New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3570872 =141 (0.890)10 (0.070) 8/254 NT 6.9% coding (448/1974 nt) glgX glycogen debranching enzyme
?NC_000913 3570898 = 137 (0.910)coding (422/1974 nt) glgX glycogen debranching enzyme

Only 100 of 175 total aligned reads displayed.

CGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAACTCCCCGTCAATTTGCCGCGCGCAAGGATCAATCAACAACTTCGCCGGGTTAAAGCGATGCCCCTCGGCGGGTTGCCAGGGGCCATGAACGCGATAACCATAACGCAAACCCGGGCGCGCATCCGGCAGATAACCGTGCCAAATGTCGCCACTGTG  >  NC_000913/3570627‑3571166
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                            
cGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCCCGACCGGGATCTCCGGGTGCAAGTACGTTAATTCTTTGACATGGGATTCATAAATGGTGGTGCTGCCGCACGGCGTGCCCGGCGGGGcatcat                                                                                                                                                                                                                                                                           >  4:293610/1‑275 (MQ=255)
    tccaccacAATCATCGCCCCCTGGTTGTAACCCCCGTAGTTACTTAGCCCCATGCGTTTCAGACGTGGTTCACTGGCAAACTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCtt                                                                                                                                                                                                                                                                        <  4:535132/267‑1 (MQ=255)
    gggaGCGCAAACATTGACCCCGGGTTGGAACCCCAGTAGGTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGGAAACTGCGCCACTGGCAGAAGGTCCAGGGCGGGAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCtt                                                                                                                                                                                                                                                                        <  4:490674/271‑1 (MQ=255)
      ccgcccAAACACCGCCACCGGTGTGTCACCTCACGAGTTCCTTAGCCCCATGCGTGCCAGCCTTGTTTCACTGGCGAACTACGCAACTGGCAGCAGTTCCATCGACGTAATGCCCAATTGTCTCAAATAGTTTGTCATCACCTGATGCCCGAGGTCTTTATAAGTGCCACGGATCTCGACCTGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGCGCTTCATAAATGATGGTGCTGCGCCACGGCGTGCGCGGCGGGGCATCATCTTcc                                                                                                                                                                                                                                                                      <  4:286843/269‑1 (MQ=255)
      cAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGTCAAACTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGAGCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGGGCGCGGCGGGGCATCATCTTcc                                                                                                                                                                                                                                                                      <  2:501311/274‑1 (MQ=255)
        gcgcAAACCTCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGGGGTTCACTGGCAAACTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGGCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCa                                                                                                                                                                                                                                                                    <  1:67986/274‑1 (MQ=255)
         cgcAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCGCCACTGGCCGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACTGGGATCTCCGGGTTCAAGTACGTTACTCCTTTGACATGGGCTTCATACATGATGTTGCTGCCCCACGGCCTGCGCGGCTGGGCATCATCTTccacg                                                                                                                                                                                                                                                                   >  4:258606/1‑271 (MQ=255)
              aCATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAACCTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCAt                                                                                                                                                                                                                                                               >  2:91837/1‑273 (MQ=255)
                           gTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAAccacca                                                                                                                                                                                                                                                <  1:11315/275‑1 (MQ=255)
                                             aCTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGCCTTCATAAATGATGTTGCTGCCCAACGGCGTTCTCCGCGGGGCATCATCTTCCCAGTCATAGTTATCAACACCCACTACCCATTTCgcatcc                                                                                                                                                                                                                               >  4:334443/1‑269 (MQ=255)
                                                 aGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTTCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCAATACGCATTTCGGCCCAATcgc                                                                                                                                                                                                                          >  2:518369/1‑275 (MQ=255)
                                                  gCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATggcg                                                                                                                                                                                                                         >  1:33796/1‑275 (MQ=255)
                                                        tGCGTTGCAGACGTGGTTCACTGGCAAACTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCGAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATTGTGCTGCCCCACGGCGTGCGCGGCGGGGGCATCATCTTCCCAGTCCTAGTGATCAACAACCACTACGCCTTTCGGCCCAATGCCGGCGtt                                                                                                                                                                                                                    >  2:459635/1‑275 (MQ=255)
                                                        tGCGTTGCAGACGTGGTTCACTGGCAAACTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTg                                                                                                                                                                                                                   >  2:389763/1‑275 (MQ=255)
                                                             ggcagcggtgtTTCACTGGCAAACTGCGCACCGTGCAACATTTCCAGCGCGTTAATGCCCAAGTGTTCACAATAGTTGATCATCACCGGATGCCCTAGGGATTTATAAGTGCCACTGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCGTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGTGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTcgcg                                                                                                                                                                                                              <  4:211988/268‑1 (MQ=255)
                                                                  ccGTGGTGCCCTGTCAAACGTCCCCATTGGCAGCGGTTCCCGGGCGGTAATGCCCCATTGTTTCAAATAGTTGATCTNCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGCGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGt                                                                                                                                                                                                         <  3:116736/274‑1 (MQ=255)
                                                                    gTGGTTCACTGGCAAACTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCCCGGCGTGCGCGGCGGGGCCTCATCTTCCCAGTCATAGTTATCACCCACCACTACCCATTCCGGCCCAATGGCGGCGTTGTCGCCATAGTCa                                                                                                                                                                                                       >  4:450010/1‑275 (MQ=255)
                                                                                        gcCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGAGCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTg                                                                                                                                                                                   <  2:445587/275‑1 (MQ=255)
                                                                                                                           ttGTTTCAAATAGTTTATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAATTCCACGTCCAt                                                                                                                                                  >  2:104642/1‑273 (MQ=255)
                                                                                                                           ttGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCagcagc                                                                                                                                                                            >  2:430010/1‑247 (MQ=255)
                                                                                                                               ttCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGcatcat                                                                                                                                                                                                                                                                           <  7:814131/148‑1 (MQ=255)
                                                                                                                                          gctcatccCCGGATGCTGGAGGGCTGTGTAATGGCCAGGGGTTACGCCGGGGTTGTCCGGGTGTAAGTACGGTAAGCCTTTGACATGGGGTTCATACAGGATGGGGCAGCCCAACGGCGTGCGCGGCGGGGCATCATCTACCCAATAATAGTGATCAACCACCGCTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCATGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAACTCCCCGTCAATTTGCCGCGCGCAAGGat                                                                                                                                 <  4:104641/273‑1 (MQ=255)
                                                                                                                                              atcaCCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTccc                                                                                                                                                                                                                                                                     <  6:674545/139‑1 (MQ=255)
                                                                                                                                                      aTGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATTAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCa                                                                                                                                                                                                                                                                <  7:507460/136‑1 (MQ=255)
                                                                                                                                                      aTGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGcat                                                                                                                                                                                                                                                                              <  8:33886/122‑1 (MQ=255)
                                                                                                                                                      aTGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGcat                                                                                                                                                                                                                                                                              >  7:33886/1‑122 (MQ=255)
                                                                                                                                                      aTGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCa                                                                                                                                                                                                                                                                >  6:656180/1‑136 (MQ=255)
                                                                                                                                                      aTGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCa                                                                                                                                                                                                                                                                <  5:656180/136‑1 (MQ=255)
                                                                                                                                                       tGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAacca                                                                                                                                                                                                                                                   <  7:886387/148‑1 (MQ=255)
                                                                                                                                                                  tttATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACt                                                                                                                                                                                                                                              <  6:1049039/142‑1 (MQ=255)
                                                                                                                                                                  tttATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACt                                                                                                                                                                                                                                              >  5:1049039/1‑142 (MQ=255)
                                                                                                                                                                  tttATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCAt                                                                                                                                                                                                                                        >  7:1130409/1‑148 (MQ=255)
                                                                                                                                                                   ttATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGa                                                                                                                                                                                                                                                          <  6:1041439/129‑1 (MQ=255)
                                                                                                                                                                   ttATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGa                                                                                                                                                                                                                                                          >  5:1041439/1‑129 (MQ=255)
                                                                                                                                                                   ttATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAacc                                                                                                                                                                                                                                                    >  6:41519/1‑135 (MQ=255)
                                                                                                                                                                   ttATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAacc                                                                                                                                                                                                                                                    <  5:41519/135‑1 (MQ=255)
                                                                                                                                                                       aaGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCgg                                                                                                                                                                                                                                   >  5:672525/1‑148 (MQ=255)
                                                                                                                                                                            ccACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAACTCCCCGTCAATTTGCCGCGCGCAAGGATCAATAAACAACTTCGCCGGGTGAAAGCGATGccc                                                                                               >  1:12553/1‑275 (MQ=255)
                                                                                                                                                                             cACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAAt                                                                                                                                                                                                                             >  7:1122146/1‑148 (MQ=255)
                                                                                                                                                                               cGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGcat                                                                                                                                                                                                                                                                              <  6:584261/97‑1 (MQ=255)
                                                                                                                                                                               cGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGcat                                                                                                                                                                                                                                                                              >  5:584261/1‑97 (MQ=255)
                                                                                                                                                                                 gATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATggcg                                                                                                                                                                                                                         >  5:468160/1‑148 (MQ=255)
                                                                                                                                                                                     tcGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAACTCCCCGTCAATTTGCCGCGCGCAAGGATCAATCAACAACTTCGCCGGGTTAAAGCGATGCCCCTCGGCggg                                                                                      <  2:23192/275‑1 (MQ=255)
                                                                                                                                                                                      cGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGtt                                                                                                                                                                                                                    >  5:881603/1‑148 (MQ=255)
                                                                                                                                                                                             gATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTc                                                                                                                                                                                                                                                                 >  6:829017/1‑96 (MQ=255)
                                                                                                                                                                                             gATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGa                                                                                                                                                                                                             >  8:456157/1‑148 (MQ=255)
                                                                                                                                                                                              ccgccattgcgccgaaatgcgtagtggtggttgatcactatgactgggaagatgaTGCCCCACGGCGTGCGCGGCGGGGcat                                                                                                                                                                                                                                                                              <  7:327488‑M1/27‑1 (MQ=255)
                                                                                                                                                                                              ccgccattgcgccgaaatgcgtagtggtggttgatcactatgactgggaagatgaTGCCCCACGGCGTGCGCGGCGGGGcat                                                                                                                                                                                                                                                                              >  8:327488‑M1/56‑82 (MQ=255)
                                                                                                                                                                                                  ccGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCa                                                                                                                                                                                                                               <  5:796549/125‑1 (MQ=255)
                                                                                                                                                                                                  ccGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCa                                                                                                                                                                                                                               >  5:996546/1‑125 (MQ=255)
                                                                                                                                                                                                  ccGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCa                                                                                                                                                                                                                               <  6:996546/125‑1 (MQ=255)
                                                                                                                                                                                                  ccGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTc                                                                                                                                                                                                        <  7:456157/148‑1 (MQ=255)
                                                                                                                                                                                                   cGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAACTCCCCGTCAATTTGCCGCGCGCAAGGATCAATCAACAACTTCGCCGGGTTAAAGCGATGCCCCTCGGCGGGTTGCCAGGGGCCAt                                                                        >  2:491497/1‑275 (MQ=255)
                                                                                                                                                                                                         cAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCa                                                                                                                                                                                                 <  6:881603/148‑1 (MQ=255)
                                                                                                                                                                                                           aGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGcatcat                                                                                                                                                                                                                                                                           <  8:122650/72‑1 (MQ=255)
                                                                                                                                                                                                           aGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGcatcat                                                                                                                                                                                                                                                                           >  7:122650/1‑72 (MQ=255)
                                                                                                                                                                                                           aGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCAtt                                                                                                                                                                                               >  7:273229/1‑148 (MQ=255)
                                                                                                                                                                                                           aGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTTCAGCAGCGGGTTATCTTTAAATTCCCCGTCAATTGGCCGAGCGCAAGGATCAATCAACAACTTCGCCGGGTTAAAGCGATGCCCATCGGCGGGGTGCCAGGGGCCAAGAAagcgc                                                                >  4:378653/1‑274 (MQ=255)
                                                                                                                                                                                                              aCGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCAt                                                                                                                                                                                                                                                               >  5:689632/1‑81 (MQ=255)
                                                                                                                                                                                                              aCGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCAt                                                                                                                                                                                                                                                               <  6:689632/81‑1 (MQ=255)
                                                                                                                                                                                                                 ttAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTg                                                                                                                                                                                                                                                           >  7:292836/1‑82 (MQ=255)
                                                                                                                                                                                                                   aaTCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCgg                                                                                                                                                                                       <  8:1122146/148‑1 (MQ=255)
                                                                                                                                                                                                                               tGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAAt                                                                                                                                                                                                                             <  6:248671/98‑1 (MQ=255)
                                                                                                                                                                                                                                gggCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGt                                                                                                                                                                                                                     <  6:829062/105‑1 (MQ=255)
                                                                                                                                                                                                                                gggCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGt                                                                                                                                                                                                                     >  5:829062/1‑105 (MQ=255)
                                                                                                                                                                                                                                gggCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCgg                                                                                                                                                                          <  8:910605/148‑1 (MQ=255)
                                                                                                                                                                                                                                gggCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCgg                                                                                                                                                                          <  8:273229/148‑1 (MQ=255)
                                                                                                                                                                                                                                gggCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCATCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCgg                                                                                                                                                                          >  5:462233/1‑148 (MQ=255)
                                                                                                                                                                                                                                 ggCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGTCGCAATGGCGGCGTTGTCGCGATAGTCCGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAACTCCCCGTCAATTTGCCGTGCGCAAGGATCAATCAACAACTTCGCCGGGTTAAAGCGATGCCCCTCGGCCGGTTGCCGGGGGCCATGCACGCGAAAACCATAACGCAAACCCcggg                                          >  4:318427/1‑274 (MQ=255)
                                                                                                                                                                                                                                  gCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTccc                                                                                                                                                                                                                                                                     <  8:521329/55‑1 (MQ=255)
                                                                                                                                                                                                                                     tCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCa                                                                                                                                                                                                 <  8:320584/120‑1 (MQ=255)
                                                                                                                                                                                                                                        tAAATGATGGTGCTGCCCCCCGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAACTCCCCGTCAATTTGCCGCGCGCAAGGATCAATCAACAACTTCGCCGGGTTAAAGCGATGCCCCTCGGCGGGTTGCCAGGGGCCATGAACGCGATAACCATAACGCAAACCCGGGCGCGCATc                                   <  2:312031/275‑1 (MQ=255)
                                                                                                                                                                                                                                         aaaTGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAAt                                                                                                                                                                                                                             >  8:736017/1‑88 (MQ=255)
                                                                                                                                                                                                                                         aaaTGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAAt                                                                                                                                                                                                                             <  7:736017/88‑1 (MQ=255)
                                                                                                                                                                                                                                          aaTGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGtt                                                                                                                                                                                                   >  6:28977/1‑113 (MQ=255)
                                                                                                                                                                                                                                          aaTGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGtt                                                                                                                                                                                                   <  5:28977/113‑1 (MQ=255)
                                                                                                                                                                                                                                               tgGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCATCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAACTc                                                                                                                                                           <  6:462233/148‑1 (MQ=255)
                                                                                                                                                                                                                                                ggTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGCTATCTTTAAACTCCCCGTCAATTTGCCGCGCGCAAGGATCAATCAACAACTTCGCCGGGTTAAAGAGATGCCCCTCGGCGGGTTGCCAGGGGCCATGAACGCGATAACCATAACGCAAACCCGGGCGCGCATCCGGCAGAt                           >  2:112102/1‑275 (MQ=255)
                                                                                                                                                                                                                                                  tgctgcCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGCCAGGTTCATTATGACAGGCGTGCAGCAGCGGGTTATCTTTACACTCCCCGTCAATTTGCCGACCGCAAGGACAAATCCACAACTTCGCCGTGTTAAAGCGATGCCCCTCGGCCGGCTGCCTCGGGCCCTGACCCCAGTAACCCTTACACCAACGCGCGCGCCCAcccctcaccac                          >  4:531602/1‑266 (MQ=255)
                                                                                                                                                                                                                                                       gccccgccgcgcacgccgtggggcaTCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATggcgg                                                                                                                                                                                                                        >  6:72905‑M2/26‑80 (MQ=255)
                                                                                                                                                                                                                                                       gccccgccgcgcacgccgtggggcaTCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATggcgg                                                                                                                                                                                                                        <  5:72905‑M2/55‑1 (MQ=255)
                                                                                                                                                                                                                                                       CCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAACTCCCCGTCAAtt                                                                                                                                                 <  2:306585‑M1/150‑1 (MQ=255)
                                                                                                                                                                                                                                                        ccccgccgcgcacgccgtggggcaTCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAgg                                                                                                                                                                                                     >  6:15039‑M2/25‑98 (MQ=255)
                                                                                                                                                                                                                                                        ccccgccgcgcacgccgtggggcaTCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAgg                                                                                                                                                                                                     <  5:15039‑M2/74‑1 (MQ=255)
                                                                                                                                                                                                                                                         cccgccgcgcacgccgtggggcaTCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTc                                                                                                                                                                                                  <  7:960349‑M2/77‑1 (MQ=255)
                                                                                                                                                                                                                                                         CCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCa                                                                                                                                                                                                 >  8:1136252‑M1/1‑100 (MQ=255)
                                                                                                                                                                                                                                                          CACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTg                                                                                                                                                                                                                   <  5:176710‑M1/81‑1 (MQ=255)
                                                                                                                                                                                                                                                          CACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCagcagc                                                                                                                                                                            >  8:136272‑M1/1‑120 (MQ=255)
                                                                                                                                                                                                                                                          CACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCagcagc                                                                                                                                                                            <  7:136272‑M1/120‑1 (MQ=255)
                                                                                                                                                                                                                                                           aCGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCttt                                                                                                                                                                 >  5:662161/1‑130 (MQ=255)
                                                                                                                                                                                                                                                           aCGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCttt                                                                                                                                                                 <  6:662161/130‑1 (MQ=255)
                                                                                                                                                                                                                                                           aCGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAACTCCCCGTCAATTTGcc                                                                                                                                             <  4:306584/150‑1 (MQ=255)
                                                                                                                                                                                                                                                            cGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAACTCCCCGTCAATTTGCCGCGCGCAAGGATCAATCAACAACTTCGCCGGGTTAAAGCGATGCCCCTCGGCGGGTTGCCAGGGGCCATGAACGCGATAACCATAACGCAAACCCGGGCGCGCATCCGGCAGATAACCGTGCCaa                >  2:281228/1‑274 (MQ=255)
                                                                                                                                                                                                                                                                 tGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAACTCCCCGTCAATTTGCCGCGCGCAAGGATCAATCAACAACTTCGCCGGGTTAAAGCGATGCCCCTCGGCGGGTTGCCAGGGGCCATGAACGCGATAACCATAACGCAAACCCGGGCGCGCATCCGGCAGATAACCGTGCCAAATggc           >  2:358552/1‑272 (MQ=255)
                                                                                                                                                                                                                                                                  gcgcGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTACCTTTAAACTCCCCGTCAATTTGCCGCGCGCAAGGATCAATCAACAACTTCGCCGGGTTAAAGCGATGCCCCTCGGCGGGTTGCCAGGGGCCATGAACGAGATAACCAAAACGAAAACCCGGGCCCGCATCCGGCAGATAACCGTGCCAAATGtag          >  4:232961/1‑272 (MQ=255)
                                                                                                                                                                                                                                                                            ggcaTCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAACTCCCCGTCAAt                                                                                                                                                  >  6:573739‑M2/5‑129 (MQ=255)
                                                                                                                                                                                                                                                                               aTCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCa                                                                                                                                                                                                       <  7:600651‑M2/72‑1 (MQ=255)
                                                                                                                                                                                                                                                                               aTCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCa                                                                                                                                                                                                       >  8:600651‑M2/2‑73 (MQ=255)
                                                                                                                                                                                                                                                                                tcatcTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGa                                                                                                                                                                                           <  5:784555/84‑1 (MQ=255)
                                                                                                                                                                                                                                                                                tcatcTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGa                                                                                                                                                                                           >  6:784555/1‑84 (MQ=255)
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                            
CGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCGCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAATGATGGTGCTGCCCCACGGCGTGCGCGGCGGGGCATCATCTTCCCAGTCATAGTGATCAACCACCACTACGCATTTCGGCGCAATGGCGGCGTTGTCGCGATAGTCAGGTTCATTATGACCGGCGTGCAGCAGCGGGTTATCTTTAAACTCCCCGTCAATTTGCCGCGCGCAAGGATCAATCAACAACTTCGCCGGGTTAAAGCGATGCCCCTCGGCGGGTTGCCAGGGGCCATGAACGCGATAACCATAACGCAAACCCGGGCGCGCATCCGGCAGATAACCGTGCCAAATGTCGCCACTGTG  >  NC_000913/3570627‑3571166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.