| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2505958 | 72 (0.770) | 6 (0.070) | 3/186 | NT | 8.3% | coding (675/1086 nt) | ypdF | Xaa‑Pro aminopeptidase |
| ? | NC_000913 | = 2505986 | 66 (0.760) | coding (647/1086 nt) | ypdF | Xaa‑Pro aminopeptidase | |||||
AATCGCGGAGATTGCTGCGAGCTGTGCCTGCAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2505853‑2505958‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcgc‑T‑GTATCAGGGCTACTGCTCTGATATGACGCGCACCTTGCTGGTGAATGGCGAAGGGGTGAGCGCCGAATCTCACCTGCTGTTTAACGTCTATCAAATTGTCCTGCAGGCACAGCTCGCAGCAATCTCCGCGATTCGCCCCGGCG < NC_000913/2505986‑2505843 AATCGCGGAGATTGCTGCGAGCTGTGCCTGCAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGC‑T‑GTATCAGGGCTACTGCTCTGATATGACGCGCAC > 1:358114/1‑140AATCGCGGAGATTGCTGCGAGCTGTGCCTGCAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGC‑T‑GTATCAGGGCTACTGCTCTGATATGACGCGCAC < 2:358114/140‑1 CAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCG < 3:24817/75‑1 CAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCG > 4:24817/1‑75 TTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGGGCTACTGCTCTGATA < 1:678395/93‑1 TTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGCGTCATATCAGGGCTACTGCTCTGATA > 2:678395/1‑93 TTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGC‑T‑GTATCAGGGCTACTGCTCTGATATGACGCGCAC > 3:54278/1‑101 TTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGC‑T‑GTATCAGGGCTACTGCTCTGATATGACGCGCAC < 4:54278/101‑1 GCGC‑T‑GTATCAGGGCTACTGCTCTGATATGACGCGCACCTTGCTGGTGAATGGCGAAGGGGTGAGCGCCGAATCTCACCTGCTGTTTAACGTCTATCAAATTGTCCTGCAGGCACAGCTCGCAGCAATCTCCGCGATTCGCCCCGGCG > 1:492524/1‑148 GCGC‑T‑GTATCAGGGCTACTGCTCTGATATGACGCGCACCTTGCTGGTGAATGGCGAAGGGGTGAGCGCCGAATCTCACCTGCTGTTTAACGTCTATCAAATTGTCCTGCAGGCACAGCTCGCAGCAATCTCCGCGATTCGCCCCGGCG < 2:492524/148‑1 AATCGCGGAGATTGCTGCGAGCTGTGCCTGCAGGACAATTTGATAGACGTTAAACAGCAGGTGAGATTCGGCGCTCACCCCTTCGCCATTCACCAGCAAGGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2505853‑2505958‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcgc‑T‑GTATCAGGGCTACTGCTCTGATATGACGCGCACCTTGCTGGTGAATGGCGAAGGGGTGAGCGCCGAATCTCACCTGCTGTTTAACGTCTATCAAATTGTCCTGCAGGCACAGCTCGCAGCAATCTCCGCGATTCGCCCCGGCG < NC_000913/2505986‑2505843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |