| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,563,547 | C→A | 6.9% | intergenic (+29/+240) | glpD → / ← yzgL | sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding/pseudogene, periplasmic solute binding protein homology |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,563,547 | 0 | C | A | 6.9% | 509.6 / 22.4 | 145 | intergenic (+29/+240) | glpD/yzgL | sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding/pseudogene, periplasmic solute binding protein homology |
| Reads supporting (aligned to +/- strand): ref base C (57/78); new base A (5/5); total (62/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.45e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.31e-02 | |||||||||||
Only 100 of 148 total aligned reads displayed.
ACGGCAGCAACAGCGAGCTGCTGCTCGGCAATGCGGGAACGGTAAGCGATCTCGGGGAAGATTTCGGTCATGAGTTCTACGAAGCGGAGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAG > NC_000913/3563274‑3563807 | gAGCTGCTGCTCGGCAATGCGGGAACGGTAAGCGATCTCGGGGAAGATTTCGGTCATGAGTTCTACGAAGCGGAGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACANAACAAGGCATGTGGCTAAATCCGGATCAACAATCTCGTGTGAGTCAGTGGCGGGGTGAGTATACGCAGCATAGGNGATAGATGGAGTCGGAAAGTAAGGTAGTGGNNAT‑AGGTAAGATAGCAATCTGGGCTGAGAc > 3:58355/1‑275 (MQ=255) gCGGGAACGGTAAGCGATCTCGGGGAAGATTTCGGTCATGAGTTCTACGAAGCGGAGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACaaaa < 2:223577/274‑1 (MQ=255) gCGGGAACGGTAAGCGATCTCGGGGAAGATTTCGGTCATGAGTTCTACGAAGCGGAGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACaaaa < 4:342739/274‑1 (MQ=255) aaGCGATCTCGGGGAAGATTTCGGTCATGAGTTCTACGAAGCGGAGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATgcg < 2:467941/275‑1 (MQ=255) aaGCGATCTCGGGGAAGATTTCGGTCATGAGTTCTACGAAGCGGAGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATgcg < 2:367630/275‑1 (MQ=255) aaGCGATCTCGGAGAAGATTTCGGTCATGAGTTCTACGAAGCGGAGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATgcg < 2:265906/275‑1 (MQ=255) gggAAGATTTCGGGAATGAGTTGTTCGAGGCGGGGTTGAAATGCCTGGTGGCTACCGAAGGGGTTCGGTGCGCCGGCGACGCCCTGGGGGGTCGCAAAAAACAAGGCATGTGGCTAAATGCGGATCAACAAGCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTAt < 4:287652/274‑1 (MQ=255) ggAAGATTTCGGTCATGAGTTCTACGAAGCGGAGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTAt < 1:44450/273‑1 (MQ=255) tCGGTCATTAGTTCTACGAAGCGGAGCTGAAATACCTGGTGGATAACGCATGGTTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTAc < 1:132446/274‑1 (MQ=255) tCGGTACTGAGTTCGCCAAAGCGGAGCTGAAATACCTGGGGGATAACGAATGGGTCCGCCGAGCCGACGACGCCCTGGGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCGCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTAc < 4:517020/274‑1 (MQ=255) tcgtggggtacaCGGAGCGGAGGTGAAATAGCGGGTGGGTAACGAAGGGGACCGCCGCGCCGGCGACGCCCTGTGGCGTCGCAACAAACAAGGCATGTGGCTAAATGCGGACAAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTAGACGCAGCAGAGGTTATCGCTGGCGTCGTAAAGTAACGTA‑AGGTGATCAGGTCAGATTGCAAGCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGt < 4:129371/264‑1 (MQ=255) caggAGTTTTACGAAGCGGGGGCGAAAGGCATGGTGGTTCACGAATGGGTCCGGCGGGCCGAGGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGGGTCAGTGGCTGGTGGAGTAGACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGt < 4:420216/271‑1 (MQ=255) gAGTTCTACGAAGCGGAGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTTAGTGGCTGGTGGAGTATACGTATCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTTATTAGGTCAGATTTCACTCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTAt > 1:11131/1‑275 (MQ=255) tCTAGGAAGCGGACCTGAAATACCTGGTGGGCGACGGATGGGTCCGCCGCGCCGACGACGCCCTGTGGGGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGGGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCa < 4:370800/274‑1 (MQ=255) tCTACGAAGCGGGGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCTGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCa < 2:2415/274‑1 (MQ=255) cGAAGCGGAGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAatata < 2:100880/275‑1 (MQ=255) aGCGGAGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATAtt < 2:175490/274‑1 (MQ=255) tGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCa < 2:83219/275‑1 (MQ=255) gAATGGGTCCGCCGTCCCGACGCCGCCCTGTGGCCTCGCACAACACAAGGCATGTGGCTAAATGCGTATAGACAATCTCGTGTGAGTCGGTGGCTGGTGGAGTATACGCAGCAGAGGTTTTCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATaa < 2:510914/275‑1 (MQ=38) agaggggTCCGCCGGGCCCTAGACGCCCTGGGGGGTCGCGAAAAACAGGGCATGTGGGTAAATGCGGATTAACAATTNGGGGTGAGTCAGTGGCTGGTGGAGTATACGCAGCGGGGGTTATCGCTGGAGTCGGAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATaa < 3:124568/271‑1 (MQ=37) cccnnggcgccgACGAGGCCTGGTGGCGTCGCACAAAACAAGGGATGTGGCTANATGCGGATCAACAGTCTCGTGTGGGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGAGGACAAACACAAAACTGCCTGATGCGCTACg < 4:542854/200‑1 (MQ=255) ccTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCt > 7:1110824/1‑148 (MQ=255) cGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACtgatg < 8:1110824/148‑1 (MQ=255) cacaAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGAc > 5:34874/1‑148 (MQ=255) caAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATc > 7:128038/1‑128 (MQ=255) caAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATc < 8:128038/128‑1 (MQ=255) caAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTg > 7:119256/1‑130 (MQ=255) caAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTg < 8:119256/130‑1 (MQ=255) caAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACtg < 7:906686/141‑1 (MQ=255) aCAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACtga < 6:15833/138‑1 (MQ=255) aTGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATgcgc > 6:536833/1‑148 (MQ=255) gATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAAtt > 2:72816/1‑275 (MQ=255) tCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCtt > 6:33956/1‑148 (MQ=255) acaaTCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAAt > 7:528077/1‑96 (MQ=255) acaaTCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAAt < 8:528077/96‑1 (MQ=255) acaaTCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTgg < 5:351168/100‑1 (MQ=255) acaaTCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTgg > 6:351168/1‑100 (MQ=255) acaaTCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGa > 7:249933/1‑133 (MQ=255) acaaTCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGa < 8:249933/133‑1 (MQ=255) aTCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTc < 6:34165/90‑1 (MQ=255) tgtgAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGNTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACNTTCACGTCGAATCCGGCATGAACAAAGAGCACTTTGTTAAAAATCNANACTACTTTTTAATTTAAGGAAATaacac > 3:33493/1‑271 (MQ=255) tgtgAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCg > 2:43472/1‑274 (MQ=255) gAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTgg < 5:33956/148‑1 (MQ=255) aGTCAGTGGCTGCGGGAGTATAAGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATAAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAg < 2:13590/275‑1 (MQ=255) gTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCt > 6:143794/1‑140 (MQ=255) gTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCt < 5:143794/140‑1 (MQ=255) tCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAac > 5:560566/1‑104 (MQ=255) tCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCCCATCCGGCCTTCACAAAGCTCACTTTGTCAAAAATCTAACATACTTTTTAATTCCGGGAAATACCGCAAAGc > 4:366545/1‑274 (MQ=255) cAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAgg < 8:190559/135‑1 (MQ=255) cAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAgg > 7:190559/1‑135 (MQ=255) cAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTa > 7:142344/1‑148 (MQ=255) gTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGc > 4:467860/1‑134 (MQ=255) tGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTgag < 7:197163/87‑1 (MQ=255) tGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTgag > 8:197163/1‑87 (MQ=255) gCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTa > 5:611114/1‑143 (MQ=255) gCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTa < 6:611114/143‑1 (MQ=255) ggtggAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTCTCAGGCCTACGTGGTTNATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATTAACAAATCGNACTTTGTCCAACAACCAACCTACTTTTTAANNTATGGAATTTCCCCACACCCCaaccac > 3:69779/1‑268 (MQ=255) tggAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGcc > 8:455430/1‑104 (MQ=255) tggAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGcc < 7:455430/104‑1 (MQ=255) gTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATAcc < 1:58355/274‑1 (MQ=255) tataCGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCaa < 6:929044/64‑1 (MQ=255) tataCGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCaa > 5:929044/1‑64 (MQ=255) cGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCa > 7:399656/1‑133 (MQ=255) cGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCa < 8:399656/133‑1 (MQ=255) gcagAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGCCAGATTGAAATCTga > 8:897701/1‑60 (MQ=37) gcagAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGCCAGATTGAAATCTga < 7:897701/61‑2 (MQ=37) gagGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAAtt > 6:609220/1‑138 (MQ=255) gagGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAAtt < 5:609220/138‑1 (MQ=255) agGTTATCGCTGGCGTCGGAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCtt < 8:142344/148‑1 (MQ=255) gTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACCAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACt > 2:21420/1‑274 (MQ=255) tATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTa < 5:292666/117‑1 (MQ=255) tATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAg < 4:43471/275‑1 (MQ=255) aTCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAACCACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAg > 2:105122/1‑274 (MQ=255) aTCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTc > 2:470055/1‑168 (MQ=255) tCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGc > 5:517258/1‑148 (MQ=255) cTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCAt < 4:470054/168‑1 (MQ=255) gCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAAtt > 1:18295/1‑125 (MQ=255) gCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCATTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGcc > 2:332909/1‑235 (MQ=255) gtcgtAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAg < 6:517258/148‑1 (MQ=255) cgtAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCa < 3:18295/125‑1 (MQ=255) ttAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCa < 5:1075819/84‑1 (MQ=255) ttAACGTA‑AGGTGATCAGGCCAGATTGAAATCTga > 8:890305/1‑34 (MQ=2) cGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGcc < 8:943220/129‑1 (MQ=255) aGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACaaaa > 4:392424/1‑52 (MQ=255) gTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATAtt < 5:51148/100‑1 (MQ=255) tGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTa > 7:684809/1‑88 (MQ=255) tGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTa < 8:684809/88‑1 (MQ=255) ggtacAGGTCCGATTTCAACCTTGCCTGGGACGGATGACAAACACAAAATGTCCTGATGGCTTACTTTTAGCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAATGCGCACTTTGTCAAAAATCTACCCTACTTTTTAATTTAGGGAATTACCGCAAAGCCAACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGaaaaa < 4:234362/270‑1 (MQ=255) gATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGc < 2:392425/52‑1 (MQ=255) aTCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGcc > 1:135080/1‑212 (MQ=255) aTCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAg > 1:66563/1‑275 (MQ=255) tCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAgg < 6:76229/72‑1 (MQ=255) tCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAgg > 5:76229/1‑72 (MQ=255) aGGCCAGATTGAAATCTGACCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCa < 7:532720/87‑1 (MQ=18) ggTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCa < 7:977423/86‑1 (MQ=255) ggTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCa > 8:977423/1‑86 (MQ=255) gTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCa < 8:634165/101‑1 (MQ=255) tCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACg < 7:999771/58‑1 (MQ=255) cAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGa < 7:806783/48‑1 (MQ=255) cAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGa > 6:454081/1‑48 (MQ=255) | ACGGCAGCAACAGCGAGCTGCTGCTCGGCAATGCGGGAACGGTAAGCGATCTCGGGGAAGATTTCGGTCATGAGTTCTACGAAGCGGAGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAAATTAACGTA‑AGGTGATCAGGTCAGATTTCAATCTGGCCTGAGACTGATGACAAACACAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGTTTATGCAATATATTGAATTTGCATGGTCTTGTAGGCCAGATAAGACGTTCACGTCGCATCCGGCATGAACAAAGCGCACTTTGTCAAAAATCTAACCTACTTTTTAATTCAGGGAATTACCGCAAAGCCCACGCCATCATACCCAACGTAACAAAACTCAGGCACGTTCCCCACTCGCCCCGAGAAAAATAG > NC_000913/3563274‑3563807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |