New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3327316 =193 (1.220)10 (0.070) 8/256 NT 5.5% coding (349/630 nt) rlmE 23S rRNA U2552 2'‑O‑ribose methyltransferase, SAM‑dependent
?NC_000913 3327340 = 156 (1.030)coding (325/630 nt) rlmE 23S rRNA U2552 2'‑O‑ribose methyltransferase, SAM‑dependent

Only 100 of 220 total aligned reads displayed.

TACGCCCGGTCGCTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGACCAACCACCCGGAGCAGCACCAAGGTCGACAACCGTCATTCCCGGTTTAAAGAGTTTGTCACTTTGCTGTATTTCATCAAGTTTAAACCAGGCACGGGAACGTAACCCCTTTTTCTGT  >  NC_000913/3327043‑3327587
                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                               
tACGCCCGGTCGCTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACttt                                                                                                                                                                                                                                                                                 >  2:305798/1‑274 (MQ=255)
                       acTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCCCATGTTTGGTGCCATATCGGACATGAACACCTGGACTTTGCTGTCGCCAACGCGCTCcagcag                                                                                                                                                                                                                                                         >  2:435056/1‑275 (MQ=255)
                         ttCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGAAGTg                                                                                                                                                                                                                                                       >  2:321415/1‑275 (MQ=255)
                         ttCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACCCGCTCCAGCCGTg                                                                                                                                                                                                                                                       >  2:82864/1‑275 (MQ=255)
                          tCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCcag                                                                                                                                                                                                                                                            >  2:447413/1‑269 (MQ=255)
                                   cGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCAc                                                                                                                                                                                                                                             <  4:305797/275‑1 (MQ=255)
                                                                   gACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGt                                                                                                                                                                                                             <  2:56227/275‑1 (MQ=255)
                                                                                 gggAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATa                                                                                                                                                                                               <  2:228368/275‑1 (MQ=255)
                                                                                 gggAGCGAATTTCCACTAGATACCCCACGAAACCTTCGCCCTGGAACACCTTCACTAACAAACTGCCACCTGGCGCTAAGCAATCCCGACACATTTCTAGCGCCAGTTCCACCAGATCCAGGGCACGGGGGATATCCACCGCCGGGGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATa                                                                                                                                                                                               <  4:341520/275‑1 (MQ=255)
                                                                                  ggAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCCCGAGTTCAACACGAAAATCGCCATGACGAAAGTCCACACCAACGAAAg                                                                                                                                                                                              >  4:105486/1‑275 (MQ=255)
                                                                                   gAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCCNATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCANnccg                                                                                                                                                                                                                                                                  >  4:544514/1‑206 (MQ=255)
                                                                                       gAAGTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGACACCTGGCGCGAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTcc                                                                                                                                                                                                           <  2:544515/257‑1 (MQ=255)
                                                                                                             gAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACg                                                                                                                                                                                                                                 >  2:375320/1‑213 (MQ=255)
                                                                                                                                     cACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCg                                                                                                                                                                                                                                                                          <  7:1110186/148‑1 (MQ=255)
                                                                                                                                          cAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAAc                                                                                                                                                                                                                                                                     <  6:599004/148‑1 (MQ=255)
                                                                                                                                           aaaaCTGCCGCCTGGCTCGAATACATAACGACACCATTCTAGCGCCAGTTCCACAAGAGACAGGGCACGGGTGTTTTCCCCCGCAGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTg                                                                                                                                      <  4:96028/274‑1 (MQ=255)
                                                                                                                                            aaaCTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCCACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGAc                                                                                                                                    >  4:319578/1‑275 (MQ=255)
                                                                                                                                                cacaatatgtggtcacccaaattggcggcaaaggccgcatcatcgcttgcgatcttttacctatggatcctatcgttggtgtggactttcttcagggcgattttcgtgatgaactggtgatgaaagcactgct                                                                                                                                                                                                                                                                              >  6:855969‑M1/130‑133 (MQ=255)
                                                                                                                                                  ccACCTGGCGCTCATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCCCCAGTTCATCACGAACATCCCCCTGAATAAAGTCCCCACCAACGATAGGAACCATAGGTAAACGATCGCAAGCAATGATGCGGCCTTTGCCGCCAATTTGGGTAACCACat                                                                                                                               >  4:464575/1‑274 (MQ=255)
                                                                                                                                                  ccACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAACAAAGTCCACACCAACGATAGGATCCCTAGGTAAAAGATCGCAAGCATTGATGCGGCCTTTGCCGCCCATTTTGTTGACCACat                                                                                                                               >  2:505525/1‑274 (MQ=255)
                                                                                                                                                  ccACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTAATCACCAGTTCATCACGAAAATCGCCCTGCAGAAAACCNCAACCAACGATAGGATCCCAAGGTAAAAGACCGCAAACTATGAAGGCTCCTTATCCGCCAATTTggcttgcaaata                                                                                                                               >  3:129692/1‑264 (MQ=255)
                                                                                                                                                         gcgcTAATACATCACTGCACATTTCTGGCGCCAGTTCCACCAGTTACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGac                                                                                                                       <  4:321414/275‑1 (MQ=255)
                                                                                                                                                          cgcTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCt                                                                                                                                                                                                                                                     >  7:1104292/1‑148 (MQ=255)
                                                                                                                                                           gcTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCtt                                                                                                                                                                                                                                                    <  7:929709/148‑1 (MQ=255)
                                                                                                                                                            cTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCttt                                                                                                                                                                                                                                                   <  6:252207/148‑1 (MQ=255)
                                                                                                                                                               aTACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTtcat                                                                                                                                                                                                                                                <  8:540788/148‑1 (MQ=255)
                                                                                                                                                                 acaacacagaacaTTTCAAGGGCCAGTTCCACCGGCTCAATGGAACAGCGGTTATCAACCTCCGGGGTTCCGCTCATGTTTGGTGGCAGTGTGGACAGGCAAAACTGGATTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCGCAAGTTCAGAACGAAAATCGCCCTGAACAAAGTCCACACAAACGATAGGAGCCATAGGGAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGACCAaccacc                                                                                                               <  4:505524/265‑1 (MQ=255)
                                                                                                                                                                 aCATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTtcatca                                                                                                                                                                                                                                              >  6:74372/1‑148 (MQ=255)
                                                                                                                                                                   aTCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCAcc                                                                                                                                                                                                                                            <  8:260237/148‑1 (MQ=255)
                                                                                                                                                                    tCACGACACATTTCTAGCGCCAGCTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCtt                                                                                                                                                                                                                                                    >  7:284340/1‑139 (MQ=255)
                                                                                                                                                                         acacATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGtt                                                                                                                                                                                                                                        >  8:882905/1‑146 (MQ=255)
                                                                                                                                                                          cacaTTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCCACGCGCTCCAGCAGTGc                                                                                                                                                                                                                                                      >  7:247053/1‑131 (MQ=255)
                                                                                                                                                                          cacaTTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGc                                                                                                                                                                                                                                                      <  8:247053/131‑1 (MQ=255)
                                                                                                                                                                           gcaaaggccgcatcatcgcttgcgatcttttacctatggatcctatcgttggtgtggactttcttcagggcgattttcgtgatgaactggtgatgaaagcacTGCTGTCGCCAACGCGCTCcagcag                                                                                                                                                                                                                                                         <  7:199304‑M1/25‑1 (MQ=255)
                                                                                                                                                                            caaaggccgcatcatcgcttgcgatcttttacctatggatcctatcgttggtgtggactttcttcagggcgattttcgtgatgaactggtgatgaaagcacTGCTGTCGCCAACGCGCTCcagca                                                                                                                                                                                                                                                          <  8:188466‑M1/24‑1 (MQ=255)
                                                                                                                                                                            caTTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGc                                                                                                                                                                                                                                                      >  8:350838/1‑129 (MQ=255)
                                                                                                                                                                              tttCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCt                                                                                                                                                                                                                                                                >  6:324838/1‑117 (MQ=255)
                                                                                                                                                                              tttCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCAc                                                                                                                                                                                                                                             >  8:526389/1‑136 (MQ=255)
                                                                                                                                                                              tttCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACg                                                                                                                                                                                                                                 >  7:54677/1‑148 (MQ=255)
                                                                                                                                                                               ttCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTcc                                                                                                                                                                                                                                                              <  5:573842/118‑1 (MQ=255)
                                                                                                                                                                                  tAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACgttcg                                                                                                                                                                                                                             <  5:833867/148‑5 (MQ=255)
                                                                                                                                                                                    gcgcCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGACCAACCACCCGGAGCAGCACCAAGGTc                                                                                             >  2:13743/1‑274 (MQ=255)
                                                                                                                                                                                     cgcCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACttt                                                                                                                                                                                                                                                                                 >  8:913356/1‑93 (MQ=255)
                                                                                                                                                                                       ccaatgccaccaGATACATGGCACGGGGGAGATCCACCGCCGGTGTTCCGCGCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGACAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGACCAACCACCCGGAGCAGCACCAAGGTCGACa                                                                                         <  1:36117/269‑1 (MQ=255)
                                                                                                                                                                                        cAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGc                                                                                                                                                                                                                                                                               <  7:875213/92‑1 (MQ=255)
                                                                                                                                                                                         aGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACCTGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTAATCACGACAATCGCCATGAAGAAAATCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGTGGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGAACAACCACACGGAGCAGAAACAAGGGCGACaaa                                                                                       >  1:85023/1‑274 (MQ=255)
                                                                                                                                                                                           gtCCACCAGTTACATGGCACGGGGGAGATCCACCGCCGGTTTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGACCAACCACCCGGAGCAGCACCAAGGTCGACAACCg                                                                                     <  4:181303/274‑1 (MQ=255)
                                                                                                                                                                                            tCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCAcc                                                                                                                                                                                                                                            <  8:38493/123‑1 (MQ=255)
                                                                                                                                                                                            tCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTgaa                                                                                                                                                                                                                   <  6:656804/148‑1 (MQ=255)
                                                                                                                                                                                               accaGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGt                                                                                                                                                                                                                                                        <  8:632109/108‑1 (MQ=255)
                                                                                                                                                                                               accaGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCAcc                                                                                                                                                                                                                                            <  5:644442/120‑1 (MQ=255)
                                                                                                                                                                                               accaGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTgaagaa                                                                                                                                                                                                                >  6:567403/1‑148 (MQ=255)
                                                                                                                                                                                                  aGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTga                                                                                                                                                                                                                    <  7:380499/141‑1 (MQ=255)
                                                                                                                                                                                                  aGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGt                                                                                                                                                                                                             <  8:453175/148‑1 (MQ=255)
                                                                                                                                                                                                  aGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGt                                                                                                                                                                                                             <  8:653443/148‑1 (MQ=255)
                                                                                                                                                                                                    aTACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTcc                                                                                                                                                                                                           <  8:336769/148‑1 (MQ=255)
                                                                                                                                                                                                     tACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCCGTGATCCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGACCAACCCCCCGGCGCAGCACCAAGGTCAACAACCGTCATTCCCgg                                                                           >  4:20482/1‑275 (MQ=255)
                                                                                                                                                                                                       cATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCcagc                                                                                                                                                                                                                                                           <  8:56085/97‑1 (MQ=255)
                                                                                                                                                                                                         tGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCg                                                                                                                                                                                                                                                                          >  5:190983/1‑80 (MQ=255)
                                                                                                                                                                                                         tGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAAc                                                                                                                                                                                                                                                                     >  7:651834/1‑85 (MQ=255)
                                                                                                                                                                                                         tGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTtca                                                                                                                                                                                                                                      <  7:616588/116‑1 (MQ=255)
                                                                                                                                                                                                           gCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCaa                                                                                                                                                                                                    <  8:1104292/148‑1 (MQ=255)
                                                                                                                                                                                                           gCACGGGGGATATCATCCGCCGGTGTTCCGGTCATGTTTGGTGCCAGATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCGTTGCCGCCAATTTGGGTGACCACATATTGTGACCAACCACCCGGAGCAGCACCAAGGTCGACAACCGTCATTCCCGGTTTaaa                                                                     <  4:443232/275‑1 (MQ=255)
                                                                                                                                                                                                             aCGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACg                                                                                                                                                                                                  <  5:866445/148‑1 (MQ=255)
                                                                                                                                                                                                               tggatcctatcgttggtgtggactttcttcagggcgattttcgtgatgaactggtgatgaaagcacTGCTGTCGCCAACGCGCTCCAGCAGTGc                                                                                                                                                                                                                                                      >  7:349547‑M1/67‑94 (MQ=255)
                                                                                                                                                                                                               gggggATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGAt                                                                                                                                                                                                <  7:522675/148‑1 (MQ=255)
                                                                                                                                                                                                                ggggATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGc                                                                                                                                                                                                                                                                               <  5:664225/68‑1 (MQ=255)
                                                                                                                                                                                                                ggatcctatcgttggtgtggactttcttcagggcgattttcgtgatgaactggtgatgaaagcacTGCTGTCGCCAACGCGCTCCAGCAGTGc                                                                                                                                                                                                                                                      >  8:1017616‑M1/66‑93 (MQ=255)
                                                                                                                                                                                                                ggatcctatcgttggtgtggactttcttcagggcgattttcgtgatgaactggtgatgaaagcacTGCTGTCGCCAACGCGCTCCAGCAGTGc                                                                                                                                                                                                                                                      <  7:1017616‑M1/28‑1 (MQ=255)
                                                                                                                                                                                                                    cctatcgttggtgtggactttcttcagggcgattttcgtgatgaactggtgatgaaagcactgct                                                                                                                                                                                                                                                                              >  7:900973‑M1/62‑65 (MQ=255)
                                                                                                                                                                                                                       tCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCaa                                                                                                                                                                                                                                                                      <  8:1116133/70‑1 (MQ=255)
                                                                                                                                                                                                                          aCCTCCGGTGTTCCGCTCATGTTGGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCGCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGACCAACCACCCGGAGCAGCACCAAGGTCGACAACCGTCATTCCCGGTTTAAAGAGTTTGTCACttt                                                       <  1:104495/274‑1 (MQ=255)
                                                                                                                                                                                                                           ccgccgGTGTTCCGCTCATGTTTGGTGCTATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCACTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACTAAAGATAGGATCCATAGGTAAAAGATCGCACGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACCTATTGTGACCAACCACCCGGAGCAGCACCAAGGTCGACAACCGCCATTCCCGGCTTAAACAGTTTGCCACTTTg                                                      >  2:101339/1‑274 (MQ=255)
                                                                                                                                                                                                                           ccgccgGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGAt                                                                                                                                                                                                >  7:527768/1‑136 (MQ=255)
                                                                                                                                                                                                                           ccgccgGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGACCAACCACCCGGAGCAGCACCAAGGTCGACAACCGTCATTCCCGGTTTAAAGAGTTTGTCACTTTGc                                                     >  2:169249/1‑275 (MQ=255)
                                                                                                                                                                                                                            cgccgGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGACCAACCACCCGGAGCAGCACCAAGGTCGACAACCGTCATTCCCGGTTTAAAGAGTTTGTCACTTTGCt                                                    <  2:20482/275‑1 (MQ=255)
                                                                                                                                                                                                                                 gtgtTCCGTTCATGTTTGGTGCCATTTCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCTAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACTAACGATAGGAACCATAGGTAAAAGATCGCAAGCGATGATGCGCCCTTTGCCTCCAATTTGGGTAACCACATTTTGTAATCAACCACCCGGAGCAGCCACAAGGTCGAAAACCGTCATTGCCGGTTTAAAGAGTTGGTAACTGTGCAGTag                                                >  4:58162/1‑273 (MQ=255)
                                                                                                                                                                                                                                 gtgtTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATAACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATCTTGTGACCAACCACCCGGAGCAGCACCAAGGGCAACAACCGTCAATCCCGGTTTAAAGAGTTTGGCACTTTGcgttctt                                               >  4:353402/1‑269 (MQ=255)
                                                                                                                                                                                                                                    ttCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGt                                                                                                                                                                                                                                                                            <  5:413580/51‑1 (MQ=255)
                                                                                                                                                                                                                                    ttCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGt                                                                                                                                                                                                                                                                            >  6:413580/1‑51 (MQ=255)
                                                                                                                                                                                                                                    ttCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCAcc                                                                                                                                                                                                                                            >  5:197273/1‑83 (MQ=255)
                                                                                                                                                                                                                                       cGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTg                                                                                                                                                                                                                     <  8:871836/103‑1 (MQ=255)
                                                                                                                                                                                                                                         cTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCcagc                                                                                                                                                                                                                                                           <  5:301004/63‑1 (MQ=255)
                                                                                                                                                                                                                                         cTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTga                                                                                                                                                                                                                    >  7:147292/1‑102 (MQ=255)
                                                                                                                                                                                                                                           cATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGAt                                                                                                                                                                            <  5:806077/140‑1 (MQ=255)
                                                                                                                                                                                                                                                 tGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGACCAACCACCCGGAGCAGCACCAAGGTCGACAACCGTCATTCCCGGTTTAAAGAGTTTGTCACTTTGCTGTATTTCATCAAGTTTAAAcc                               <  1:129692/275‑1 (MQ=255)
                                                                                                                                                                                                                                                  ggTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGc                                                                                                                                                             <  8:474118/148‑1 (MQ=255)
                                                                                                                                                                                                                                                    tGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCgat                                                                                                                                                                  >  6:829800/1‑141 (MQ=255)
                                                                                                                                                                                                                                                        atatCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGAt                                                                                                                                                                            <  6:1109277/127‑1 (MQ=255)
                                                                                                                                                                                                                                                        atatCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGAt                                                                                                                                                                            >  5:1109277/1‑127 (MQ=255)
                                                                                                                                                                                                                                                              gACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGACCAACCACCCGGAGCAGCACCAAGGTCGACAACCGTCATTCCCGGTTTAAAGAGTTTGTCACTTTGCTGTATTTCATCAAGTTTAAACCAGGCACGGGAACg                  >  2:64603/1‑275 (MQ=255)
                                                                                                                                                                                                                                                               aCATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAgg                                                                                                                                                                                             <  7:74076/103‑1 (MQ=255)
                                                                                                                                                                                                                                                               aCATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAgg                                                                                                                                                                                             <  7:443710/103‑1 (MQ=255)
                                                                                                                                                                                                                                                                   taCAACCTGGACTTTGCGGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGACCAACCACCCGGAGCAGCACCAAGGTCGACAACCGTCATTCCCGGTTTAAAGAGTTTGTCACTTTGCTGTATTTCATCAAGTTTAAACCAGGCACGGGAACGTAAc              <  4:190835/273‑1 (MQ=255)
                                                                                                                                                                                                                                                                   gACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGACCAACCACCCGGAGCAGCACCAAGGTCGACAACCGTCATTCCCGGTTTAAAGAGTTTGTCACTTTGCTGTATTTCATCAAGTTTAAACCAGGCACGGGAACGTaa               >  2:351590/1‑273 (MQ=255)
                                                                                                                                                                                                                                                                    aCAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGt                                                                                                                                                                                                                                         >  5:489361/1‑54 (MQ=255)
                                                                                                                                                                                                                                                                         cTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGc                                                                                                                                                                                                                         >  7:469285/1‑65 (MQ=255)
                                                                                                                                                                                                                                                                          tGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGc                                                                                                                                                                                                                         <  6:912295/64‑1 (MQ=255)
                                                                                                                                                                                                                                                                          tGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGc                                                                                                                                                                                                                         >  5:912295/1‑64 (MQ=255)
                                                                                                                                                                                                                                                                          tGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTgaagaa                                                                                                                                                                                                                >  6:191366/1‑73 (MQ=255)
                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                               
TACGCCCGGTCGCTACAATATACACTTCCCGCGAACGTGCACGAGAAGAGTCCGGCTTACGAACTTTGACCTTCGTAAACAGGGAGCGAATTTCCCTTAGATACTCATCGAAACCTTCGCCCTGGAACACCTTCACTACAAAACTGCCACCTGGCGCTAATACATCACGACACATTTCTAGCGCCAGTTCCACCAGATACATGGCACGGGGGATATCCACCGCCGGTGTTCCGCTCATGTTTGGTGCCATATCGGACATGACAACCTGGACTTTGCTGTCGCCAACGCGCTCCAGCAGTGCTTTCATCACCAGTTCATCACGAAAATCGCCCTGAAGAAAGTCCACACCAACGATAGGATCCATAGGTAAAAGATCGCAAGCGATGATGCGGCCTTTGCCGCCAATTTGGGTGACCACATATTGTGACCAACCACCCGGAGCAGCACCAAGGTCGACAACCGTCATTCCCGGTTTAAAGAGTTTGTCACTTTGCTGTATTTCATCAAGTTTAAACCAGGCACGGGAACGTAACCCCTTTTTCTGT  >  NC_000913/3327043‑3327587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.