| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,423,383 | A→G | 8.3% | intergenic (+189/+40) | yhdZ → / ← rrfF | putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,423,383 | 0 | A | G | 8.3% | 233.2 / 8.9 | 81 | intergenic (+189/+40) | yhdZ/rrfF | putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon |
| Reads supporting (aligned to +/- strand): ref base A (33/38); new base G (3/4); total (38/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.24e-01 | |||||||||||
AAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGC > NC_000913/3423118‑3423655 | aaGCTGCACCTTATGAAGTTTTTTCGCATCTTAAATTAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGccc < 4:265144/274‑1 (MQ=255) gatgaATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCCCCACCCTCCGGGCCGTTCGTCCCCAACGTTCAAATCCGCCCCCGGCGGTTTTTGCCTCCTCGGGAGACAGTTCACCGAAAACCCCCAAACAAAACACAAACACCAGTCCTCCgcac > 4:218951/1‑272 (MQ=255) tgaATTTTTTGCGCAGCCTAAATCAGAGCGGACGAGGGCATTTTTAACGCAGGTAATCCATTAATTGAAGGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTg < 1:39776/274‑1 (MQ=255) gcgcATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGtt < 2:77173/275‑1 (MQ=255) agcttcagAGGGTATTTTTATCGCAGGTAATCCATTAATTTAATGTTAGTTCGAAAAGCAAAAAGGCACTCCTGTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCTTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTgg < 4:525220/267‑1 (MQ=255) agCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGGTTTGTCCTACTCGGGAGAGTGTTCACCGCCACACCCACGATAAAACCAAAGGCCCAGTCTTCCCACCGCGCCTTTTTTTTTTTTTGATTTCTgg > 4:108286/1‑274 (MQ=21) agCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTgg < 2:471148/274‑1 (MQ=255) agCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTgg < 2:126362/274‑1 (MQ=255) agCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTATTCCGCCTGAGCCTTTTGTTTTTTTTGTTGTcgtg > 1:151157/1‑271 (MQ=255) agCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGACGGGCGTCCTGCCCCCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCCGGAGAGCGTTCACCGACAAACAACAGAAAAAACAAAAGGCCCAGTCTTTCGACCAAACCTTTTGTTTTATTTGATACCTGGc > 1:7816/1‑275 (MQ=18) gCATATTTTTCGCAGTAAATCCAGTAATTGAATGTAAATACGAACAGCAAAAAGGCCGTCCGTGGGAGTGGCTGTTCGTGTGAGTTGACAGCTGGAATTTAATGGGGGCCTTCCTGCCCGCCACGCTCCGGGCCGTTGCTTCGCGACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGGGAGTGTTCACCGACAAACAACGGATAAAACAAAAGGCGCAGTCTTCCGACTGAGCCTTGTGTTTTATTTGATGTCTGGCAGTTCCCTAcc < 4:163431/275‑2 (MQ=14) tATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACt < 2:107979/229‑1 (MQ=255) gggaaTGCATTAAGTTAGTGGTAGGTCGAAAAGGAAAAAGGCTATCCTTTAGTATGGCTGTTCGCTTGATTTGATGGCTGGCAGTTTATGGGTGGCGTCCTGACAGCCACCCGCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACAGGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGGCTGCCGACTGGGCGTTTTGTTTGATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGga < 4:97154/270‑1 (MQ=14) ttAATTGAATGATCGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTTGTTCGCAACGTTCAAATACGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCAACGACACACAATAGATACAACAAAACGCCCATTCTTTCGACTGAGCCTATTGGTTCATTTTATGTCTGGCACTGCACTACTCTCTCC‑T‑GAGGACAcccccacc > 4:408045/1‑270 (MQ=17) aTGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCCGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCg < 2:188806/274‑1 (MQ=255) aTGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTTCCCGCCACCCCTCGGGCCGTTACTTCCCAACGCTACAATCCCCCCCCGGCGGATTTGTCCTACTCGGGCGTGTGTTCGCCGACACACCACCGCTACAACCAAAGGCACAGTTTTCCGACTGAGCCTTTTGTTTTATTTTAACTACGGCAGTTACCTACTCCCGCA‑T‑GGAGGGACCCCACACtccagacc > 4:63378/1‑267 (MQ=255) tGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGAAAAAAAAAAAAGACCAGTCTTCCGACTGAGCCTTTGTTTTTTTTTGATGTCTGTCAAGTCCCTACTCCCGCG‑T‑TGGGAGAGCCCACACTAcccaccgc > 4:479560/1‑269 (MQ=17) cGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTTCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAAAAAACGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTACCTACTATCGCA‑T‑GGGGAAACCCCACACTGCCCTCCGCGCTACg > 1:159385/1‑273 (MQ=255) ttaggttGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGTGGGGCGTCCTGCCCGCCGCCCTCCGGGCCGTTGCTTCGCAACGTTCAAAGCCGCTCCCGGCGGATTTGTACTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGc < 1:7741/267‑1 (MQ=255) ggCCTTTCGCATGATTGTATGTCTGGCAGGTGATGGGGGGCGTCCTGCCAGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCGACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGt < 2:408046/273‑1 (MQ=255) gCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTccc > 2:200573/1‑201 (MQ=255) cTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGt < 2:54884/275‑1 (MQ=255) ttCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTAct < 4:200572/201‑1 (MQ=255) cGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACCAACAACAGATAAAACAAAAGGCCCAGTCTTCCGCCTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCC‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTggg > 2:29207/1‑274 (MQ=255) tGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGGTTTGTCCTACTCGGGGGAGTGTTCACCAACAAACAACCGAAAAAACAAAATGCCCAGTCTTCCCCCTGAGCCTTTTGTTTTTTTTGATGTCTGGCAATTCCCTACTCTCCCATT‑GGGGAACCCCCAC‑CCACCCTCCGCGCTACGGCCTTTCACCTTTGCGTTCGGCATGGTGTCACGTTGGacccccccccctct > 4:418599/1‑264 (MQ=11) tGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGTCGTTTCACTTCTGAGTTCTGCATGGGGTCCGGTGGGACCACCGCGCTCCTgcc > 1:10440/1‑275 (MQ=255) tGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCCCTTCTGAGTTCGGCATGGGGTCAGGTGGGACCCCCGCGCTACTgcc > 1:65649/1‑275 (MQ=37) tGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTgcc > 2:423034/1‑275 (MQ=37) gCAGTTGATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGGTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTgccgc < 1:100479/275‑1 (MQ=37) agtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccagacatcaaATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCttt > 7:47975‑M1/113‑148 (MQ=255) gcgggcgTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAAtt < 2:479561/275‑1 (MQ=38) cgggctCCCCGCCCGCCCCCCGCCGGGCNNNTGCTTGGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACCCGGGCGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAAtt < 3:151157/274‑1 (MQ=255) cccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccagacttcaaATAAAACAAAAGGCCCAGTCTTCCGACTGAGcc > 8:1038098‑M1/99‑131 (MQ=255) cccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccagacatcaaCTAAAACAAAAGGCCCAGTCTTCCGACTGAGcc < 7:1038098‑M1/33‑1 (MQ=255) gCCCGCCACCCTCCGGGCCGTTGCTTCGCAACATTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCCCGCA‑T‑GGGGAGACCCCACCCTACCATCGGCCCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCCGCGGCCTCCGGCCGCCCGGCAACTTCTTTTTTatt > 4:330466/1‑272 (MQ=11) cGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTc > 7:661421/1‑110 (MQ=40) cGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑TGGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTg > 1:71758/1‑275 (MQ=255) cGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCAGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTc < 8:661421/110‑1 (MQ=255) catgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctcctcatgcgagagtagggaactgccaggcatcaaATAAAACGAAAGGCCCAGTCTTCCGACTGa > 5:491071‑M1/87‑116 (MQ=255) catgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtctcctcatgcgagagtagggaactgccaggcatcaaATAAAACGAAAGGCCCAGTCTTCCGACTGa < 6:491071‑M1/30‑1 (MQ=255) cTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAg > 7:71976/1‑114 (MQ=40) cTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAg < 8:71976/114‑1 (MQ=40) gggCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGa < 8:713140/105‑1 (MQ=255) gggCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGa > 7:713140/1‑105 (MQ=40) gggCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGTATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAAc < 2:108287/275‑1 (MQ=255) ccGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTa < 4:423033/275‑1 (MQ=255) tttggtccgaaaCGTTACAATCNNGCCCCNGCGTGTTGGTCCACCCCGGGAGGGTTTCAACCGACAAACAACAGATAAAACCAAAGGCCCTGTCTTCCGACTGGGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑TGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTaaa < 3:10440/265‑1 (MQ=17) gaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccagacatcaaATAAAACAAAAGGCCCAGTCTTCCGACTg > 7:881736‑M1/74‑102 (MQ=255) gaagtgaaacgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccagacatcaaATAAAACAAAAGGCCCAGTCTTCCGACTg < 8:881736‑M1/29‑1 (MQ=255) gttgtggaaCGTTCAAATCCGATCCCGGCGGCTTTGTCCTTGTCGGGGGAGTGTTCACCGACAAACAACAGATAAAACGAAAGACGCGGTCTTCTGTGTGAGCCGTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGAA‑T‑GGGGAGAACCAACACTACCATCGGCGTTACGGCGGTTCACTTCTGAGTTCGGCGTGGGGTCAGGTGGGACCACCGTGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAg < 4:1242/268‑1 (MQ=255) tCGCAACGTTACAATCCGCTCCCCGCGGATTTGTCCTACTCGGGCGAGGGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTTGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCGGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAgtgg < 2:279283/275‑1 (MQ=255) cgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCt < 6:358880‑M1/34‑1 (MQ=255) cgccgtagcgccgatggtagtgtggggtctccccatgcgagagtagggaactgccaggcatcaaATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCt > 5:358880‑M1/65‑98 (MQ=255) cGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTg < 2:310494/274‑1 (MQ=255) ttCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTg > 2:142275/1‑272 (MQ=255) tCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGccc < 7:629843/75‑1 (MQ=255) tCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGccc > 8:629843/1‑75 (MQ=255) tCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTTGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAACAGTGGTGCTGATAc > 2:482259/1‑275 (MQ=255) cAAATCCGCTCCCGGCGGATTTGTCCTACGCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATAcc < 2:242948/275‑1 (MQ=255) aaTCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCt > 5:691611/1‑90 (MQ=255) aaTCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCt > 5:791787/1‑90 (MQ=255) aaTCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCt < 6:691611/90‑1 (MQ=255) aaTCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCt < 6:791787/90‑1 (MQ=255) cccGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTg > 8:149945/1‑86 (MQ=255) cccGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTg < 7:149945/86‑1 (MQ=255) cctcatgcgagagtagggaactgccaggcatcaaATAAAACGAAAGGCCCAGTCTTCCGACTGAGcc > 7:926911‑M1/35‑67 (MQ=255) cctcatgcgagagtagggaactgccaggcatcaaATAAAACGAAAGGCCCAGTCTTCCGACTGAGcc < 8:926911‑M1/33‑1 (MQ=255) cTACCCGGGTGAGTGTTCACCGCCAAACANNAGATAAAACAAAAGGCCCTGTCTTCCGACGNGGCCTTTTGTTTTATTTGCTGTCTGGCAGTTCCCTACTCTCGCA‑TGGGGGAGACCCCACACTACCATCGGCGCTNCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCAcc < 3:71758/275‑1 (MQ=21) cTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCt > 2:152894/1‑273 (MQ=255) cGGGAGGGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTAc < 2:538484/274‑1 (MQ=255) ggAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGa > 7:474855/1‑52 (MQ=255) ggAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGa < 8:474855/52‑1 (MQ=255) ggAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCa < 2:345908/274‑1 (MQ=255) gagaGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAg > 4:570919/1‑83 (MQ=255) gtgtTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTcc < 2:570920/83‑1 (MQ=255) tgtTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTgc < 2:314398/275‑1 (MQ=255) acaaacaaCAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGACTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCa > 4:451729/1‑275 (MQ=255) aacaGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAg < 4:142274/275‑1 (MQ=255) aCAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGTCGCTACGGCGTTTCACTTCTGAGTTAGGCATGGGGTCAGGTCAGACCAGCGCGCCACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTCATCTTAAAAGTCGTGCTGATACACAGTGTCGCACTGGGGAACTACCCCTTACCAAGGGTGGCCCCTCCCAACCACGCCatattcac > 4:33032/1‑271 (MQ=18) aCAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAAc > 4:125905/1‑261 (MQ=255) aCAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCCCACCCTTACCAAGGGTCCGCCCTACCAACTGAGCCATATCAGc > 4:507444/1‑275 (MQ=255) | AAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAATTGAATGTTAGTTCGAAAAGCAAAAAGGCCATCCTTTCGGATGGCCTTTCGCTTGATTTGATGTCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGTGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGTCTTCCGACTGAGCCTTTTGTTTTATTTGATGTCTGGCAGTTCCCTACTCTCGCA‑T‑GGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGC > NC_000913/3423118‑3423655 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |