BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4190599	107 (0.680)	6 (0.040)	5/246	NT	5.5%	intergenic (‑112/+136)	sroH/thiH	novel sRNA, function unknown/tyrosine lyase, involved in thiamine‑thiazole moiety synthesis
*	?	NC_000913	= 4190612	107 (0.730)	6 (0.040)	5/246	NT	5.5%	intergenic (‑125/+123)	sroH/thiH	novel sRNA, function unknown/tyrosine lyase, involved in thiamine‑thiazole moiety synthesis

Only 100 of 166 total aligned reads displayed.

GGTTTCGCCAGAGAATTATCTCTGGTATTCAGAACGCCATTACCGGACTTTGCCTTGACCTTGCGATAATCGCAGGTTGCGGGATGTCTGAATTTCTTCAGTCTGCTGCATCCTGGAAGATGAGAACATGTGTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTCATAGTCTTTGCGAGGCGCGTCCCAGATAGCTGTCCCAGTCTTTCCATACCGGCTGCAAACCCTGAGCGGTTAACGCGGCAGCAACCGCTTCCGGTCTGCGATCGTCGTGCGGTGAGAACTGTTCCAACTCGGGGT  >  NC_000913/4190345‑4190871

gggttCGCCAGAGAATTATCGCTGGGATTCAGAACGCCATGACCGGACTTTGCCTTGACCTTGCGATAATCGCAGGTTGCGGGATGTCTGAATTTCTTCAGTCTGCTGCATCCTGGAAGATGAGAACATGTGTTCTTATTTTCGTCTCTATCAGAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGcc                                                                                                                                                                                                                                                              <  2:441250/272‑1 (MQ=255)

   ttCGCCAGAGAATTATCTCTGGTATTCAGAACGCCATTACCGGACTTTGCCTTGACCTTGCGATAATCGCAGGTTGCGGGATGTCTGAATTTCTTCAGTCTGCTGCATCCTGGAAGATGAGAACATGTGTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTtttcgccctg                                                                                                                                                                                                                                                           >  2:279120‑M2/1‑265 (MQ=255)

                          aTTCAGAACGCCATTACCGGACTTTGCCTTGACCTTGCGATAATCGCAGGTTGCGGGATGTCTGAATTTCTTCAGTCTGCTGCATCCTGGAAGATGAGAACATGTGTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTGCGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCa                                                                                                                                                                                                                                     <  1:12090/274‑1 (MQ=255)

                            tCAGAACGCCATTACCGGACTTTGCCTTGACCTTGCGATAATCGCAGGTTGCGGGATGTCTGAATTTCTTCAGTCTGCTGCATCCTGGAAGATGAGAACATGTGTTCTTATTTTCGTCTCTATCATAGTTGATTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGAAGGGCTACACGAGGAATAAGCTTTTTGCCCTGGACAACATTCCTGCTGACGGCACTa                                                                                                                                                                                                                                  >  4:521121/1‑275 (MQ=255)

                                  cGCCATTACCGGACTTTGCCTTGACCTTGCGATAATCGCAGGTTGCGGGATGTCTGGATTTCTTCAGTCTGCTGCATCCTGGAAGATGAGAACATGTGTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATaa                                                                                                                                                                                                                            >  2:41320/1‑275 (MQ=255)

                                  cGCCATTACCGGACTTTGCCTTGACCTTGCGATAATCGCAGGTTGCGGGATGTCTGAATTTCTTCAGTCTGCTGCATCCTGGAAGATGAGAACATGTGTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCGttt                                                                                                                                                                                                                                                                  <  1:83157‑M2/237‑4 (MQ=255)

                                      aTTACCGGACGTGTCCTTNCCCTTGCGATAATCNNAGGTTTCGGTATGTTTGAATTTCTTCCGTCTGCTGCATCCTTGAAGTTGATAACATGTGTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGATCAACAGGCGATGTCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTtttcgcc                                                                                                                                                                                                                                                              >  3:83157‑M2/1‑230 (MQ=255)

                                                         aCCTTGCGATAATCGCAGGTTGCGGGATGTCTGAATTTCTTCAGTCTGCTGCATCCTGGAAGATGAGAACATGTGTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTttt                                                                                                                                                                                                                                                                  <  3:149429‑M2/214‑4 (MQ=255)

                                                           cTTGCGGTAATTGCAGGTTGCGGGATTTATGGATTTCTTCAGTCTGCTGCATCCTGGAAGATGAGAACATTTGTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAAcc                                                                                                                                                                                                    <  4:41319/274‑1 (MQ=255)

                                                             tGCGATAATCGCAGGTTGCGGGATGTCTGAATTTCTTCAGTCTGCTGCATCCTGGAAGATGAGAACATGTGTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCtt                                                                                                                                                                                                  >  4:103069/1‑274 (MQ=255)

                                                                                     gTCTGAATTTCTTCAGTCTGCTGCATCCTGGAAGATGAGAACATGTGTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCt                                                                                                                                                                         <  1:10636/275‑1 (MQ=255)

                                                                                                         ctgcATCCTGGAAGATGAGAACATGTGTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAAt                                                                                                                                                               >  2:294/1‑265 (MQ=255)

                                                                                                          tgcATCCTGGAAGATGAGAACATGTGTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCctg                                                                                                                                                                                                                                              >  2:539344/1‑185 (MQ=255)

                                                                                                              tCCTGGAGGATGAGAACATGTGTTCTTATTTTNGTCTNTATCATAGTTGAGTATTTACTCTNTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGa                                                                                                                                                                                                                                          <  4:539343/185‑1 (MQ=255)

                                                                                                                        tGAGAACATGTGTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTTTTTCATTGCCCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAATAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCTTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAACGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTCAt                                                                                                                                       >  2:58885/1‑274 (MQ=255)

                                                                                                                         gagaACATGTGTTCTTATTTTCGTCCCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCACTGCTCAACAGGCGATGGCTTCTGACTTTGCCTTACGGAATTTTTAAGAAAGGCCAGGCTAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACAATAAAAAAACACCACGCTTTCAACAACCTTGCTTTTTTCATCCTCCGAAGCGGCCCGGTATAACTTTAGGTTCTTACATTCCGTCTCCTa                                                                                                                                      >  4:312647/1‑274 (MQ=255)

                                                                                                                             aCATGTGTTCTTATTTTCGTCTCTATCATAGTTGCGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCCTTACGGAATTTTTAAGAAAGGCAGTGCGCAACGAGTaagaag                                                                                                                                                                                                                                                                       >  1:23667/1‑141 (MQ=255)

                                                                                                                                 gtntTCTTANTTTNGTCTCTANCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCGTCAGACTTGGCATGACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTtc                                                                                                                                                                                                                                                                   >  3:23667‑M2/1‑139 (MQ=255)

                                                                                                                                 gtgtTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAg                                                                                                                                                                                                                                                                              >  3:136982/1‑130 (MQ=255)

                                                                                                                                  tgtTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTAATAGTCTTTGCGa                                                                                                                            >  2:266810/1‑275 (MQ=255)

                                                                                                                                   gtTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTttt                                                                                                                                                                                                                                                                  >  7:481450‑M2/1‑137 (MQ=255)

                                                                                                                                     tCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAgg                                                                                                                                                                                                                                                                             >  6:756593/1‑127 (MQ=255)

                                                                                                                                     tCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAgg                                                                                                                                                                                                                                                                             <  5:756593/127‑1 (MQ=255)

                                                                                                                                        tATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGacaac                                                                                                                                                                                                                                                     <  8:412543/148‑1 (MQ=255)

                                                                                                                                            ttCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGa                                                                                                                                                                                                                                                                               <  5:350416/118‑1 (MQ=255)

                                                                                                                                            ttCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGATTTCAACAACCTTGCGTTTTTCATCTTCAGTAGCGGCTCGGAATAAATTTACGTTATTACATTCCGTCTCATAGTCTTTGCGAGGCGCGTcac                                                                                                                  >  1:140537/1‑273 (MQ=255)

                                                                                                                                              cGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGa                                                                                                                                                                                                                                                                               <  7:332694/116‑1 (MQ=255)

                                                                                                                                                 ctctATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGacaaca                                                                                                                                                                                                                                                    <  8:497299/140‑1 (MQ=255)

                                                                                                                                                  tctAGCATAGGTGAGTATTTACTCTCTTACAATCCGATCTCTTTCATTTCTCAACAGGCTATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCATGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTCATAGTCTTTGCGAGGCGCGTCCCAGATAg                                                                                                            <  4:260916/275‑1 (MQ=255)

                                                                                                                                                      tCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTt                                                                                                                                                                                                                                                                    >  7:43170‑M2/1‑118 (MQ=255)

                                                                                                                                                        aTAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAg                                                                                                                                                                                                                                                                              >  5:346564/1‑107 (MQ=255)

                                                                                                                                                        aTAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAg                                                                                                                                                                                                                                                                              <  6:346564/107‑1 (MQ=255)

                                                                                                                                                                gTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGgaag                                                                                                                                                                                                                                                                          >  8:101965/1‑103 (MQ=255)

                                                                                                                                                                      aCTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATaaaaaaa                                                                                                                                                                                                                       >  6:659924/1‑148 (MQ=255)

                                                                                                                                                                      aCTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCgg                                                                                                                                                                      >  4:342930/1‑197 (MQ=255)

                                                                                                                                                                      aCTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCACTGGACAACATTCCTGCTGACGGCACTACNATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCAGTAGc                                                                                                                                                                             >  3:79172/1‑190 (MQ=255)

                                                                                                                                                                        tctctTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAaca                                                                                                                                                                                                                     <  5:659924/148‑1 (MQ=255)

                                                                                                                                                                           ctTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTtttcgccc                                                                                                                                                                                                                                                             >  8:419565‑M2/1‑97 (MQ=255)

                                                                                                                                                                           ctTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACCACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGCATAACTTTACGTTCTTACATTCCGTCTAATAGTCTTTGCGAGGCGCGCCCCAGTTAGATGTCCCAGTcctgtctcttatac                                                                                    >  4:515111/1‑261 (MQ=255)

                                                                                                                                                                              aCAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCa                                                                                                                                                                                                                                     <  8:265601/126‑1 (MQ=255)

                                                                                                                                                                               cAATCAGAACTCTTAAATTGCTCAACAGGCGATGGCTTCAGACTTTGCATAACGGAATTTTTAAGAAAGGCAGGGCGAAACAAGGAAGAAGCTTTTCGCCCTGGAAAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTCATAGTCTTTGCGAGGCGCGTCCCAGATAg                                                                                                            <  2:515112/246‑1 (MQ=255)

                                                                                                                                                                                 aTCAGATCTCTTTCATTGCTCAACAGGCGTTGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTCATAGTCTTTGCGAGGCGCGTCCCAGATAGCTg                                                                                                         >  2:451814/1‑247 (MQ=255)

                                                                                                                                                                                 aTCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAAagcttcttcctcgtttcgccc                                                                                                                                                                                                                                                             <  7:529936‑M1/99‑22 (MQ=255)

                                                                                                                                                                                 aTCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAAagcttcttcctcgtttcgccc                                                                                                                                                                                                                                                             >  8:529936‑M1/1‑78 (MQ=255)

                                                                                                                                                                                 aTCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAAagcttcttcctcgtttcgcc                                                                                                                                                                                                                                                              >  6:154317‑M1/1‑78 (MQ=255)

                                                                                                                                                                                 aTCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTCATAGTCTTTGCGAGGCGCGTCCCAGATAGCTGTCCCAGTTTTTCCATACCGTCTACaaa                                                                              >  2:242905/1‑274 (MQ=255)

                                                                                                                                                                                   cAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAAagcttcttc                                                                                                                                                                                                                                                                         <  8:234492‑M1/85‑10 (MQ=255)

                                                                                                                                                                                      aTCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTCTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATCCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCCTCTTTCGTACCGGCCCGGAATAAATTTACGTTCTTACATTCCGTCTCATAGTCTTTGCGAGGCGCGTCCCAGATAGCTGTCCCAGTCTTTCCATACCCGCTGCAAACCCTg                                                                         >  2:158194/1‑274 (MQ=255)

                                                                                                                                                                                       tctcTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCt                                                                                                                                                                                                                                                                     >  6:894626/1‑85 (MQ=255)

                                                                                                                                                                                       tctcTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCt                                                                                                                                                                                                                                                                     <  5:894626/85‑1 (MQ=255)

                                                                                                                                                                                            ttCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAac                                                                                                                                                                                                                      >  7:924254/1‑127 (MQ=255)

                                                                                                                                                                                            ttCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAac                                                                                                                                                                                                                      >  7:995346/1‑127 (MQ=255)

                                                                                                                                                                                            ttCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAACTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGAc                                                                                                                                                                                                                                         >  8:960024/1‑108 (MQ=255)

                                                                                                                                                                                                       aCAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAac                                                                                                                                                                                                                      >  8:277486/1‑116 (MQ=255)

                                                                                                                                                                                                       aCAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAac                                                                                                                                                                                                                      <  7:277486/116‑1 (MQ=255)

                                                                                                                                                                                                          ggCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATaaaaaa                                                                                                                                                                                                                        <  7:1017572/111‑1 (MQ=255)

                                                                                                                                                                                                           gCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTGCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACa                                                                                                                                                  >  4:378700/1‑180 (MQ=255)

                                                                                                                                                                                                              aTGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGCAACGAGGAAGAAGCTtttcgc                                                                                                                                                                                                                                                               <  6:372345‑M2/68‑7 (MQ=255)

                                                                                                                                                                                                              aTGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTtttcgc                                                                                                                                                                                                                                                               >  5:372345‑M2/1‑62 (MQ=255)

                                                                                                                                                                                                              aTGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTa                                                                                                                                                                                                                                  >  8:611297/1‑97 (MQ=255)

                                                                                                                                                                                                               tGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGc                                                                                                                                                                                                                                                                      <  7:1069370/60‑1 (MQ=255)

                                                                                                                                                                                                               tGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTcc                                                                                                                                              <  2:378701/180‑1 (MQ=255)

                                                                                                                                                                                                                 gCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGtt                                                                                                                                                                                             >  8:780899/1‑131 (MQ=255)

                                                                                                                                                                                                                 gCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTa                                                                                                                                                            <  4:491366/164‑1 (MQ=255)

                                                                                                                                                                                                                  cTTCAGACTTTGCATTACGGAATTGTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCACCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCACCAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTCATAGTCTTTGCGAGGCGCGTCCCAGATAGCTGTCCCAGTCTTTCCATACCGGCTGCAAACCCTGAGCGGTTAACGCGGCAGCAACCGCTTCCg                                            <  2:498829/275‑1 (MQ=255)

                                                                                                                                                                                                                    tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAgg                                                                                                                                                                                                                                                                             <  6:448310/48‑1 (MQ=255)

                                                                                                                                                                                                                    tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAgg                                                                                                                                                                                                                                                                             >  5:448310/1‑48 (MQ=255)

                                                                                                                                                                                                                    tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATaaaaaa                                                                                                                                                                                                                        >  5:1058904/1‑101 (MQ=255)

                                                                                                                                                                                                                    tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATaaaaaa                                                                                                                                                                                                                        <  6:1058904/101‑1 (MQ=255)

                                                                                                                                                                                                                    tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAAcaca                                                                                                                                                                                                                   >  8:1020117/1‑106 (MQ=255)

                                                                                                                                                                                                                    tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAAcaca                                                                                                                                                                                                                   <  7:696684/106‑1 (MQ=255)

                                                                                                                                                                                                                    tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAAcaca                                                                                                                                                                                                                   <  7:1020117/106‑1 (MQ=255)

                                                                                                                                                                                                                    tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCt                                                                                                                                                                                                              <  8:904486/111‑1 (MQ=255)

                                                                                                                                                                                                                    tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCt                                                                                                                                                                                                              >  7:904486/1‑111 (MQ=255)

                                                                                                                                                                                                                           ttGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGc                                                                                                                                                                             >  4:485800/1‑137 (MQ=255)

                                                                                                                                                                                                                           ttGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATa                                                                                                                                                                  >  5:551362/1‑148 (MQ=255)

                                                                                                                                                                                                                            tGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAAtt                                                                                                                                                              >  2:19990/1‑151 (MQ=255)

                                                                                                                                                                                                                               aTTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCt                                                                                                                                                                         <  2:485801/137‑1 (MQ=255)

                                                                                                                                                                                                                               aTTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTCATAGTCTTTGCGAGGCGCGTCCCAGATAGCTGTCCCAGTCTTTCCATACCGGCTGCAAACCCTGAGCGGTTAACGCGGCAGCAACCGCTTCCGGt                                          <  2:35857/264‑1 (MQ=255)

                                                                                                                                                                                                                                ttACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACAtt                                                                                                                                                <  4:245411/161‑1 (MQ=255)

                                                                                                                                                                                                                                 tACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGCCACTa                                                                                                                                                                                                                                  >  7:237759/1‑78 (MQ=255)

                                                                                                                                                                                                                                      aaTTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTAc                                                                                                                                                                                                                                 <  5:1082216/74‑1 (MQ=255)

                                                                                                                                                                                                                                           ttAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTCATAGTCTTTGCGAGGCGCGTCCCAGATAGCTGTCCCAGTCTTTCCATACCGGCTGCAAACCCTGAGCGGTTAACGCGGCAGCAACCGCTTCCGGTCTGCGATCGTCGTGCGGTGAGaa                   <  4:186221/275‑1 (MQ=255)

                                                                                                                                                                                                                                             aaGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTAGATTCCGTCTCATAGTCTTTGCGAGGCGCGTCCCAGATAGCTGTCCCAGTCTTTCCATACCGGCTGCAACACCTTAGCGGTTAACTCGGCAGCACCCGCTACCGGTAGGCCATCGTCGTGCgggtggaact                 >  4:486410/1‑267 (MQ=255)

                                                                                                                                                                                                                                                   ggCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCt                                                                                                                                                      <  5:57262/136‑1 (MQ=255)

                                                                                                                                                                                                                                                   ggCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCt                                                                                                                                                      >  6:57262/1‑136 (MQ=255)

                                                                                                                                                                                                                                                       gggCGAAAagcttcttcctcgtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgattgtaag                                                                                                                                                                                 <  7:419565‑M1/105‑98 (MQ=255)

                                                                                                                                                                                                                                                       gggCGAAACGAGGAAGAAGCTtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgat                                                                                                                                                                                       <  7:529936‑M2/99‑79 (MQ=255)

                                                                                                                                                                                                                                                        ggCGAAAagcttcttcctcgtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgattgtaagagagtaaatactcaactatgatagagacgaaaataagaacacatgttctcatcttccaggatgcagcagactgaagaaattcagacatcccgcaacctgcgattatcgca                                                                   >  1:149429‑M1/1‑7 (MQ=255)

                                                                                                                                                                                                                                                        ggCGAAACGAGGAAGAAGCTtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgat                                                                                                                                                                                       <  5:154317‑M2/98‑79 (MQ=255)

                                                                                                                                                                                                                                                        ggCGAAACGAGGAAGAAGCTtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgat                                                                                                                                                                                       >  6:154317‑M2/1‑20 (MQ=255)

                                                                                                                                                                                                                                                         gCGAAAagcttcttcctcgttgcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccat                                                                                                                                                                                                                    <  6:372345‑M1/68‑63 (MQ=255)

                                                                                                                                                                                                                                                            aaacgcttcttcctcgtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgattgtaagagagtaaatactcaactatgatagagacgaaaataagaacacatgttctcatcttccaggatgcagcagactgaagaaattcagacatcccgcaacctgcgattatcgcaaggtcaaggcaaagtccggtaatggcg                                        <  1:83157‑M1/237‑235 (MQ=255)

                                                                                                                                                                                                                                                            aaaagcttcttcctcgtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgattgtaagagagtaaatactcaactatgatagagacgaaaataagaac                                                                                                                                         <  8:481450‑M1/140‑138 (MQ=255)

                                                                                                                                                                                                                                                             aaCGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTCATAGTCTTTGCGAGGCGCGTCCCAGATAGCTGTCCCAGTCTTTCCATACCGGCTGCAAACCCTGAGCGGTTAACGCGGCAGCAACCGCTTCCGGTCTGCGATCGTCGTGCGGTGAGAACTGTTCCAACTCGGGGt  >  4:478051/1‑274 (MQ=255)

                                                                                                                                                                                                                                                             aaCGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTCATAGTCTTTGCGAGGCGCGTCCCAGATAGCTGTCCCAGTCTTTCCATACCGGCTGCAAACCCTCAGCGGTTAACGCGGCAGCAACCGCTTCCGGTCTGCGATCGTCGTGCGGTGAGAACTGTTCCAACTCGGGGt  >  2:346330/1‑274 (MQ=255)

                                                                                                                                                                                                                                                              aagcttcttcctcgtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgattgtaagagagtaaatactcaactatga                                                                                                                                                            >  7:43170‑M1/1‑1 (MQ=255)

                                                                                                                                                                                                                                                              aagcttcttcctcgtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgattgtaagagagtaaatactcaactatga                                                                                                                                                            <  8:43170‑M1/119‑119 (MQ=255)

                                                                                                                                                                                                                                                              aCGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGt                                                                                                                                                                                <  6:796109/99‑1 (MQ=255)

                                                                                                                                                                                                                                                              aCGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGt                                                                                                                                                                                >  5:796109/1‑99 (MQ=255)

GGTTTCGCCAGAGAATTATCTCTGGTATTCAGAACGCCATTACCGGACTTTGCCTTGACCTTGCGATAATCGCAGGTTGCGGGATGTCTGAATTTCTTCAGTCTGCTGCATCCTGGAAGATGAGAACATGTGTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTCATAGTCTTTGCGAGGCGCGTCCCAGATAGCTGTCCCAGTCTTTCCATACCGGCTGCAAACCCTGAGCGGTTAACGCGGCAGCAACCGCTTCCGGTCTGCGATCGTCGTGCGGTGAGAACTGTTCCAACTCGGGGT  >  NC_000913/4190345‑4190871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.