| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1512410 = | 85 (0.910) | 6 (0.070) | 5/192 | NT | 7.7% | coding (757/1146 nt) | ydcS | putative ABC transporter periplasmic binding protein |
| ? | NC_000913 | 1512451 = | 63 (0.700) | coding (798/1146 nt) | ydcS | putative ABC transporter periplasmic binding protein | |||||
CCCAACCGGTAACACCCTCCTTCGGGAAAACGGTAGCAACAGGCTGGCCTTCGGCTTTCAGGGCGTTGGCCTGATAGGGCCAGGCACTGGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1512503‑1512410‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGGATGAACTGGTCATTAACGCCAAAAGTGCAGGGCGATGT > NC_000913/1512451‑1512597 CCCAACCGGTAACACCCTCCTTCGGGAAAACGGTAGCAACAGGCTGGCCTTCGGCTTTCAGGGCGTTGGCCTGATAGGGCCAGGCACTGGA > 1:73109/1‑91CCCAACCGGTAACACCCTCCTTCGGGAAAACGGTAGCAACAGGCTGGCCTTCGGCTTTCAGGGCGTTGGCCTGATAGGGCCAGGCACTGGA < 2:73109/91‑1 CTTTCAGGGCGTTGGCCTGATAGGGCCAGGCACTGGAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGA > 1:706734/1‑76 CTTTCAGGGCGTTGGCCTGATAGGGCCAGGCACTGGAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGA < 2:706734/76‑1 GGCGTTGGCCTGATAGGGCCAGGCACTGGAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGG < 1:786439/142‑1 GGCGTTGGCCTGATAGGGCCAGGCACTGGAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGG > 2:786439/1‑142 GGCGTTGGCCTGATAGGGCCAGGCACTGGAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGC > 3:2736/1‑101 GGCGTTGGCCTGATAGGGCCAGGCACTGGAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGC < 4:2736/101‑1 GCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCC < 1:1004986/92‑1 GCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCC > 2:1004986/1‑92 CCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGGATGAACTGGTCATTAACGCCAAAAGTGCAGGGCGATGT > 2:420964/1‑148 CCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGGATGAACTGGTCATTAACGCCAAAAGTGCAGGGCGATGT > 4:388941/1‑148 CCCAACCGGTAACACCCTCCTTCGGGAAAACGGTAGCAACAGGCTGGCCTTCGGCTTTCAGGGCGTTGGCCTGATAGGGCCAGGCACTGGAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1512503‑1512410‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGGATGAACTGGTCATTAACGCCAAAAGTGCAGGGCGATGT > NC_000913/1512451‑1512597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |