| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 644022 = | 45 (0.480) | 12 (0.140) | 12/184 | NT | 21.5% | intergenic (‑55/+175) | rnk/rna | regulator of nucleoside diphosphate kinase/ribonuclease I |
| ? | NC_000913 | 644051 = | 46 (0.540) | intergenic (‑84/+146) | rnk/rna | regulator of nucleoside diphosphate kinase/ribonuclease I | |||||
GATTGGCAAACCAGCATAGGCGGGTTGCTCCAGCAGAATATCGATGCGTTCGGCATCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTCAGGGAATTCCTCAATGCA > NC_000913/643878‑644125 | atctgatttacaaaacacgctaattcgtcttccataaaccaaggcgattaagatttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAAc > 1:827566‑M1/145‑148 (MQ=255) aaaCCAGCATAGGCGGGTTGCTCCAGCAGAATATCGATGCGTTCGGCATCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGaa < 4:745249/138‑1 (MQ=255) aaaCCAGCATAGGCGGGTTGCTCCAGCAGAATATCGATGCGTTCGGCATCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGaa > 3:745249/1‑138 (MQ=255) aTAGGCGGGTTGCTCCAGCAGAATATCGATGCGTTCGGCATCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAggcg > 4:130526/1‑148 (MQ=255) ttcgtcttccataaaccaaggcgattaagatttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCt < 4:334081‑M1/7‑1 (MQ=255) ttcgtcttccataaaccaaggcgattaagatttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCt < 4:636167‑M1/7‑1 (MQ=255) ttcgtcttccataaaccaaggcgattaagatttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCt > 3:334081‑M1/122‑128 (MQ=255) ttcgtcttccataaaccaaggcgattaagatttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCt > 3:636167‑M1/122‑128 (MQ=255) tcgtcttccataaaccaaggcgattaagatttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCTCACCGTCAGgcggcg > 4:616277‑M1/121‑142 (MQ=255) tcgtcttccataaaccaaggcgattaagatttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCTCACCGTCAGgcggcg < 3:616277‑M1/22‑1 (MQ=255) tccataaaccaaggcgattaagatttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttaaa > 1:252530‑M1/115‑117 (MQ=255) tccataaaccaaggcgattaagatttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttaaa < 2:252530‑M1/3‑1 (MQ=255) gcagAATATCGATGCGTTCGGCATCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTca < 1:333642/147‑1 (MQ=255) gcagAATATCGATGCGTTCGGCATCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTca > 2:333642/1‑147 (MQ=255) ataaaccaaggcgattaagatttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCTCACCGTCAGGCGGCGAggg < 2:141075‑M1/26‑1 (MQ=255) ataaaccaaggcgattaagatttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCTCACCGTCAGGCGGCGAggg > 1:141075‑M1/112‑137 (MQ=255) atCGATGCGTTCGGCATCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCt < 4:237288/112‑1 (MQ=255) atCGATGCGTTCGGCATCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCt > 3:237288/1‑112 (MQ=255) atCGATGCGTTCGGCATCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGgcggcg > 3:628495/1‑127 (MQ=255) atCGATGCGTTCGGCATCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGgcggcg < 4:628495/127‑1 (MQ=255) tCGATGCGTTCGGCATCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATgatgat < 3:130526/148‑1 (MQ=255) aggcgattaagatttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCTCACCGTCAGGCGGCGAg > 1:1049176‑M1/104‑127 (MQ=255) aggcgattaagatttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCTCACCGTCAGGCGGCGAg < 2:1049176‑M1/24‑1 (MQ=255) tCGGCATCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGt > 2:495721/1‑148 (MQ=255) gCATCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGc > 2:602557/1‑148 (MQ=255) ttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCTCACCGTCAGGCGGCGAgg > 4:564735‑M1/91‑115 (MQ=255) ttatacataatgcgctgcattgaggaattccctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCTCACCGTCAGGCGGCGAgg < 3:564735‑M1/25‑1 (MQ=255) aTCCAGGTCGTTAATGTTGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACatg > 2:182951/1‑129 (MQ=255) aTCCAGGTCGTTAATGATGATAGTTGGTCTAGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACatg < 1:182951/129‑1 (MQ=255) tCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCa < 1:602557/148‑1 (MQ=255) ggTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATactg < 1:778081/133‑1 (MQ=255) ggTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATactg > 2:778081/1‑133 (MQ=255) gTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCtt < 1:495721/148‑1 (MQ=255) tCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAgg < 4:386399/100‑1 (MQ=255) tCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAgg > 3:386399/1‑100 (MQ=255) tgatAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGa > 2:702657/1‑140 (MQ=255) tgatAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGa < 1:702657/140‑1 (MQ=255) gatAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAAccc > 2:535419/1‑78 (MQ=255) gatAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAAccc < 1:535419/78‑1 (MQ=255) ttGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGaaaa < 1:510883/70‑1 (MQ=255) ttGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGaaaa > 2:510883/1‑70 (MQ=255) cTGGAAATTTGTACTCCATGTCGTCGGGGCTGCGAGTGTCGCAGATAAACCTACCCAAAAGAAAACCCTCACCGGCAGGCGGAGAGGGTTTAACTCACATGATGATACTGCCTGTTGCGAACTCTTTGAAGTGATTTGCGTCACATTc > 3:669638/1‑148 (MQ=255) ctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCTCACCGTCAGGCGGCGAgg > 3:146317‑M1/60‑84 (MQ=255) ctgaatgtgacgcaaatcacttcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCTCACCGTCAGGCGGCGAgg < 4:146317‑M1/25‑1 (MQ=255) tCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCttt > 4:466135/1‑113 (MQ=255) tCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCttt < 3:466135/113‑1 (MQ=255) ccATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCttt > 4:328076/1‑112 (MQ=255) ccATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCttt < 3:328076/112‑1 (MQ=255) aTGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAAcc > 4:642180/1‑50 (MQ=255) aTGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAAcc < 3:642180/50‑1 (MQ=255) aTGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATTATGATACTGACTGt < 4:846241/98‑1 (MQ=255) aTGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGt > 3:846241/1‑98 (MQ=255) tGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAg > 2:163306/1‑68 (MQ=255) tGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAg < 1:163306/68‑1 (MQ=255) gtcgtcGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTg > 1:1001064/1‑98 (MQ=255) gtcgtcGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTg < 2:1001064/98‑1 (MQ=255) tcgGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTc < 3:353190/125‑1 (MQ=255) tcgGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTc > 4:353190/1‑125 (MQ=255) tcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCTCACCGTCAGGCGGCGAggg < 3:956678‑M1/26‑1 (MQ=255) tcaaagagtgagcaacagtcagtatcatcatgtgagttAAACCCTCACCGTCAGGCGGCGAggg > 4:956678‑M1/39‑64 (MQ=255) tgctgcGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGtt < 2:89566/89‑1 (MQ=255) tgctgcGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGtt > 1:89566/1‑89 (MQ=255) gctgcGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATgatgat > 2:123895/1‑78 (MQ=255) gctgcGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATgatgat < 1:123895/78‑1 (MQ=255) gcGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTCAGGGAATTCCTCa < 4:142913/130‑1 (MQ=255) gcGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTCAGGGAATTCCTCa > 3:142913/1‑130 (MQ=255) aaaaGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTCAGGGAAtt > 2:98918/1‑100 (MQ=255) aaaaGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTCAGGGAAtt < 1:98918/100‑1 (MQ=255) aaaaGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTCAGGGAATTCCTCAATGCa < 2:927653/110‑1 (MQ=255) aaaaGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTCAGGGAATTCCTCAATGCa > 1:927653/1‑110 (MQ=255) aaaGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGa > 2:1040779/1‑72 (MQ=255) aaaGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGa < 1:1040779/72‑1 (MQ=255) aaGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTCAGGGAAt > 2:866716/1‑97 (MQ=255) aaGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTCAGGGAAt < 1:866716/97‑1 (MQ=255) tAAACCCTCGCCGCCTGACGGTGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTCAGGGAATTcc < 2:668943‑M1/96‑1 (MQ=255) tAAACCCTCGCCGCCTGACGGTGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTCAGGGAATTcc > 1:668943‑M1/2‑97 (MQ=255) aaaaCCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTCAg < 4:317896/89‑1 (MQ=255) aaaaCCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTCAg > 3:317896/1‑89 (MQ=255) | GATTGGCAAACCAGCATAGGCGGGTTGCTCCAGCAGAATATCGATGCGTTCGGCATCCAGGTCGTTAATGATGATAGTTGGTCTGGACATTTTTACTCCATGTCGTCGGTGCTGCGAGTGTCGCAGATAAACATACCCAAAAGAAAACCCTCACCGTCAGGCGGCGAGGGTTTAACTCACATGATGATACTGACTGTTGCTCACTCTTTGAAGTGATTTGCGTCACATTCAGGGAATTCCTCAATGCA > NC_000913/643878‑644125 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |