New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3721045 =87 (0.930)286 (3.090) 134/198 NT 73.2% noncoding (413/1443 nt) IS150 repeat region
?NC_000913 = 3839774 123 (1.330)coding (220/819 nt) nlpA cytoplasmic membrane lipoprotein‑28

Only 100 of 335 total aligned reads displayed.

GTGGGATGAGCTAAGGCTTTCAGCTTTTTTAGATACATAAGCCGCGTTTCAAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3721191‑3721045
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGTCTTCCCTATGGCGGGTTATTCCAAAAAAA  <  NC_000913/3839774‑3839630
                                                                                                                                                                                                                                                                                                    
GTGGGATGAGCTAAGGCTTTCAGCTTTTTTAGATACATAAGCCGCGTTTCAAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGA                                                                                                                                                  <  2:717764/148‑1
            AAGGCTTTCAGCTTTTTTAGATACATAAGCCGCGTTTCAAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAA                                                                                                                                                 >  2:54868/1‑137
             AGGCTTTCAGCTTTTTTAGATACATAAGCCGCGTTTCAAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACG                                                                                                                                               >  4:845062/1‑138
               GCTTTCAGCTTTTTTAGATACATAAGCCGCGTTTCAAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATC                                                                                                                                   <  4:1125718/148‑1
                  TTCAGCTTTTTTAGATACATAAGCCGCGTTTCAAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGA                                                                                                                                                  >  3:293203/1‑130
                                     TAAGCCGCGTTTCAAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATG                                                                                                                    >  2:1100595/1‑141
                                     TAAGCCGCGTTTCAAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGC                                                                                                                                           >  1:441859/1‑118
                                       AGCCGCGTTTCAAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCT                                                                                                           <  2:786404/148‑1
                                       AGCCGCGTTTCAAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATG                                                                                                                                >  1:1036984/1‑127
                                         CCGCGTTTCAAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGA                                                                                                                      >  2:1027352/1‑135
                                               TTCAAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATG                                                                                                                                            <  2:221396/107‑1
                                               TTCAAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATG                                                                                                                                            >  1:221396/1‑107
                                                  AAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGA                                                                                                                                                  <  2:163453/98‑1
                                                  AAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGA                                                                                                                                                  >  1:163453/1‑98
                                                    GAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACC                                                                                              >  1:864663/1‑148
                                                    GAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCC                                                                                                        >  2:640334/1‑138
                                                    GAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCC                                                                                                        <  1:640334/138‑1
                                                    GAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCA                                                                                                                                  <  4:331855/112‑1
                                                    GAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAA                                                                                                                                                 <  4:641353/97‑1
                                                    GAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGA                                                                                                                                                  <  2:452193/96‑1
                                                     AAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGA                                                                                                >  1:214614/1‑145
                                                     AAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTT                                                                                                          >  4:798573/1‑135
                                                        TCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTT                                                                                          <  1:403559/148‑1
                                                        TCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATG                                                                                                                                                   <  2:899908/91‑1
                                                         CGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAAC                                                                                                                          >  4:504626/1‑115
                                                           AACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGC                                                                                                     <  2:227249/134‑1
                                                           AACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATG                                                                                                                                <  1:281546/107‑1
                                                           AACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCAT                                                                                                                                 <  4:103531/106‑1
                                                             CTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTT                                                                                                          <  3:669729/127‑1
                                                              TTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATa                                                                                                                    <  1:264260/116‑2
                                                                GCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACA                                                                                  >  1:472460/1‑148
                                                                  CTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTGCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAG                                                                                <  2:864663/148‑1
                                                                   TTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTC                                                                                                         >  2:321306/1‑122
                                                                   TTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAA                                                                                                                <  2:46172/115‑1
                                                                    TTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTT                                                                                                          >  4:431761/1‑120
                                                                    TTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGA                                                                                                                      <  4:764350/108‑1
                                                                    TTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAAC                                                                                                                          <  3:97971/104‑1
                                                                        AGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTT                                                                                                          <  1:1000465/116‑1
                                                                        AGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTT                                                                                                          <  4:302903/116‑1
                                                                          ATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCG                                                                                                 >  1:181707/1‑123
                                                                          ATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTC                                                                                                         <  4:172763/115‑1
                                                                            CCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCAT                                                                                                                                 <  4:1010936/89‑1
                                                                            CCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCAT                                                                                                                                 >  1:67874/1‑89
                                                                              TCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAG                                                                                >  3:792208/1‑136
                                                                              TCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTT                                                                                                          <  3:168693/110‑1
                                                                               CAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTT                                                                                          <  2:38963/125‑1
                                                                                  TGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTT                                                                                           <  2:608564/121‑1
                                                                                      TCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCG                                                                     <  3:829049/139‑1
                                                                                      TCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTC                                                                                                         <  3:429371/103‑1
                                                                                       CGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAA                                                                                                                >  1:461197/1‑95
                                                                                           CTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTT                                                                                          >  2:177146/1‑113
                                                                                             TTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGG                                                     >  1:888243/1‑148
                                                                                             TTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGT                                                               >  1:699487/1‑138
                                                                                             TTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAG                                                                                <  3:922151/121‑1
                                                                                                 ACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTT                                                              >  3:100897/1‑135
                                                                                                  CAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACA                                                                                  <  3:572995/114‑1
                                                                                                     CTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTG                                             <  1:42024/148‑1
                                                                                                       CCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTC                                                                                                            >  3:517391/1‑83
                                                                                                       CCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGA                                                                                                                                                  <  2:209517/45‑1
                                                                                                         AATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGT                                                    >  3:1023125/1‑137
                                                                                                         AATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTT                                                                                                          >  3:155879/1‑83
                                                                                                         AATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTT                                                                                                          <  4:155879/83‑1
                                                                                                         AATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAAT                                                                                                                                    <  2:403886/57‑1
                                                                                                          ATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGA                                                                                                                 >  1:963198/1‑75
                                                                                                           TGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTG                                             >  1:602290/1‑142
                                                                                                           TGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCAT                                                                                                                                 <  4:983198/58‑1
                                                                                                           TGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCAT                                                                                                                                 >  2:268603/1‑58
                                                                                                                 TGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTT                                                                                                          >  4:375560/1‑75
                                                                                                                 TGCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTT                                                                                                          <  3:375560/75‑1
                                                                                                                  GCCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGG                                                     >  3:1066505/1‑127
                                                                                                                   CCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGT                               <  1:240970/148‑1
                                                                                                                   CCGCTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGT                               >  2:240970/1‑148
                                                                                                                      CTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACG                                    <  4:1102830/140‑1
                                                                                                                      CTTTTTCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTA                                                   >  3:328235/1‑125
                                                                                                                           TCTGGATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGTCTTCCCTA                       <  1:986391/148‑1
                                                                                                                               GATCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGTCTTCCCTATGG                    <  4:209432/147‑1
                                                                                                                                 TCAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGT                                                               >  3:991998/1‑102
                                                                                                                                  CAACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATG                                                                 >  2:679876/1‑99
                                                                                                                                   AACTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGTCTTCCCTATGGCGGGT               <  2:978952/148‑1
                                                                                                                                     CTGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAA                                                                                                                <  1:1106323/49‑1
                                                                                                                                      TGATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGTCTTCCCTATGGCGGGTTAT            >  2:874587/1‑148
                                                                                                                                       GATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTG                                                      >  2:1065826/1‑105
                                                                                                                                        ATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGTCTTCCCTATGGCGGGTTATTC          >  1:351988/1‑148
                                                                                                                                        ATATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTT                                                              >  2:422176/1‑96
                                                                                                                                         TATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAA                                                         >  1:1072031/1‑100
                                                                                                                                          ATTGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGTCTTCCCTATGGCGGGTTA             >  3:1108865/1‑143
                                                                                                                                            TGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGTCTTCCCTATGGCGG                 >  3:481865/1‑137
                                                                                                                                            TGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGTCTTCCCTATGGCGG                 <  4:481865/137‑1
                                                                                                                                            TGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGT                                   >  2:498253/1‑119
                                                                                                                                            TGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATA                                      >  3:859848/1‑116
                                                                                                                                            TGCAATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCAT                                                                  >  4:860288/1‑88
                                                                                                                                                ATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGTCTTC                           >  4:266198/1‑123
                                                                                                                                                ATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGTCTTC                           <  3:266198/123‑1
                                                                                                                                                ATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATA                                      >  3:187163/1‑112
                                                                                                                                                ATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAA                                         >  4:923783/1‑109
                                                                                                                                                ATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAG                                                                        >  1:786717/1‑78
                                                                                                                                                ATGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTC                                                                                         >  1:548268/1‑61
                                                                                                                                                ATGAACGATGCGACAAATCATGGCGAACTTGATGCGA                                                                                                                 >  4:554232/1‑37
                                                                                                                                                  GAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTG                                             >  2:1059060/1‑103
                                                                                                                                                  GAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTATTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTG                                             <  1:1059060/103‑1
                                                                                                                                                                                                                                                                                                    
GTGGGATGAGCTAAGGCTTTCAGCTTTTTTAGATACATAAGCCGCGTTTCAAGAAATCGAACTTGCCTTTCAAGATCCTCAATGCGTCGGTCTTTTGACAGCTCCAATGCTGATGCCGCTTTTTCTGGATCAACTGATATTGCAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3721191‑3721045
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGTCTTCCCTATGGCGGGTTATTCCAAAAAAA  <  NC_000913/3839774‑3839630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.