| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1537117 = | 116 (1.240) | 6 (0.070) | 4/186 | NT | 5.6% | coding (193/696 nt) | narW | nitrate reductase 2 (NRZ), delta subunit (assembly subunit) |
| ? | NC_000913 | 1537148 = | 95 (1.090) | coding (162/696 nt) | narW | nitrate reductase 2 (NRZ), delta subunit (assembly subunit) | |||||
CTGTTGTGGGAATGCAAGGAGGACGCGCTGGCGTTGATCCGCCGCGACGCGCCGATGCTTACGGATTTCACCCACAACCTGCTTAACGCGCCGCTGCTGGATAAACAGGCCGAATGGTGCGAAGTGTTTGACCGCGGGCGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1537261‑1537117‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaccaTTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGA > NC_000913/1537148‑1537290 CTGTTGTGGGAATGCAAGGAGGACGCGCTGGCGTTGATCCGCCGCGACGCGCCGATGCTTACGGATTTCACCCACAACCTGCTTAACGCGCCGCTGCTGGATAAACAGGCCGAATGGTGCGAAGTGTTTGACCGCGGGCGC > 1:813706/1‑141CTGTTGTGGGAATGCAAGGAGGACGCGCTGGCGTTGATCCGCCGCGACGCGCCGATGCTTACGGATTTCACCCACAACCTGCTTAACGCGCCGCTGCTGGATAAACAGGCCGAATGGTGCGAAGTGTTTGACCGCGGGCGC < 2:813706/141‑1 GCGAAGTGTTTGACCGCGGGCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTA > 1:274576/1‑82 GCGAAGTGTTTGACCGCGGGCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTA < 2:274576/82‑1 GCGAAGTGTTTGACCGCGGGCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTA > 3:62849/1‑82 GCGAAGTGTTTGACCGCGGGCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTA < 4:62849/82‑1 AAGTGTTTGACCGCGGGCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTG > 1:395857/1‑66 AAGTGTTTGACCGCGGGCGCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTG < 2:395857/66‑1 GCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAAC < 1:819032/142‑1 GCACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAAC > 2:819032/1‑142 CACCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGA < 1:118317/148‑1 CCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCC < 1:372807/110‑1 CCATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCC > 2:372807/1‑110 CATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAAC > 1:587645/1‑114 CATTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAAC < 2:587645/114‑1 CTGTTGTGGGAATGCAAGGAGGACGCGCTGGCGTTGATCCGCCGCGACGCGCCGATGCTTACGGATTTCACCCACAACCTGCTTAACGCGCCGCTGCTGGATAAACAGGCCGAATGGTGCGAAGTGTTTGACCGCGGGCGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1537261‑1537117‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaccaTTCGGCCTGTTTATCCAGCAGCGGCGCGTTAAGCAGGTTGTGGGTGAAATCCGTAAGCATCGGCGCGTCGCGGCGGATCAACGCCAGCGCGTCCTCCTTGCATTCCCACAACAGCTCGTCCGGATACTCCATCAACAGGCCGA > NC_000913/1537148‑1537290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |