New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 44457534 (0.360)4 (0.050) 4/164 NT 12.7% intergenic (‑60/‑108) panE/yajQ 2‑dehydropantoate reductase, NADPH‑specific/phage Phi6 host factor, ATP/GTP binding protein
?NC_000913 = 444587 27 (0.350)intergenic (‑72/‑96) panE/yajQ 2‑dehydropantoate reductase, NADPH‑specific/phage Phi6 host factor, ATP/GTP binding protein

Only 100 of 103 total aligned reads displayed.

CCCTGAACTTCATGACCCTGTTTGCAAAGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGAAGGGAGAGGAAAAGATGCCATCTTTCGATATTGTCTCTGAAGTTGATCTTC  >  NC_000913/444433‑444719
                                                                                                                                              |                                                                                                                                                
cccTGAACTTCATGACCCTGTTTGCAAAGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGt                                                                                                                                             >  4:71234/1‑148 (MQ=255)
cccTGAACTTCATGACCCTGTTTGCAAAGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGt                                                                                                                                             >  4:452447/1‑148 (MQ=255)
     aaCTTCATGACCCTGTTTGCAAAGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGa                                                                                                                                        <  4:322674/148‑1 (MQ=255)
         tCATGACCCTGTTTGCAAAGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGa                                                                                                                                        <  2:607364/144‑1 (MQ=255)
         tCATGACCCTGTTTGCAAAGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGa                                                                                                                                        >  1:607364/1‑144 (MQ=255)
           aTGACCCTGTTTGCAAAGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgc                                                                                                                                  >  3:452447‑M2/1‑144 (MQ=255)
           aTGACCCTGTTTGCAAAGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgc                                                                                                                                  >  3:71234‑M2/1‑144 (MQ=255)
              aCCCTGTTTGCAAAGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcaca                                                                                                                               <  4:272201‑M2/148‑8 (MQ=255)
                 cTGTTTGCAAAGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgc                                                                                                                                  >  3:236673‑M2/1‑138 (MQ=255)
                 cTGTTTGCAAAGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgc                                                                                                                                  <  4:236673‑M2/142‑5 (MQ=255)
                    tttGCAAAGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaattaag                                                                                                                         >  3:272201‑M2/1‑135 (MQ=255)
                         aaaGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaattaagggata                                                                                                                    >  1:1057423‑M2/1‑130 (MQ=255)
                          aaGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgc                                                                                                                                  <  2:178889‑M2/133‑5 (MQ=255)
                          aaGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgc                                                                                                                                  >  1:178889‑M2/1‑129 (MQ=255)
                           aGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTg                                                                                                                                           <  4:16973/123‑1 (MQ=255)
                           aGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTg                                                                                                                                           >  3:16973/1‑123 (MQ=255)
                           aGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACg                                                                                                                  >  1:944266/1‑148 (MQ=255)
                                  tAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGt                                                                                                           <  1:519259/148‑1 (MQ=255)
                                   aaGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGc                                                                                                                                                >  3:553384/1‑110 (MQ=255)
                                   aaGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGc                                                                                                                                                <  4:553384/110‑1 (MQ=255)
                                            ttGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaatta                                                                                                                           >  1:244108‑M2/1‑111 (MQ=255)
                                                 cTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATagtcgcaacagcatgcacaattaagggat                                                                                                                     <  1:191174‑M1/123‑30 (MQ=255)
                                                 cTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATagtcgcaacagcatgcacaattaagggat                                                                                                                     >  2:191174‑M1/1‑94 (MQ=255)
                                                  tAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACt                                                                                                                                      <  4:863321/105‑1 (MQ=255)
                                                    aGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCg                                                                                                                                         <  2:137112/100‑1 (MQ=255)
                                                    aGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCg                                                                                                                                         >  1:137112/1‑100 (MQ=255)
                                                                  aaTACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaatta                                                                                                                           <  3:864562‑M2/100‑12 (MQ=255)
                                                                  aaTACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaatta                                                                                                                           >  4:864562‑M2/1‑89 (MQ=255)
                                                                   aTACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaattaa                                                                                                                          <  1:973574‑M2/100‑13 (MQ=255)
                                                                   aTACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaattaa                                                                                                                          >  2:973574‑M2/1‑88 (MQ=255)
                                                                    tACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCg                                                                                               <  2:59069/126‑1 (MQ=255)
                                                                    tACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCg                                                                                               >  1:59069/1‑126 (MQ=255)
                                                                        gTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaattaag                                                                                                                         >  3:763621‑M2/1‑83 (MQ=255)
                                                                        gTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaattaag                                                                                                                         <  4:763621‑M2/96‑14 (MQ=255)
                                                                               tCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaattaaggga                                                                                                                      >  3:938295‑M2/1‑76 (MQ=255)
                                                                               tCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaattaaggga                                                                                                                      <  4:938295‑M2/92‑17 (MQ=255)
                                                                                   tGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcagaattaa                                                                                                                          >  4:202767‑M2/1‑72 (MQ=255)
                                                                                   tGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcagaattaa                                                                                                                          <  3:202767‑M2/84‑13 (MQ=255)
                                                                                   tGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaattaa                                                                                                                          <  1:250842‑M2/84‑13 (MQ=255)
                                                                                   tGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaattaa                                                                                                                          >  2:250842‑M2/1‑72 (MQ=255)
                                                                                             cACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACt                                                                                                                                      <  4:101584/62‑1 (MQ=255)
                                                                                             cACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACt                                                                                                                                      >  3:956487/1‑62 (MQ=255)
                                                                                             cACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACt                                                                                                                                      >  3:101584/1‑62 (MQ=255)
                                                                                                 cGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATagtcgcaacagcatgcaca                                                                                                                               <  1:178693‑M1/65‑20 (MQ=255)
                                                                                                 cGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATagtcgcaacagcatgcaca                                                                                                                               >  2:178693‑M1/1‑46 (MQ=255)
                                                                                                     aCCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaattaag                                                                                                                         <  1:1102246‑M2/67‑14 (MQ=255)
                                                                                                     aCCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTatgcacaattaag                                                                                                                         >  2:1102246‑M2/1‑54 (MQ=255)
                                                                                                     aCCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAgg                                                                                                      <  3:547738/86‑1 (MQ=255)
                                                                                                     aCCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAgg                                                                                                      >  4:547738/1‑86 (MQ=255)
                                                                                                         cTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGa                                                                                                                                        <  3:131939/48‑1 (MQ=255)
                                                                                                         cTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGa                                                                                                                                        >  4:131939/1‑48 (MQ=255)
                                                                                                                      aTAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGAAGGGAGAGGAAAAGATGCCATCTTTCGata                       >  2:680289/1‑148 (MQ=255)
                                                                                                                             tATCCCTTAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtattgggatgcggtgccttagggcaattatggcttacagcacttt                >  1:1057423‑M1/1‑18 (MQ=255)
                                                                                                                              aTCCCTTAATTGTGCATGCTGTTGCGACTatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtattgggatgcggtgccttag                                        >  2:191174‑M2/1‑29 (MQ=255)
                                                                                                                              aTCCCTTAATTGTGCATGCTGTTGCGACTatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtattgggatgcggtgccttag                                        <  1:191174‑M2/123‑95 (MQ=255)
                                                                                                                               tCCCTTAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatga                                                                      <  4:938295‑M1/92‑77 (MQ=255)
                                                                                                                               tCCCTTAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatga                                                                      >  3:938295‑M1/1‑16 (MQ=255)
                                                                                                                                  cTTAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtattgggatgcggtgccttagggcaattatggcttacagcactttgcaaa           >  3:272201‑M1/1‑13 (MQ=255)
                                                                                                                                  cTTAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattac                                                               <  4:763621‑M1/96‑84 (MQ=255)
                                                                                                                                  cTTAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattac                                                               >  3:763621‑M1/1‑13 (MQ=255)
                                                                                                                                  cTTAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggt                                                                                            <  1:1102246‑M1/67‑55 (MQ=255)
                                                                                                                                  cTTAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggt                                                                                            >  2:1102246‑M1/1‑13 (MQ=255)
                                                                                                                                   ttAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtat                                                          >  2:973574‑M1/1‑12 (MQ=255)
                                                                                                                                   ttAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtat                                                          <  1:973574‑M1/100‑89 (MQ=255)
                                                                                                                                   ttAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaaca                                                                          <  1:250842‑M1/84‑73 (MQ=255)
                                                                                                                                   ttAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaaca                                                                          >  2:250842‑M1/1‑12 (MQ=255)
                                                                                                                                   ttAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCtt                                                                   <  3:1028931/91‑1 (MQ=255)
                                                                                                                                   ttAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCtt                                                                   >  4:1028931/1‑91 (MQ=255)
                                                                                                                                   ttAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGa                                                     <  2:391828/105‑1 (MQ=255)
                                                                                                                                   ttAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGa                                                     <  4:58251/105‑1 (MQ=255)
                                                                                                                                   ttAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGa                                                     >  3:58251/1‑105 (MQ=255)
                                                                                                                                   ttAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGa                                                     >  1:391828/1‑105 (MQ=255)
                                                                                                                                   ttAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGAAGGGAGAGGAAAAGATGCCATCTTTCGATAtt                     <  3:1008168/137‑1 (MQ=255)
                                                                                                                                   ttAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGAAGGGAGAGGAAAAGATGCCATCTTTCGATAtt                     >  4:1008168/1‑137 (MQ=255)
                                                                                                                                   ttAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGAAGGGAGAGGAAAAGATGCCATCTTTCGATATTGTCTCTGa             <  4:1036137/145‑1 (MQ=255)
                                                                                                                                   ttAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGAAGGGAGAGGAAAAGATGCCATCTTTCGATATTGTCTCTGa             >  3:1036137/1‑145 (MQ=255)
                                                                                                                                   ttAATTCTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaaca                                                                          >  4:202767‑M1/1‑12 (MQ=255)
                                                                                                                                   ttAATTCTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaaca                                                                          <  3:202767‑M1/84‑73 (MQ=255)
                                                                                                                                    tAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtattgggatgcggtgccttagggcaa                                   <  2:244108‑M1/122‑112 (MQ=255)
                                                                                                                                    tAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtattgggatgcggtgccttagggcaa                                   >  1:244108‑M1/1‑11 (MQ=255)
                                                                                                                                    tAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtatt                                                         >  4:864562‑M1/1‑11 (MQ=255)
                                                                                                                                    tAATTGTGCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtatt                                                         <  3:864562‑M1/100‑90 (MQ=255)
                                                                                                                                    tAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTaa                                                                                      <  1:939181/71‑1 (MQ=255)
                                                                                                                                    tAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTaa                                                                                      >  2:939181/1‑71 (MQ=255)
                                                                                                                                        tgtgCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtattgggatgcggtgccttagggcaattatggcttacagcactttgcaaacagggt     <  4:272201‑M1/148‑142 (MQ=255)
                                                                                                                                        tgtgCATGCTGTTGCGACTatgcacaattaagggatagccttattgaacacccggagtggttgcg                                                                                        >  2:178693‑M2/1‑19 (MQ=255)
                                                                                                                                        tgtgCATGCTGTTGCGACTatgcacaattaagggatagccttattgaacacccggagtggttgcg                                                                                        <  1:178693‑M2/65‑47 (MQ=255)
                                                                                                                                          tgCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGAAGGGAGAGGAAAAGATGCCATCTTTCGATATTGTCTCTGAAGTTGATCtt   >  4:54531/1‑148 (MQ=255)
                                                                                                                                           gCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtattgggatgcggtgccttagggcaattatggcttacagcactttgcaaacagggtcat  >  3:71234‑M1/1‑4 (MQ=255)
                                                                                                                                           gCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtattgggatgcggtgccttagggcaattatggcttacagcactttgcaaacagggtcat  >  3:452447‑M1/1‑4 (MQ=255)
                                                                                                                                           gCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtattgggatgcggtgccttagggcaattatggcttacagcactttgcaaacag        <  4:236673‑M1/142‑139 (MQ=255)
                                                                                                                                           gCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtattgggatgcggtgccttagggcaattatggcttacagcactttgcaaacag        >  3:236673‑M1/1‑4 (MQ=255)
                                                                                                                                           gCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtattgggatgcggtgccttagggcaattatggcttacagcactt                 >  1:178889‑M1/1‑4 (MQ=255)
                                                                                                                                           gCATagtcgcaacagcatgcacaattaagggatagccttattgaacacccggagtggttgcgggtgaggaggaacaatgaaaattaccgtattgggatgcggtgccttagggcaattatggcttacagcactt                 <  2:178889‑M1/133‑130 (MQ=255)
                                                                                                                                            cATGCTGTTGCGACTATGCACAATTAATGGATACGTCCTGGTGCAgg                                                                                                      >  3:728170/1‑47 (MQ=255)
                                                                                                                                            cATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAgg                                                                                                      <  4:728170/47‑1 (MQ=255)
                                                                                                                                            cATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGAAGGGAGAGGAAAAGATGCCATCTTTCGATATTGTCTCTGa             <  3:682233/136‑1 (MQ=255)
                                                                                                                                            cATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGAAGGGAGAGGAAAAGATGCCATCTTTCGATATTGTCTCTGa             >  4:682233/1‑136 (MQ=255)
                                                                                                                                              tGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGAAGGGAGAGGaaa                                         <  1:535669/106‑1 (MQ=255)
                                                                                                                                              tGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGAAGGGAGAGGaaa                                         >  2:535669/1‑106 (MQ=255)
                                                                                                                                              |                                                                                                                                                
CCCTGAACTTCATGACCCTGTTTGCAAAGTGCTGTAAGCCATAATTGCCCTAAGGCACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATGCTGTTGCGACTATGCACAATTAAGGGATACGTCCTGGTGCAGGACTGTCGGTTATTTAACTTTGCGGGTATTATGCTTCGCATCAAAAATGAAGGGAGAGGAAAAGATGCCATCTTTCGATATTGTCTCTGAAGTTGATCTTC  >  NC_000913/444433‑444719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.