| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,992,624 | T→G | 100% | L491R (CTG→CGG) | cyaA → | adenylate cyclase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,992,624 | 0 | T | G | 100.0% | 513.6 / NA | 137 | L491R (CTG→CGG) | cyaA | adenylate cyclase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (71/66); total (71/66) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 145 total aligned reads displayed.
TGCGCGTCGCAATAACCTTAGCGTCTCCGCCAGTCCGCAGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTT > NC_000913/3992352‑3992894 | tGCGCGTCGCAATAACCTTAGCGTCTCCGCCAGTCCGCAGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTCTAGTTATAACCGCGCGCCACACATTAAGTCGATCCTCATCCATCCGCCNNNCGAATAAAACCGTTACCTGAATAAACagg > 3:153372/1‑275 (MQ=255) cgcgTCGCAATAACCTTAGCGTCTCCGCCAGTCCGCAGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGCCGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACTGAATCTTACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTTAGGTTGGTATCTGTATAACGCCGCGCCAAATATTGAGGCCGTCTTCAGCCATCACCCGGTGGAATATCACCGTTATCTGTATCAACggggt > 4:323745/1‑273 (MQ=255) cGCAATAACCTTAGCGTCTCCGCCAGTCCGCAGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTTCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCCGCCATCAGCCGCTGGAATATAACCGTTAACTGAATAAACGGGTGGCGTg > 2:19134/1‑275 (MQ=255) tcCGCCAGTCCGCAGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCACCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTTTAACCGCGCGCCCAATATTGAGTCGATCATCAGCCATCAGCCGCCGGAATATAACCTTTACCTGAATAAACGGGTGGCGTTGGCATGGTTTAAcagtc > 1:153181/1‑270 (MQ=255) cAGTCCGCAGGAATGTGGGGTGCTGATCCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGGGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGa < 4:247793/275‑1 (MQ=255) gCAGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTc < 2:176308/273‑1 (MQ=255) ggATATCCGCGTGCGGACGCGTTAGCTGTATGCCGCGTTTGAAGCAGTACCAGGTAAAGTGACGCTGGTAAACCCGCAGAGTTCACCCGATCTCTCGAAACCGAATCTGACCTTTATTGATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCa < 2:377424/275‑1 (MQ=255) atatCGGCGTGCTTACGCGTAAGCGGTATGACGCGTTTGAAGCAGTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCTCCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCAcc < 1:156229/275‑1 (MQ=255) atCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCCCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTTAATAAACGGGTGGCGGTGGCATGGTTTACCGGCCTGCGGACCCCGCcccccc > 4:291558/1‑274 (MQ=255) tAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTcg > 4:228185/1‑250 (MQ=255) gCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCCCCCGTTTGTATATTAAAGGTAAc > 2:277215/1‑274 (MQ=255) cTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCa < 2:228186/250‑1 (MQ=255) tATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCAt > 4:366685/1‑275 (MQ=255) cgTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTTAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTTCTGACCTCCCCCCCCCGTTTGTGTATTAAAGGTAAAGGCAtttgccat > 4:102780/1‑269 (MQ=255) cgTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATGAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGa < 2:418459/274‑1 (MQ=255) gTTTTAAGCAGTACCAGGGAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGAt < 4:238919/274‑1 (MQ=255) gTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGAtt > 2:278926/1‑275 (MQ=255) ttACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCCTCAGCCATCAGCCGCTGGAATAGAACCGTTACCTGAATAAACGGGTGGCCTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTCGATTAAAGGTAACGGCATTGTCGATTGTCCTAAGtt > 4:509739/1‑275 (MQ=255) tACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGtt > 2:39343/1‑274 (MQ=255) tAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGAACACGCGCACCCGTTTGTATATTAAAGGTAAAGGCATTGTGGGTTTGCCTAAGTTGCAGgaga > 4:57834/1‑275 (MQ=255) tGACGCTGGTAAACCCGCATATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATTTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTACAGGTCATGGACCTGTCGATTTGACTAAGTGTGAGGAGCTgga > 4:377071/1‑273 (MQ=255) gCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCCACCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCg > 1:104607/1‑275 (MQ=255) gCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCAAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCg < 4:39342/275‑1 (MQ=255) aaaCCCGCGGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACgtg < 2:57835/274‑1 (MQ=255) cGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCa < 2:102781/274‑1 (MQ=255) cACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGGCACTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCg < 2:211751/275‑1 (MQ=255) aTCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTgcgc > 4:478179/1‑275 (MQ=255) cGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTg < 8:118518/148‑1 (MQ=255) gAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACggg > 8:315716/1‑139 (MQ=255) gACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAAc > 6:489009/1‑148 (MQ=255) ttatttagGTGCTGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGgcg < 1:34321/275‑1 (MQ=255) ttgggccgccGGGCGGGGTTAACCGTTCAGGTTGGTATCGGTGTAACCGGGCGCCAAATATTTAGTCGATCATCAGCCATCAGCCGCTGGAAAATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTa < 4:109038/270‑1 (MQ=255) tgCCGCCGGGCCGGGCTAACCGTTCAGTGTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCTATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGc < 1:122782/275‑1 (MQ=255) gccgggccggGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCa > 7:1106644/1‑121 (MQ=255) ccgggcTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGt > 5:883952/1‑148 (MQ=255) aCCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTg > 6:752448/1‑103 (MQ=255) aCCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTa > 8:701974/1‑114 (MQ=255) ctgTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCctg < 8:424480/119‑1 (MQ=255) ccGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCctg > 7:424480/1‑121 (MQ=255) ttCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGtt < 7:317901/137‑1 (MQ=255) ttCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGtt > 8:317901/1‑137 (MQ=255) tCAGGTTGGTATCTTTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACgggt < 5:336108/92‑1 (MQ=255) tCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACgggt < 7:1020241/92‑1 (MQ=255) tCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCCTTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTgg > 2:315546/1‑274 (MQ=255) cAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTTCAAGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACCCCGAAGGCCCCACACAGCCCGTGTCAGATCCGCCATCTg > 4:480468/1‑272 (MQ=255) ttGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTaa < 7:861529/141‑1 (MQ=255) tATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATg > 8:420255/1‑95 (MQ=255) tATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGtt < 7:1093534/127‑1 (MQ=255) tATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGtt > 8:1093534/1‑127 (MQ=255) tCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACg < 5:1004380/143‑1 (MQ=255) gcTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGtt < 2:49134/273‑1 (MQ=255) cTGTATAACCGCGCGCCAAATGTTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGtt > 5:686476/1‑124 (MQ=255) cTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTaa < 8:1067520/98‑1 (MQ=255) cTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGtt < 6:686476/124‑1 (MQ=255) gTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTCTCGTTAAcc > 1:114826/1‑275 (MQ=255) gTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAAcc < 2:366686/275‑1 (MQ=255) tataACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCctgc > 5:64890/1‑103 (MQ=255) cgcgcgCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAgg < 5:563481/128‑1 (MQ=255) cgcgcCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTTGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCCCCGACACCGAAGGCCGCCTACAGCCCGGTGGAGATCCGCCATCTGGCGGTTCTCGTTAACCTGGAATATg > 4:440227/1‑275 (MQ=255) cgcgcCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGAc < 4:366696/172‑1 (MQ=255) cgcgcCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCCCCATTTCCCGCTGCGCTTCCCTGCACCGACCCCGAAGGCGCCCTACAGCCCGTCTGGCAACCCCCATATGGCGATTATCGTTCACCTGGGACATg > 4:16196/1‑275 (MQ=255) cgcgcCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAatat > 2:333830/1‑274 (MQ=255) cgcCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCCCCGACACCGAAGGCGCTCTACAGCCCGTGTGCGCACCGCCATCTGCCTGTTATCGTTAACCTGAAAAATGa > 1:146291/1‑274 (MQ=255) cgcCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGa > 4:343780/1‑274 (MQ=255) aaaTATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGc < 5:473436/72‑1 (MQ=255) aaaTATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGc > 6:335247/1‑72 (MQ=255) aaaTATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGc > 6:473436/1‑72 (MQ=255) aaaTATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGt > 7:298942/1‑110 (MQ=255) aaTATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCa > 8:1116161/1‑100 (MQ=255) gAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCAc > 2:197485/1‑168 (MQ=255) gTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCt > 2:59037/1‑182 (MQ=255) tCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTcg > 8:761422/1‑87 (MQ=255) tCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTcg < 7:761422/87‑1 (MQ=255) cGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCAtt < 4:197484/168‑1 (MQ=255) atctaccagcatcagccGCGGGAAGATAACCGTTACCGGAATAAGCGGGTGGCTTGGGCATGGTTTAACGGCCTGATAACCTCGCATAACAGTTTGTATATTAAAGGAAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGAAGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGAGACCGAAGGCGCTCTACAGCCCGTGTGGGGTCCGCCATCTGGCGATTATCGTTAACCTGGAAAATGACCCGGCAGCGGCGTTCCg < 4:438264/266‑1 (MQ=255) atcatcAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTAcc < 4:59036/182‑1 (MQ=255) atcatcAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTAGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCg < 2:323746/275‑1 (MQ=255) tcatcaGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATg < 7:632700/61‑1 (MQ=255) tcatcaGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGtt < 8:877495/93‑1 (MQ=255) tcatcaGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGtt > 7:877495/1‑93 (MQ=255) tcatcaGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGc > 8:869429/1‑148 (MQ=255) catcagccaccagcCGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCa < 2:509740/275‑1 (MQ=255) agccatcagccGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGt > 5:894903/1‑58 (MQ=255) agccatcagccGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGt < 6:894903/58‑1 (MQ=255) tcagccGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTACGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACAGACCCAGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGCTTATCGTTAACCTGGAATATGACCCGAACGCGGCGTTCCGCAATCAggtg > 4:104648/1‑274 (MQ=255) cagccGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCg > 6:598004/1‑80 (MQ=255) cagccGCTGGAATATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCg < 5:598004/80‑1 (MQ=255) aaTATAACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTa < 7:383698/108‑1 (MQ=255) ataACCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCt > 7:243512/1‑148 (MQ=255) aaCCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTaa > 5:783481/1‑83 (MQ=255) aaCCGTTACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTaa < 6:783481/83‑1 (MQ=255) ttACCTGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCCTCCGGCGATTATCGTTAACCTGGAATATGACCCGACACCCGGGTTCCGCAAACCGGGGGTTCATTTCGATTTCCGTAAGc > 4:117933/1‑275 (MQ=255) tGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGgag < 6:625505/104‑1 (MQ=255) tGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTa > 5:160602/1‑143 (MQ=255) tGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTa < 6:160602/143‑1 (MQ=255) tGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGc < 8:243512/148‑1 (MQ=255) tGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGc > 7:441314/1‑148 (MQ=255) tGAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGGTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGa < 2:117461/274‑1 (MQ=255) gAATAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGAt < 7:908857/105‑1 (MQ=255) aTAAACGGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTc > 2:8110/1‑275 (MQ=255) | TGCGCGTCGCAATAACCTTAGCGTCTCCGCCAGTCCGCAGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTT > NC_000913/3992352‑3992894 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |