| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4523274 = | 114 (1.220) | 4 (0.040) | 4/192 | NT | 3.6% | coding (821/1968 nt) | yjhG | putative dehydratase |
| ? | NC_000913 | 4523298 = | 104 (1.160) | coding (797/1968 nt) | yjhG | putative dehydratase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGCGGGAGATCGCCAGAGCTTCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4523298‑4523274‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcCACACAGGCTCACCGGAAGGGGCCAGGGCTGAATGTGGGATTGCCAGTCCCAATCCTTCGGCCACCACCTGAGATGTCCCGGCAGTG > NC_000913/4523298‑4523384 GGCGGGAGATCGCCAGAGCTTCCGCCACACAGGCTCACCGGAAGGGGCCAGGGCTGAATGTGGGTTTGCCAGTCCCAATCCTTCGGCCACCACCTG < 4:955481/96‑1GGCGGGAGATCGCCAGAGCTTCCGCCACACAGGCTCACCGGAAGGGGCCAGGGCTGAATGTGGGATTGCCAGTCCCAATCCTTCGGCCACCACCTG > 3:955481/1‑96 GAGATCGCCAGAGCTTCCGCCACACAGGCTCACCGGAAGGGGCCAGGGCTGAATGTGGG < 1:515382/59‑1 GAGATCGCCAGAGCTTCCGCCACACAGGCTCACCGGAAGGGGCCAGGGCTGAATGTGGG > 2:515382/1‑59 CCGCCACACAGGCTCACCGGAAGGGGCCAGGGCTGAATGTGGGATTGCCAGTCCCAATCCTTCGGCCACCACCTGAGATGTCCCGGCAGTG < 1:40401/91‑1 CCGCCACACAGGCTCACCGGAAGGGGCCAGGGCTGAATGTGGGATTGCCAGTCCCAATCCTTCGGCCACCACCTGAGATGTCCCGGCAGTG > 2:40401/1‑91 CGCCACACAGGCTCACCGGAAGGGGCCAGGGCTGAATGTGGGATTG < 1:721676/46‑1 CGCCACACAGGCTCACCGGAAGGGGCCAGGGCTGAATGTGGGATTG > 2:721676/1‑46 GGCGGGAGATCGCCAGAGCTTCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4523298‑4523274‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcCACACAGGCTCACCGGAAGGGGCCAGGGCTGAATGTGGGATTGCCAGTCCCAATCCTTCGGCCACCACCTGAGATGTCCCGGCAGTG > NC_000913/4523298‑4523384 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |