New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4171473	32 (0.200)	7 (0.050)	5/256	NT	18.5%	noncoding (2833/2904 nt)	rrlB	23S ribosomal RNA of rrnB operon
	?	NC_000913	= 4212854	NA (NA)					noncoding (2812/2904 nt)	rrlE	23S ribosomal RNA of rrnE operon

TTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAGTTCGGTCCCTATCTGCCGTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGAC‑GCATCACTGGTGTTCGGGTTGTCATGCCAATGGCACTGCCCGGTAGCTAAATGCGGAAGAGATAAGTGCTGAAAGCATCTAAGCACGAAACTTGCCCCGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAAC  >  NC_000913/4171201‑4171746                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                  tttAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAGTTCGGTCCCTATCTGCCGTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGAC‑GCATCACTGGTGTTCGGGTTGTCATGCCAATGGCACTGCCCGGTAGCTAAATGCGGAAGAGATAAGTGCTGAAAGCATCTAAGCACGAAACTTGCCCCGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAACCGACAACGTTca                                                                                                                                                                                                                                                                                 >  4:224256‑M1/1‑273 (MQ=255)                                            ttgggTCCCTATATGGCGTGGGGCCGGGAGAACTGGGGGGGGCTGCTCCTAGTACGAGAGGCACGGAGTGGAC‑GTATAACTGGTGTTCGGGTTGTCATGCCAATGGCACTGCCCGGTAGCTAAATGCTGAAGAGATAAGGGCGGAAAGCATCTAAGAACGAAACTTGCCCCGAGATGAGTTCTCACTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGGCGGGTGTGTAGGCGCAGCGATGCGTTGAGCTAACCgg                                                                                                                                                                                                                                       <  4:311828/271‑1 (MQ=1)                                                                ggggcTGGAGAAGTTGGGGGGGCGGCTCCTAGGACGAGAGGACCGGAATGGAC‑GCATCACTGGTGTTCGGGTTGTCATGCCAATGGCACTGCCCGGTAGCTAAATGCGGAAGAGATAAGTGCTGAAAGCATCTAAGCACGAAACTTGCCCCGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCt                                                                                                                                                                                                                   <  1:148540/271‑1 (MQ=0)                                                                                                         acccgggTGGACGGCATCACTTGGGTTCGGGTTTGCAGGCCAATGGCACGGCCCGGTAACTAAATGCGGAAGAGATAAGTGCTGAAAGCATCTAAGCAAGAAACTTGCCCCGAGATGAGTTCTCCCTGACGCTTTAAGGGTACTGAGGGAACGTGGAAGACGACGACGTTGATAGGCCAGGTGGGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAGGCTGTTTTGGCGGATGAGagaa                                                                                                                                                                           <  4:263952/268‑1 (MQ=1)                                                                                                                     cgcattaagggtggtCTGGTTTGCATCNNAATGGCACTGACCGGTAGCTAAATGCGGAANAGAAAAGTGCTGAAAGCATCTAAGCACGAAACTTGCCCCGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGANGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGcc                                                                                                                                                                <  3:58490/264‑1 (MQ=1)                                                                                                                                                                                         gCTTAAAGCATCTAAGCACGAAACTTGCCCCGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGcgcg                                                                                            <  2:501099/273‑1 (MQ=14)                                                                                                                                                                                             aaaaCATCTAAAAAAGAAACTTGCCCCTGGATAAGTTTTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGCAGACGACGACGTTGATAGGCCGGGTGTGTAAGAGCAGCGATGCGTGTAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCggtggt                                                                                       <  4:381947/274‑1 (MQ=11)                                                                                                                                                                                             aaaGCATCTAAGCACGAAACTTGCCCCGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTc                                                                                      <  4:401943/275‑1 (MQ=31)                                                                                                                                                                                             aaaGCATCTAAGCACGAAACTTGCCCCGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACCTTGATTGGCCGGGTTTGTAAGCGCAGCGATGCCTTGGGCTAACCGGTACTAATGAACCGTTAGGCTTAACCTTACAACGCCGCAGCTGTTTTGGCGGAAGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAAACCAAAAGCGGTCCGATAAAACAGAATTTTACTGGCGGCAGTAGCCCggttggt                                                                                      >  4:199348/1‑271 (MQ=11)                                                                                                                                                                                                  aTCTAAGGACGAAAATGTCCCCGGGTTGAGGTTTCCCTGAACCTTTAAGGGGCCGGAAGGAACGTGGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGCGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCAcc                                                                                 <  4:143251/275‑1 (MQ=11)                                                                                                                                                                                                  aTCTAAGCACGAAACTTGCCCCGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCAcc                                                                                 >  2:523786/1‑275 (MQ=31)                                                                                                                                                                                                      aaGGACGAAACTTGCCCCGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAgcgc                                                                                             <  2:536040/259‑1 (MQ=14)                                                                                                                                                                                                        gcccGAAACTTGCCCCGAGAGTAGTTCTCCCTGGCCCTTTGAGGGGCCTGAAGGAAAGTTGAAGACGACGACGTGGAGAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGAcc                                                                            <  4:16464/271‑1 (MQ=255)                                                                                                                                                                                                                   gCCCCGGGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACt                                                                <  4:161677/275‑1 (MQ=14)                                                                                                                                                                                                                      ccGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTT                                                                                                                                                                                                                                                                                   <  7:275731‑M1/61‑1 (MQ=255)                                                                                                                                                                                                                      ccGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTT                                                                                                                                                                                                                                                                                   >  6:816718‑M1/1‑61 (MQ=255)                                                                                                                                                                                                                      ccGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTT                                                                                                                                                                                                                                                                                   >  8:275731‑M1/1‑61 (MQ=255)                                                                                                                                                                                                                      ccGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTT                                                                                                                                                                                                                                                                                   <  5:816718‑M1/61‑1 (MQ=255)                                                                                                                                                                                                                       cGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTT                                                                                                                                                                                                                                                                                   <  7:488389‑M1/60‑1 (MQ=255)                                                                                                                                                                                                                       cGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTT                                                                                                                                                                                                                                                                                   >  8:488389‑M1/1‑60 (MQ=255)                                                                                                                                                                                                                              aGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaaa                                                     <  2:75820/275‑1 (MQ=31)                                                                                                                                                                                                                                     ccTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTa                                              <  2:318894/275‑1 (MQ=31)                                                                                                                                                                                                                                        gACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGAAACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGACTTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACCCCGTAggg                                           >  4:163368/1‑273 (MQ=14)                                                                                                                                                                                                                                             tttAAGGGTCCTGAAGGAACTTTGAAGACGACGACGTTGGTAAGCCGGGTGTGTAAGGGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGa                                       <  4:417742/274‑1 (MQ=14)                                                                                                                                                                                                                                             tttAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAACACAGAATTTGCCTGGCGGAAGTAGCGCGGTGGTCCAACCGGACCCCATGCCTAACTCAAAAGTGAAACGCCGTAGCGCCGAt                                      >  4:424620/1‑275 (MQ=9)                                                                                                                                                                                                                                             tttAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGa                                       <  4:8506/274‑1 (MQ=31)                                                                                                                                                                                                                                             tttAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGAGAAACGCCGTAGCGCCg                                        >  2:266348/1‑273 (MQ=14)                                                                                                                                                                                                                                              ttAAGGGGCCTAAAGGAAGTTTGAAGACGACGACGTTGATAGGCCGGGTGGTTGAGCGCAGCGATGCGTGGAGCTAACAGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGGCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATg                                     <  4:69682/275‑1 (MQ=11)                                                                                                                                                                                                                                               tAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATgg                                    <  2:253580/275‑1 (MQ=31)                                                                                                                                                                                                                                               tAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCCATg                                     >  4:129050/1‑274 (MQ=14)                                                                                                                                                                                                                                                     tCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCACAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATTCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAgtg                               >  2:361934/1‑274 (MQ=14)                                                                                                                                                                                                                                                      ccTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGtgtg                             >  1:64664/1‑275 (MQ=31)                                                                                                                                                                                                                                                      ccTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCCATGGTAgtgt                              >  2:141094/1‑274 (MQ=14)                                                                                                                                                                                                                                                       cTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGATAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGATGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGTGGCGGTCCCACCTGACCCCAAGCCGAACCCAGCAGTGACACGCCGTAgcg                                           >  2:417743/1‑260 (MQ=255)                                                                                                                                                                                                                                                       cTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGCTGGTAGTgggg                            >  2:216431/1‑275 (MQ=14)                                                                                                                                                                                                                                                       cTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTgg                            >  2:280260/1‑275 (MQ=31)                                                                                                                                                                                                                                                         gAAGGAACGTTGAAGACGACGACGTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgcttt                                                                                                                                                                                                                  <  6:239417‑M1/91‑66 (MQ=255)                                                                                                                                                                                                                                                         gAAGGAACGTTGAAGACGACGACGTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgcttt                                                                                                                                                                                                                  >  5:239417‑M1/1‑26 (MQ=255)                                                                                                                                                                                                                                                          aaGGAACGTTGAAGACGACGACGTTccttcaggacccttaaagggtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccga                                                                                                                                                        >  5:510929‑M1/1‑25 (MQ=255)                                                                                                                                                                                                                                                          aaGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGt                         <  2:199349/275‑1 (MQ=31)                                                                                                                                                                                                                                                              aaCGTTGAAGACGACGACGTTccttcaggactctcaaggagtcagggagaa                                                                                                                                                                                                                                                     <  5:47999‑M1/51‑31 (MQ=255)                                                                                                                                                                                                                                                              aaCGTTGAAGACGACGACGTTccttcaggactctcaaggagtcagggagaa                                                                                                                                                                                                                                                     <  7:841145‑M1/51‑31 (MQ=255)                                                                                                                                                                                                                                                              aaCGTTGAAGACGACGACGTTccttcaggactctcaaggagtcagggagaa                                                                                                                                                                                                                                                     >  6:47999‑M1/1‑21 (MQ=255)                                                                                                                                                                                                                                                              aaCGTTGAAGACGACGACGTTccttcaggactctcaaggagtcagggagaa                                                                                                                                                                                                                                                     >  8:841145‑M1/1‑21 (MQ=255)                                                                                                                                                                                                                                                               aCGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGCCTGATAAAACAGAATTTGCCTGGGGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAAGTCAGAAGTGAAACGCCGTAGCGCTGATGGTAGTGTGGGGTCTccc                    >  2:16007/1‑275 (MQ=14)                                                                                                                                                                                                                                                                    gAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATg                <  1:75472/274‑1 (MQ=31)                                                                                                                                                                                                                                                                              acgTTccttcaggactctcaaggagtcagggagcactcatctcggggcaagtttcgtgcttagatgctttc                                                                                                                                                                                                                 >  8:679073‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                                                              acgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccact                                                                                                                                    >  5:1615‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                                                              acgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccact                                                                                                                                    >  8:618226‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                                                              acgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccact                                                                                                                                    >  7:928669‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                                                              acgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccga                                                                                                                                                        >  7:882761‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                                                              acgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccga                                                                                                                                                        <  6:386280‑M1/128‑124 (MQ=255)                                                                                                                                                                                                                                                                              acgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccga                                                                                                                                                        <  8:882761‑M1/128‑124 (MQ=255)                                                                                                                                                                                                                                                                              acgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccga                                                                                                                                                        >  5:386280‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                                                              acgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatc                                                                                                                                                                                                       >  6:40618‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                                                              acgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatc                                                                                                                                                                                                       <  5:40618‑M1/81‑77 (MQ=255)                                                                                                                                                                                                                                                                              acgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttc                                                                                                                                                                                                                 <  7:679073‑M1/71‑67 (MQ=255)                                                                                                                                                                                                                                                                              acgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtt                                                                                                                                                                                                                                   >  7:312707‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                                                              acgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtt                                                                                                                                                                                                                                   <  8:312707‑M1/53‑49 (MQ=255)                                                                                                                                                                                                                                                                              acgTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAggg     <  4:280259/275‑1 (MQ=31)                                                                                                                                                                                                                                                                               cgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggtcctctcgtactaggagcagcccccctcagttctccagcgcccacggcagatagggaccgaactgtctcacgacgttctaaacccagctcgcgtaccactttaaatggcgaacagccataccct    <  4:74654‑M1/275‑272 (MQ=255)                                                                                                                                                                                                                                                                               cgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttaga                                                                                                                                                                                                                        <  7:1122285‑M1/63‑60 (MQ=255)                                                                                                                                                                                                                                                                               cgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttaga                                                                                                                                                                                                                        >  8:1122285‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                                                                               cgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttaga                                                                                                                                                                                                                        <  7:805834‑M1/63‑60 (MQ=255)                                                                                                                                                                                                                                                                               cgTTccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttaga                                                                                                                                                                                                                        >  8:805834‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                                                                                gTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGaa   <  4:471816/275‑1 (MQ=31)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaatgagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggtcctctcgtactaggagcagcccccctcagttctccagcgcccacggcagatagggaccgaactgtctcacgacgttctaaacccagctcgcgtaccactttaaatggcgaacagccatacccttg  <  2:88129‑M1/275‑274 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaagtagtcagggagaactactctcggtgcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccacgccggtcctctcgtactaggagcagcccccctcagttctccagcgcccacggcagatagggaccgaactgtctcacgacgttctaaacccagctcgcgtaccactttaaatggcgaacagccatacccttg  <  2:26596‑M1/275‑274 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggtgtcagggagaactcatctcggggcaagtttcgtgcttagatgcttt                                                                                                                                                                                                                  >  5:1020973‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggtgtcagggagaactcatctcggggcaagtttcgtgcttagatgcttt                                                                                                                                                                                                                  <  6:1020973‑M1/67‑66 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtcc                                                                                                                                       >  6:628466‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtcc                                                                                                                                       <  5:628466‑M1/142‑141 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtga                                                                                                                                              >  6:860878‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtga                                                                                                                                              <  5:860878‑M1/135‑134 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccat                                                                                                                                                                        <  8:360582‑M1/109‑108 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccat                                                                                                                                                                        >  7:360582‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttc                                                                                                                                                                                                  >  5:1080027‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttc                                                                                                                                                                                                  <  6:1080027‑M1/83‑82 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctt                                                                                                                                                                                                                   <  6:814180‑M1/66‑65 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctt                                                                                                                                                                                                                   >  5:814180‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttag                                                                                                                                                                                                                         >  5:1110722‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttag                                                                                                                                                                                                                         <  6:1110722‑M1/60‑59 (MQ=255)                                                                                                                                                                                                                                                                                 ttccttcaggactctcaaggagtcagggagaactaatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggtcctctcgtactaggagcagcccccctcagttctccagcgcccacggcagatagggaccgaactgtctcacgacgttctaaacccagctcgcgtaccactttaaatggcgaacagccataccctt   <  2:125241‑M1/274‑273 (MQ=255)                                                                                                                                                                                                                                                                                 gtccgtccggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggtcctctcgtactaggagcagcccccctcagttctccagcgcccacggcagatagggaccgaactgtctcacgacgttctaaacccagctcgcgtaccactttaaatggcgaacagccatacccttg  <  1:127019‑M1/274‑274 (MQ=255)                                                                                                                                                                                                                                                                                  tccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccggtcctctcgtactaggagcagcccccctcagttctccagcgcccacggcagatagggaccgaactgtctcacgacgttctaaacccagctcgcgtaccactttaaatggcgaacagccatacc      >  1:40064‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                                                                  tccttcaggactctcaaggagtcagggagaactcatctcggggcaagtttcgtgcttagatgctttcagcacttatctcttccgcatttagctaccgggcagtgccattggcatgacaacccgaacaccagtgatgcgtccactccgg                                                                                                                                <  8:70862‑M1/148‑148 (MQ=255)                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                  TTTAAAGTGGTACGCGAGCTGGGTTTAGAACGTCGTGAGACAGTTCGGTCCCTATCTGCCGTGGGCGCTGGAGAACTGAGGGGGGCTGCTCCTAGTACGAGAGGACCGGAGTGGAC‑GCATCACTGGTGTTCGGGTTGTCATGCCAATGGCACTGCCCGGTAGCTAAATGCGGAAGAGATAAGTGCTGAAAGCATCTAAGCACGAAACTTGCCCCGAGATGAGTTCTCCCTGACCCTTTAAGGGTCCTGAAGGAACGTTGAAGACGACGACGTTGATAGGCCGGGTGTGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAAC  >  NC_000913/4171201‑4171746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.