New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3721045 =189 (1.200)471 (3.000) 206/264 NT 71.7% noncoding (413/1443 nt) IS150 repeat region
?NC_000913 = 3839774 185 (1.180)coding (220/819 nt) nlpA cytoplasmic membrane lipoprotein‑28

Only 100 of 724 total aligned reads displayed.

TGGTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTATGAAAAACATGGAGAAAAAGGTTTAATTCCCAAACCTAAAGGCGTTAGTGCTGATCCAGAGTTGCGTATTAAGGTCGTGAAAGCTGTGATCGAGCAGCACATGTCCCTTAATCAGGCTGCTGCTCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTTTTATTATCATCTAAAGGCTCTCAGCAAGCCTGAC  >  NC_000913/3720775‑3721311
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                          
                              ctctttttgcaacagtaaaagtgcgcgaccaaggttggtcgggtcgttggggatcgccactgtcgcgccttcttttatttgcgccacggttttgatttttttggaataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCg                                                                                                                                                                                                                                              <  2:404316‑M1/31‑1 (MQ=255)
                                 tttttgcaacagtaaaagtgcgcgaccaaggttggtcgggtcgttggggatcgccactgtcgcgccttcttttatttgcgccacggttttgatttttttggaataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCAt                                                                                                                                                                                                                                          >  2:277981‑M1/238‑272 (MQ=255)
                                   tttgcaacagtaaaagtgcgcgaccaaggttggtcgggtcgttggggatcgccactgtcgcgccttcttttatttgcgccacggttttgatttttttggaataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCa                                                                                                                                                                                                                                     <  4:238866‑M1/40‑1 (MQ=255)
                                                     cgcgaccaaggttggtcgggtcgttggggatcgccactgtcgcgccttcttttatttgcgccacggttttgatttttttggaataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGAc                                                                                                                                                                                                                   <  2:375312‑M1/58‑1 (MQ=255)
                                                                  ggtcgggtcgttggggatcgccactgtcgcgccttcttttatttgcgccacggttttgatttttttggaataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTTTCAAAAGACCGACGCATTGAgg                                                                                                                                                                                                      <  2:436699‑M1/71‑1 (MQ=255)
                                                                                                 ccttcttttatttgcgccacggttttgatttttttggaataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGaaa                                                                                                                                                                        >  2:514367‑M1/174‑274 (MQ=255)
                                                                                                     cttttatttgcgccacggttttgatttttttggaataacccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTg                                                                                                                                                                                                                                                                        >  4:70022‑M1/170‑174 (MQ=255)
                                                                                                                          tgattgttttggaataaccggccatagggaagacaaacgtatttcccaccgctaccagtttataaccattcgcctgatttttttgtttaagaaagggtcgatgcttgaagacattcgcatcaagttagccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTg                                                                                                                                              >  4:515651‑M1/149‑275 (MQ=255)
                                                                                                                                        cagcaAATGTTCCTTAATCAGGCTGCTGCTAACTTTATGCTTGCTGGTAGGGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCa                                                                                                                                <  1:17686/275‑1 (MQ=255)
                                                                                                                                            ccgccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCa                                                                                                                                                                                                                                                                      >  7:481865‑M1/131‑137 (MQ=255)
                                                                                                                                            acaTGTCCCTTAATCAGGCTGCTGCTCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGa                                                                                                                                                                                                                                                           >  8:126430/1‑148 (MQ=255)
                                                                                                                                               ccatagggaagacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATc                                                                                                                                                                                                                                                         >  7:209432‑M1/128‑147 (MQ=255)
                                                                                                                                                     ttAATCAGGCTGCTGCTCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGa                                                                                                                                             >  2:389876/1‑249 (MQ=255)
                                                                                                                                                        agacaaacgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGc                                                                                                                                                                                                                                               >  8:1107982‑M1/119‑148 (MQ=255)
                                                                                                                                                           aGGCTGCTGCTCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCAATGAAAAGCGGGAAGAAGCTGTTTTACGCGCGCCCAAGTTTGGCACAAAAAGAAACATTGCAATATAAGTTGATCCAGAAAAAGCgca                                                                                                                                                                                                                                            >  7:36968/1‑146 (MQ=255)
                                                                                                                                                             gctgctgctCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTa                                                                                                           <  2:166912/275‑1 (MQ=255)
                                                                                                                                                              acgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCa                                                                                                                                                                                                                                                                      <  5:498253‑M1/7‑1 (MQ=255)
                                                                                                                                                               tgctgctCACTTTATGCTTGCTGGAAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGAATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGaa                                                                                                                                            <  2:354645/240‑1 (MQ=255)
                                                                                                                                                               cgtatttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCCCATCCCACGAAAAAGTAAAAGTaca                                                                                                         <  4:127061‑M1/164‑2 (MQ=255)
                                                                                                                                                                   gctCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCAt                                                                                                                                                                                                                                    >  7:926144/1‑148 (MQ=255)
                                                                                                                                                                    ttcccaccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCAtt                                                                                                                                                                                                                                   <  6:472460‑M1/42‑1 (MQ=255)
                                                                                                                                                                        caccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAg                                                                                                                                                                                                                               <  5:1016814‑M1/46‑1 (MQ=255)
                                                                                                                                                                         accgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCg                                                                                                                                                                                                                                              <  3:97054‑M1/31‑1 (MQ=255)
                                                                                                                                                                          ccgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTa                                                                                               <  2:104660‑M1/174‑1 (MQ=255)
                                                                                                                                                                           cgctaccagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCCTTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTa                                                                                               <  4:186063‑M1/174‑1 (MQ=255)
                                                                                                                                                                            ggtacccggttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAgg                                                                                            >  4:375311‑M1/99‑275 (MQ=255)
                                                                                                                                                                               accagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCAtt                                                                                                                                                                                                                                   <  8:1023125‑M1/42‑1 (MQ=255)
                                                                                                                                                                                 tgctGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGAt                                                                                                                                                                                                                                                          >  5:26830/1‑112 (MQ=255)
                                                                                                                                                                                 tgctGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGAt                                                                                                                                                                                                                                                          >  7:729238/1‑112 (MQ=255)
                                                                                                                                                                                 cagtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATc                                                                                                                                                                                                                                                                 <  5:1065826‑M1/12‑1 (MQ=255)
                                                                                                                                                                                  gctGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGttt                                                                                      >  2:454731/1‑275 (MQ=255)
                                                                                                                                                                                  agtttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCa                                                                                                                                                                                                                                                                      >  8:17475‑M1/93‑99 (MQ=255)
                                                                                                                                                                                    tttataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAACAGCTGAAAGCCTTAGCTCATCACACGAAAAAGGCAAAGTACTAAACGAGCTAAGGCAGTTTTa                                                                                    <  4:158191‑M1/185‑1 (MQ=255)
                                                                                                                                                                                      tataaccatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTAt                                                                                   <  1:101174‑M1/186‑1 (MQ=255)
                                                                                                                                                                                          accatgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGa                                                                                                                                                                                                                                                           >  7:991998‑M1/85‑102 (MQ=255)
                                                                                                                                                                                             atgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCa                                                                                                                                                                                                                                                                      <  7:860288‑M1/7‑1 (MQ=255)
                                                                                                                                                                                              tgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTg                                                                                                                                                                                                         >  5:978952‑M1/81‑148 (MQ=255)
                                                                                                                                                                                              tgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATTTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTAAACGAGCGAAGGCAGTTTTAACCTCTtgat                                                                          <  4:346285‑M1/195‑1 (MQ=255)
                                                                                                                                                                                              tgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTtg                                                                            <  1:44956‑M1/193‑1 (MQ=255)
                                                                                                                                                                                              tgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAACCCTTAGCTCATCCCCCGAAAAAGTGAAAGTACTAAACGAGCTAAGGc                                                                                           <  4:271431‑M1/178‑1 (MQ=255)
                                                                                                                                                                                              tgcgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgacttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGAGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCCTAACCCACGAAAAAGTGAAAGTACTCAACGAGCAAaggcagttttacccctttgta                                                                          <  4:319433‑M1/195‑11 (MQ=255)
                                                                                                                                                                                                cgcctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGa                                                                                                                                                                                                                >  8:829049‑M1/79‑139 (MQ=255)
                                                                                                                                                                                                  tAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAg                                                                       <  2:193023/274‑1 (MQ=255)
                                                                                                                                                                                                  cctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCtt                                                                                                                                                                >  2:547757‑M1/77‑185 (MQ=255)
                                                                                                                                                                                                   ctgattatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCAt                                                                                                                                                                                                                                                                          >  5:786717‑M1/76‑78 (MQ=255)
                                                                                                                                                                                                       aGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGTTCATCCCACGAAAAAGTAAAAGTACTCAACGAGCTAAGGCAGTTTTACCCCTTTGATTAGCTtccc                                                                 >  4:477593/1‑273 (MQ=255)
                                                                                                                                                                                                        tatcttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGa                                                                                                                                                                                               <  6:185543‑M1/78‑1 (MQ=255)
                                                                                                                                                                                                            ttgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGc                                                            >  2:238867‑M1/67‑275 (MQ=255)
                                                                                                                                                                                                             tgttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGACAAAGCGGCATCAGCATTGGTGCTg                                                                                                                                                                                                                            >  8:572995‑M1/66‑114 (MQ=255)
                                                                                                                                                                                                               ttcaagaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTg                                                                                                                                                                                                                                  <  4:397063‑M1/43‑1 (MQ=255)
                                                                                                                                                                                                               cagggTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTg                                                          <  2:148783/271‑1 (MQ=255)
                                                                                                                                                                                                                  ggTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCgg                                                       <  4:433433/274‑1 (MQ=255)
                                                                                                                                                                                                                   agaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTc                                                                                                                                                                                    <  5:664437‑M1/89‑1 (MQ=255)
                                                                                                                                                                                                                   agaaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCt                                                                                                                                       >  2:310285‑M1/60‑193 (MQ=255)
                                                                                                                                                                                                                    tCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCg                                                                                                                                                                                   >  6:87600/1‑148 (MQ=255)
                                                                                                                                                                                                                     aaagggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAg                                                                                                                                                                                                                     <  5:177146‑M1/56‑1 (MQ=255)
                                                                                                                                                                                                                       aTGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAGGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATc                                                                                                                                                                                                   >  6:963437/1‑129 (MQ=255)
                                                                                                                                                                                                                       aTGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGc                                                                                                                                                                                                                              <  2:79158/102‑1 (MQ=255)
                                                                                                                                                                                                                         ggtcgatgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTc                                                                                                                                                                              >  6:664437‑M1/54‑148 (MQ=255)
                                                                                                                                                                                                                           ggggtgatggaagacatgctcatcaagttnnccatgattttatgcatctttCATTGCAATANCAGTTGGTCCATAAAAAGGGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAANTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACcgcg                                             >  3:62947‑M1/52‑275 (MQ=255)
                                                                                                                                                                                                                           aggaggaggAGAAGTTGGTTTACGCGCGTNNNAGATTGGAACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGACACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACcgcg                                             <  3:157691/268‑1 (MQ=255)
                                                                                                                                                                                                                              gcgcGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCGGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGAACTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAACAAAGCTGAAAGCCTTAGCTCATCCCACGAAAACGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATTAGCTTCTCAGGGCTGCGGCGATACCGAGCAg                                          >  2:97702/1‑275 (MQ=255)
                                                                                                                                                                                                                               tgctggaagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGt                                         >  2:127062‑M1/48‑275 (MQ=255)
                                                                                                                                                                                                                               cgcgGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGt                                         >  1:14853/1‑275 (MQ=255)
                                                                                                                                                                                                                                     aagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCaaa                                                                                                                                                                                                                       >  8:927496‑M1/42‑95 (MQ=255)
                                                                                                                                                                                                                                     aagacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGaa                                                                                                                                                                                              >  8:431761‑M1/42‑120 (MQ=255)
                                                                                                                                                                                                                                      agacattcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCt                                                                                                                                                                 <  6:786404‑M1/108‑1 (MQ=255)
                                                                                                                                                                                                                                           ttcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTg                                                                                                                                                                                                                                  <  8:273563‑M1/43‑1 (MQ=255)
                                                                                                                                                                                                                                            tcgcatcaagttcgccatgatttgtcgcatcgttCAt                                                                                                                                                                                                                                                                          <  7:554232‑M1/3‑1 (MQ=255)
                                                                                                                                                                                                                                            tcgcatcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGAATTGGAGCTGTCAAAAGACCGACGCATTGAGGATc                                                                                                                                                                                                   <  8:356657‑M1/74‑1 (MQ=255)
                                                                                                                                                                                                                                               catcaagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCaa                                                                                                                                                                                        >  6:264260‑M1/32‑116 (MQ=255)
                                                                                                                                                                                                                                                atcaagttcgccatgatttgtcgtaacgttCATTGAAATATCAGTTGACCCAGAAAAAGCGGCATCAACATTTGAGCTGACAAAAGACCGACGCATTGAGGATCTTGAAAGTCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTTttatta                              >  1:78703‑M1/31‑269 (MQ=255)
                                                                                                                                                                                                                                                  caagttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTaa                                                                                                                                                      >  8:912999‑M1/29‑147 (MQ=255)
                                                                                                                                                                                                                                                    agttcgctatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCtt                                                                                                                                                                <  7:1051783‑M1/109‑1 (MQ=255)
                                                                                                                                                                                                                                                     gttcgccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCg                                                                                                                                                                                   >  8:504626‑M1/26‑115 (MQ=255)
                                                                                                                                                                                                                                                     cgcTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGaaaaa                                                                                                                                                                                                                                                 >  6:607066/1‑53 (MQ=255)
                                                                                                                                                                                                                                                     cgcTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGaaaaa                                                                                                                                                                                                                                                 <  5:607066/53‑1 (MQ=255)
                                                                                                                                                                                                                                                          ccatgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGa                                                                                                                                             <  6:224119‑M1/128‑1 (MQ=255)
                                                                                                                                                                                                                                                           catgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCt                                                                                                                                                                             <  6:351803‑M1/96‑1 (MQ=255)
                                                                                                                                                                                                                                                           catgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCt                                                                                                                                                                             >  5:351803‑M1/20‑115 (MQ=255)
                                                                                                                                                                                                                                                           catgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCt                                                                                                                                                                 <  6:1036984‑M1/108‑1 (MQ=255)
                                                                                                                                                                                                                                                            atgatttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTc                                                                                                                                                                              >  7:158029‑M1/19‑113 (MQ=255)
                                                                                                                                                                                                                                                              ttGGCACCAAAAGAAACATTGCAATATCAGTTGATCAAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTTTTATTATCATCTAAAGGCTCTCAGCa          <  2:477189/275‑1 (MQ=255)
                                                                                                                                                                                                                                                              gatgttgcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTTTTATTATCATCTAAAGGCTCTCAGCa          >  4:454146‑M1/17‑275 (MQ=255)
                                                                                                                                                                                                                                                               atttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCAtt                                                                                                                                                                                                                                   <  6:403886‑M1/42‑1 (MQ=255)
                                                                                                                                                                                                                                                               atttgtcgcatcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCAtt                                                                                                                                                                                                                                   >  5:403886‑M1/16‑57 (MQ=255)
                                                                                                                                                                                                                                                                 gCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCtt                                                                                                                                      <  5:721106/148‑1 (MQ=255)
                                                                                                                                                                                                                                                                    ccAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGc                                                                                                                                                                                                                                      >  6:1068714/1‑49 (MQ=255)
                                                                                                                                                                                                                                                                    ccAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTa                                                                                                                                                               >  5:891043/1‑120 (MQ=255)
                                                                                                                                                                                                                                                                      aaaaGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGa                                                                                                                                                                                                        <  5:111197/77‑1 (MQ=255)
                                                                                                                                                                                                                                                                       catcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGaa                                                                                                                                                                         >  5:221396‑M1/8‑107 (MQ=255)
                                                                                                                                                                                                                                                                        atcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCt                                                                                                                                                                                                  <  7:822243‑M1/75‑1 (MQ=255)
                                                                                                                                                                                                                                                                         tcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGaa                                                                                                                                                                                              <  7:1005602‑M1/79‑1 (MQ=255)
                                                                                                                                                                                                                                                                         tcgttCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATc                                                                                                                              >  7:1125718‑M1/6‑148 (MQ=255)
                                                                                                                                                                                                                                                                         aGAAACATTGCAATATCAGTTGATCCAGAAAAAGTGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCt                                                                                                                                                                             <  8:76454/101‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCa                                                                                                                                                                                         >  6:144300‑M1/2‑85 (MQ=255)
                                                                                                                                                                                                                                                                             tCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTc                                                                                                                                                                              >  5:452193‑M1/2‑96 (MQ=255)
                                                                                                                                                                                                                                                                             tCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTc                                                                                                                                                                              <  6:452193‑M1/95‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGaa                                                                                                                                            >  7:293203‑M1/2‑130 (MQ=255)
                                                                                                                                                                                                                                                                             tCATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCAc                                                                                                                          <  6:717764‑M1/147‑1 (MQ=255)
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                          
TGGTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTATGAAAAACATGGAGAAAAAGGTTTAATTCCCAAACCTAAAGGCGTTAGTGCTGATCCAGAGTTGCGTATTAAGGTCGTGAAAGCTGTGATCGAGCAGCACATGTCCCTTAATCAGGCTGCTGCTCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTTTTATTATCATCTAAAGGCTCTCAGCAAGCCTGAC  >  NC_000913/3720775‑3721311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.