAAGACGGTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCa                                                                                                                              <  2:44022/271‑1 (MQ=255)
                                                                                                                                        ccTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGTTACAATAAATGTTTCCTGTTTCTCATTGAcc                                                                                                                        >  4:365516/2‑275 (MQ=255)
                                                                                                                                          tcgaagtCTGGTCAAACTATGACATGCCAAGCAGGCACGAGATAAAACGCTGGGGCGGGCAACACTGTGCAGTGGCGTCGGGCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGa                                                                                                                      <  1:34269/269‑1 (MQ=255)
                                                                                                                                           cGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAacac                                                                                                                                                                                                                                                                      <  5:754146/130‑1 (MQ=255)
                                                                                                                                           cGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAacac                                                                                                                                                                                                                                                                      >  6:754146/1‑130 (MQ=255)
                                                                                                                                               ttCTGGTCCAACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGGGCATTGGAGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCtt                                                                                                                 <  2:192305/275‑1 (MQ=255)
                                                                                                                                                tCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATaaa                                                                                                                                                                                                                                                                           <  8:920972/120‑1 (MQ=255)
                                                                                                                                                    gTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACACGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATAGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTAAAATAAATGTTTCCTGTTTCTCATTGACCGATACttacgcg                                                                                                            >  4:425785/1‑270 (MQ=255)
                                                                                                                                                     tCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATaaaaa                                                                                                                                                                                                                                                                         >  7:1039023/1‑117 (MQ=255)
                                                                                                                                                     tCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATaaaaa                                                                                                                                                                                                                                                                         <  8:1039023/117‑1 (MQ=255)
                                                                                                                                                      cacaCTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAACTTTCGCTATCGGGTGttttta                                                                                                                                                                                                                                         <  7:1131647/148‑3 (MQ=38)
                                                                                                                                                         acTATTACATGCCATGCAGGCACGCGATAAAACGCTTGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCAGTGACCGACCCTTCATCGGTGAt                                                                                                       >  2:438134/1‑275 (MQ=255)
                                                                                                                                                          cTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTGATCAATaaa                                                                                                                                                                                                                                                                           >  7:966269/1‑110 (MQ=255)
                                                                                                                                                            aTTACATGCTATGCAGGCATGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGa                                                                                                                                                                                                                                                            <  8:747407/123‑1 (MQ=255)
                                                                                                                                                            aTTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGa                                                                                                                                                                                                                                                            >  7:747407/1‑123 (MQ=255)
                                                                                                                                                              tACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAac                                                                                                                                                                                                                                                                        <  8:667756/109‑1 (MQ=255)
                                                                                                                                                                   gaaacatttattgtaccgatgcgtaatgctggcgagctgacgctggtgaaaagttttgactggtgattaatggggttaccttcgccgtcgatgttcaagAAAACACCCGATAGCGAAAGTTATCg                                                                                                                                                                                                                                                   <  8:812623‑M1/26‑1 (MQ=255)
                                                                                                                                                                   gaaacatttattgtaccgatgcgtaatgctggcgagctgacgctggtgaaaagttttgactggtgattaatggggttaccttcgccgtcgatgttcaagAAAACACCCGATAGCGAAAGTTATCg                                                                                                                                                                                                                                                   >  7:812623‑M1/100‑125 (MQ=255)
                                                                                                                                                                      atgcAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCg                                                                                                                                                                                                                                                                   >  5:629937/1‑106 (MQ=255)
                                                                                                                                                                      atgcAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCg                                                                                                                                                                                                                                                                   <  6:629937/106‑1 (MQ=255)
                                                                                                                                                                       tgcAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCCCCAGTCAAAACTTTTCACCAGCGTCAGTTCGCCAGCATTACGCATAGGTACCATAAATGTTTCCTGTTTCTCCTTGACCGATCCTTCATCGGTGATCAGCGTCAGTTg                                                                                           >  4:241191/1‑273 (MQ=255)
                                                                                                                                                                       tgcAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAg                                                                                                                                                                                                   >  4:225556/1‑169 (MQ=255)
                                                                                                                                                                       tgcAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAg                                                                                                                                                                                                   >  2:333543/1‑169 (MQ=255)
                                                                                                                                                                       tgcAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCCGCGTCAGTTggg                                                                                         >  2:295770/1‑275 (MQ=255)
                                                                                                                                                                       tgcAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTggg                                                                                         >  2:313230/1‑275 (MQ=255)
                                                                                                                                                                       tgcAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTCTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTggg                                                                                         >  1:86708/1‑275 (MQ=255)
                                                                                                                                                                         tttattgtaccgatgcgtaatgctggcgagctgacgctggtgaaaagttttgactggtgattaatggggttaccttcgccgtcgatgttcaagAAAacac                                                                                                                                                                                                                                                                      <  5:917219‑M1/7‑1 (MQ=255)
                                                                                                                                                                         aaGGCACGCGTAAAAACGCTGGGGCTGGCAAAACGGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAACGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCg                                                                                       <  4:338898/274‑1 (MQ=255)
                                                                                                                                                                           ggCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCaa                                                                                                                                                                                               <  2:225557/169‑1 (MQ=255)
                                                                                                                                                                           ggCACGCGAGAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCaa                                                                                                                                                                                               <  4:333542/169‑1 (MQ=255)
                                                                                                                                                                            gCACGCGATAAAACGCTTGGGCTGGCAACACTGTGCATTGGCGGCGGCCAGGGAATTGCGCTGGTGATTGAACGGTTGAATTAATCCATAACAACACCTGATATCGCAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATCAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCCTTACTCATCTGTACAACAAATGTTTACTGTTTCCCATTCACCGATCCTTCATCGGTGCCCACCGTCAGTTGGGCgg                                                                                      >  4:271203/1‑273 (MQ=255)
                                                                                                                                                                                    tAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTc                                                                                                                                                                                                                                          <  5:1035648/117‑1 (MQ=255)
                                                                                                                                                                                    tAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTc                                                                                                                                                                                                                                          >  6:1035648/1‑117 (MQ=255)
                                                                                                                                                                                     aaaaCGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGa                                                                                                                                                                                                                         >  6:64997/1‑133 (MQ=255)
                                                                                                                                                                                              gggCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTa                                                                                                                                                                                                                                                      >  7:738965/1‑95 (MQ=255)
                                                                                                                                                                                               ggCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATc                                                                                                                                                                                                                                                    >  7:858729/1‑96 (MQ=255)
                                                                                                                                                                                               ggCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATc                                                                                                                                                                                                                                                    <  8:858729/96‑1 (MQ=255)
                                                                                                                                                                                                gctgtaaaCACTTTGCATTGGCGGCGGTANCGTAATTTCGATGGTGATTGAACGTNTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACAGCGACGGCGAAGGTAACCCCATTANTCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTCTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTgcg                                                                <  3:86708/269‑1 (MQ=255)
                                                                                                                                                                                                  tGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGcc                                                              <  2:74798/275‑1 (MQ=255)
                                                                                                                                                                                                  tGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGcc                                                              <  4:104286/275‑1 (MQ=255)
                                                                                                                                                                                                       acacTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCaaaa                                                                                                                                                                                             >  8:163949/1‑143 (MQ=255)
                                                                                                                                                                                                       acacTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCaaaa                                                                                                                                                                                             <  7:163949/143‑1 (MQ=255)
                                                                                                                                                                                                         gacgctggtgaaaagttttgactggtgattaatggggttaccttcgccgtcgatgttcaagAAAaca                                                                                                                                                                                                                                                                       >  5:609759‑M1/62‑67 (MQ=255)
                                                                                                                                                                                                         acTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGaa                                                                                                                                                                                                                                                           <  8:529635/79‑1 (MQ=255)
                                                                                                                                                                                                         acTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGaa                                                                                                                                                                                                                                                           >  7:529635/1‑79 (MQ=255)
                                                                                                                                                                                                          cTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGCCCACCAta                                                       <  2:273176/274‑1 (MQ=255)
                                                                                                                                                                                                             tgCAATGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGAGAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTATCCAGTTGCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGCCCACCAtagtag                                                   <  2:325269/275‑1 (MQ=255)
                                                                                                                                                                                                              tcATTGGCGGCGGTCAGGGAATTGGGATGTGGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTTTCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCCGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGCCCACCAtagtag                                                   <  4:295769/273‑1 (MQ=255)
                                                                                                                                                                                                              gCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTc                                                                                                                                        >  2:301777/1‑189 (MQ=255)
                                                                                                                                                                                                               cATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGCCCACCATagtagt                                                  <  2:308500/274‑1 (MQ=255)
                                                                                                                                                                                                               cATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGCCCACCATagtagt                                                  <  4:44964/274‑1 (MQ=255)
                                                                                                                                                                                                                   ggcggcGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGCCCACCATAGTAGTTGat                                              <  2:365517/274‑1 (MQ=255)
                                                                                                                                                                                                                    ggggcggTAAGGGAAATGTGGTGGTGATTGAAAGGGTGAATTAATCAATAAAAACACCCGGAAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGCCCACCATAGTAGTTGatat                                            <  4:438518/273‑1 (MQ=255)
                                                                                                                                                                                                                     cggcggTCAGGGAATTGCGATGGTTATTGAACGGTTGAAGTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCATCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGCCCACCATAGTAGTTGAtata                                           <  4:452910/275‑1 (MQ=255)
                                                                                                                                                                                                                         tttgactggtgattaatggggttaccttcgccgtcgatgttcaagAAAACACCCGATAGCGAAAGTTATCggg                                                                                                                                                                                                                                                 >  5:347618‑M1/46‑73 (MQ=255)
                                                                                                                                                                                                                         tttgactggtgattaatggggttaccttcgccgtcgatgttcaagAAAACACCCGATAGCGAAAGTTATCggg                                                                                                                                                                                                                                                 <  6:347618‑M1/28‑1 (MQ=255)
                                                                                                                                                                                                                          gTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTa                                                                                                                                                                                                                                                      >  7:114988/1‑67 (MQ=255)
                                                                                                                                                                                                                          gTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTa                                                                                                                                                                                                                                                      <  8:114988/67‑1 (MQ=255)
                                                                                                                                                                                                                          gTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAAc                                                                                                                                                                                                                  <  5:181034/103‑1 (MQ=255)
                                                                                                                                                                                                                          gTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAAc                                                                                                                                                                                                                  >  6:181034/1‑103 (MQ=255)
                                                                                                                                                                                                                               ggAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGCCCACCATAGTAGTTGATATACACCTGATa                                  >  2:29631/1‑274 (MQ=255)
                                                                                                                                                                                                                                gAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCggg                                                                                                                                                                                                                                                 <  6:317161/66‑1 (MQ=255)
                                                                                                                                                                                                                                  aTTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACttt                                                                                                                                                                                         <  5:54876/120‑1 (MQ=255)
                                                                                                                                                                                                                                  aTTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACttt                                                                                                                                                                                         >  6:54876/1‑120 (MQ=255)
                                                                                                                                                                                                                                        atggggttaccttcgccgtcgatgttcaagAAAACACCCGATAGCGaaa                                                                                                                                                                                                                                                          >  8:1071677‑M1/31‑49 (MQ=255)
                                                                                                                                                                                                                                        atggggttaccttcgccgtcgatgttcaagAAAACACCCGATAGCGaaa                                                                                                                                                                                                                                                          <  5:151842‑M1/19‑1 (MQ=255)
                                                                                                                                                                                                                                        atggggttaccttcgccgtcgatgttcaagAAAACACCCGATAGCGaaa                                                                                                                                                                                                                                                          >  6:151842‑M1/31‑49 (MQ=255)
                                                                                                                                                                                                                                        atggggttaccttcgccgtcgatgttcaagAAAACACCCGATAGCGaaa                                                                                                                                                                                                                                                          <  7:1071677‑M1/19‑1 (MQ=255)
                                                                                                                                                                                                                                             gATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACtt                                                                                                                                                                                          <  8:796832/108‑1 (MQ=255)
                                                                                                                                                                                                                                             gATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACtt                                                                                                                                                                                          >  7:796832/1‑108 (MQ=255)
                                                                                                                                                                                                                                               ttGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACt                                                                                                                                                                                           <  7:460546/105‑1 (MQ=255)
                                                                                                                                                                                                                                               ttGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACt                                                                                                                                                                                           >  8:460546/1‑105 (MQ=255)
                                                                                                                                                                                                                                               taccttcgccgtcgatgttcaagAAAACACCCGATAGCGAAAGTTATCggg                                                                                                                                                                                                                                                 >  8:426238‑M1/24‑51 (MQ=255)
                                                                                                                                                                                                                                               taccttcgccgtcgatgttcaagAAAACACCCGATAGCGAAAGTTATCggg                                                                                                                                                                                                                                                 <  7:426238‑M1/28‑1 (MQ=255)
                                                                                                                                                                                                                                                      gTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGc                                                                                                                                                            >  5:708946/1‑129 (MQ=255)
                                                                                                                                                                                                                                                      gTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGc                                                                                                                                                            <  6:708946/129‑1 (MQ=255)
                                                                                                                                                                                                                                                       ttGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGa                                                                                                                                                                                                                         >  6:156266/1‑67 (MQ=255)
                                                                                                                                                                                                                                                       ttGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGa                                                                                                                                                                                                                         <  5:156266/67‑1 (MQ=255)
                                                                                                                                                                                                                                                             tgaTCAATAAAAACACCCGATAGCGAAAGTTATCGTGTGGTTTCTTGAACATCGAGGGCGAAGGTAACCCTATTAATCACCAGAAAAAACGTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGTTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGCCCACCATAGTAGTTGATATACACCTGATAGCGCCCGTGAATTGGCGCGGGCATGGCGaa    <  4:280288/272‑1 (MQ=255)
                                                                                                                                                                                                                                                               aTCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGCCCACCATAGTAGTTGATATACACCTGATAGCGCCCGTGAATTGGCGCGGGCATGGCGaaaa  >  2:259956/1‑274 (MQ=255)
                                                                                                                                                                                                                                                                 cAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAg                                                                                                                                                                                                                       >  8:360827/1‑59 (MQ=255)
                                                                                                                                                                                                                                                                 cAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAg                                                                                                                                                                                                                       <  7:360827/59‑1 (MQ=255)
                                                                                                                                                                                                                                                                      AAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAg                                                                                                                                                                                  >  5:1118948‑M1/1‑91 (MQ=255)
                                                                                                                                                                                                                                                                      AAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAg                                                                                                                                                                                  <  6:777834‑M1/91‑1 (MQ=255)
                                                                                                                                                                                                                                                                      AAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAg                                                                                                                                                                                  >  5:777834‑M1/1‑91 (MQ=255)
                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                          
TATTGATCTCATTGAGGCTAATGAAGCATTTGCTGCACAGTTCCTTGCCGTTGGGAAAAACCTGGGCTTTGATTCTGAGAAAGTGAATGTCAACGGCGGGGCCATCGCGCTCGGGCATCCTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAATCAATAAAAACACCCGATAGCGAAAGTTATCGGGTGTTTTCTTGAACATCGACGGCGAAGGTAACCCCATTAATCACCAGTCAAAACTTTTCACCAGCGTCAGCTCGCCAGCATTACGCATCGGTACAATAAATGTTTCCTGTTTCTCATTGACCGATCCTTCATCGGTGATCAGCGTCAGTTGGGCGGTGGTTAATTCCGTTTCGCTGCGCCCACCATAGTAGTTGATATACACCTGATAGCGCCCGTGAATTGGCGCGGGCATGGCGAAAA  >  NC_000913/2327038‑2327566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.