BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	766061 =	100 (1.070)	16 (0.180)	7/194	NT	13.7%	coding (78/1977 nt)	mngA	fused 2‑O‑a‑mannosyl‑D‑glycerate specific PTS enzymes: IIA component/IIB component/IIC component
*	?	NC_000913	766084 =	104 (1.150)	16 (0.180)	7/194	NT	13.7%	coding (101/1977 nt)	mngA	fused 2‑O‑a‑mannosyl‑D‑glycerate specific PTS enzymes: IIA component/IIB component/IIC component

Only 100 of 131 total aligned reads displayed.

TCCTGTAAATAATACAAATACAATACAAATAATTTCAATCAAGTGAAATTGATCACATAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACTGAGCAATTTCTGGAAGAAGTGTATCGCCGTGAAAGCCT  >  NC_000913/765925‑766204

aaggcggtcgggccaaggctttcacggcgatacacttcttccagaaattgctcagtactggaaattttccccagagcagcaagacgttgagtcaacgcgtggatggcctcttcacggctggtaaagcgcgcattcaGACCCACCGCGa                                                                                                                                      <  4:134930‑M1/12‑1 (MQ=255)

aaggcggtcgggccaaggctttcacggcgatacacttcttccagaaattgctcagtactggaaattttccccagagcagcaagacgttgagtcaacgcgtggatggcctcttcacggctggtaaagcgcgcattcaGACCCACCGCGa                                                                                                                                      <  4:946001‑M1/12‑1 (MQ=255)

         gggccaaggctttcacggcgatacacttcttccagaaattgctcagtactggaaattttccccagagcagcaagacgttgagtcaacgcgtggatggcctcttcacggctggtaaagcgcgcattcaGACCCACCGCGATGCGTtgtg                                                                                                                             >  3:946001‑M1/128‑148 (MQ=255)

         gggccaaggctttcacggcgatacacttcttccagaaattgctcagtactggaaattttccccagagcagcaagacgttgagtcaacgcgtggatggcctcttcacggctggtaaagcgcgcattcaGACCCACCGCGATGCGTtgtg                                                                                                                             >  3:134930‑M1/128‑148 (MQ=255)

          ggccaaggctttcacggcgatacacttcttccagaaattgctcagtactggaaattttccccagagcagcaagacgttgagtcaacgcgtggatggcctcttcacggctggtaaagcgcgcattcaGACCCACCGCGATGCGTTgtgt                                                                                                                            >  1:900931‑M1/127‑148 (MQ=255)

          ggccaaggctttcacggcgatacacttcttccagaaattgctcagtactggaaattttccccagagcagcaagacgttgagtcaacgcgtggatggcctcttcacggctggtaaagcgcgcattcaGACCCACCGCGATGCGTTgtgt                                                                                                                            >  2:710461‑M1/127‑148 (MQ=255)

             acaaatacaaTACAAATAATTTCAATCAAGTGAAATTGATCACATAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTg                                                                                                                         >  1:300505/1‑148 (MQ=255)

                 atacaatacaAATAATTTCAATCAAGTGAAATTGATCACATAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATg                                                                                                                     >  3:398011/1‑148 (MQ=255)

                   acaatacaaATAATTTCAATCAAGTGAAATTGATCACATAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATgcg                                                                                                                   <  2:300505/148‑1 (MQ=255)

                       tacaaATAATTTCAATCAAGTGAAATTGATCACATAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCt                                                                                                               <  4:398011/148‑1 (MQ=255)

                          aaaTAATTTCAATCAAGTGAAATTGATCACATAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTa                                                                                                            <  2:194539/148‑1 (MQ=255)

                                     atcaaGTGAAATTGATCACATAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGaa                                                                                                 >  3:403324/1‑148 (MQ=255)

                                       tccagaaattgctcagtactggaaattttccccagagcagcaagacgttgagtcaacgcgtggatggcctcttcacggctggtaaagcgcgcattcag                                                                                                                                                 <  2:271149‑M1/1‑1 (MQ=255)

                                               aTTGATCACATAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACcgcg                                                                                                                                       >  4:71480/1‑100 (MQ=255)

                                               aTTGATCACATAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACcgcg                                                                                                                                       <  3:71480/100‑1 (MQ=255)

                                                     cacaTAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACcg                                                                                                                                         <  3:1070265/92‑1 (MQ=255)

                                                     cacaTAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACcg                                                                                                                                         >  4:1070265/1‑92 (MQ=255)

                                                         tAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTg                                                                               <  1:683859/146‑1 (MQ=255)

                                                         tAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTg                                                                               >  2:683859/1‑146 (MQ=255)

                                                         tAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTg                                                                               >  2:58803/1‑146 (MQ=255)

                                                          tggaaattttccccagagcagcaagacgttgagtcaacgcgtggatggcctcttcacggctggtaaagcgcgcattcaGACCCACCGCGATGCGTTgtgt                                                                                                                            >  1:331466‑M1/79‑100 (MQ=255)

                                                          tggaaattttccccagagcagcaagacgttgagtcaacgcgtggatggcctcttcacggctggtaaagcgcgcattcaGACCCACCGCGATGCGTTgtgt                                                                                                                            <  2:331466‑M1/22‑1 (MQ=255)

                                                          aaTGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTc                                                                                                                           >  1:1032068/1‑101 (MQ=255)

                                                          aaTGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTc                                                                                                                           <  2:1032068/101‑1 (MQ=255)

                                                             ggTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTgtgt                                                                                                                            <  2:76535/97‑1 (MQ=255)

                                                             ggTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTgtgt                                                                                                                            >  1:76535/1‑97 (MQ=255)

                                                                aTTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCg                                                                                                                                  >  4:202895/1‑88 (MQ=255)

                                                                aTTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCg                                                                                                                                  <  3:202895/88‑1 (MQ=255)

                                                                 ttGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTc                                                                     <  4:403324/148‑1 (MQ=255)

                                                                  tGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTg                                                                                                                         >  1:490171/1‑95 (MQ=255)

                                                                  tGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTg                                                                                                                         >  3:98659/1‑95 (MQ=255)

                                                                  tGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTg                                                                                                                         <  4:98659/95‑1 (MQ=255)

                                                                  tGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTg                                                                               <  3:563348/137‑1 (MQ=255)

                                                                  tGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTg                                                                               >  4:563348/1‑137 (MQ=255)

                                                                     tttATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCt                                                                                                               >  3:528869/1‑102 (MQ=255)

                                                                     tttATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCt                                                                                                               <  4:528869/102‑1 (MQ=255)

                                                                     tttATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCa                                                                          >  4:754783/1‑139 (MQ=255)

                                                                     tttATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCa                                                                          <  3:754783/139‑1 (MQ=255)

                                                                     tttATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCt                                                                    >  4:1014083/1‑145 (MQ=255)

                                                                     tttATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCt                                                                    <  3:1014083/145‑1 (MQ=255)

                                                                     tttATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTtgc                                                                 >  4:4274/1‑148 (MQ=255)

                                                                     tgtATCGGGCACACTGGAGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGACGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTtgc                                                                 >  4:83596/3‑148 (MQ=255)

                                                                        aTCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGGATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGt                                                                                 >  3:1080038/1‑129 (MQ=255)

                                                                        aTCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGt                                                                                 <  4:1080038/129‑1 (MQ=255)

                                                                         tCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTgctgct                                                             <  3:4274/148‑1 (MQ=255)

                                                                          cGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGctc                                                            >  4:1104359/1‑148 (MQ=255)

                                                                            ggCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGaa                                                                                                                       >  3:340709/1‑87 (MQ=255)

                                                                            ggCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGaa                                                                                                                       <  4:340709/87‑1 (MQ=255)

                                                                            ggCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTg                                                          <  3:83596/148‑1 (MQ=255)

                                                                            ggCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTg                                                          <  3:1104359/148‑1 (MQ=255)

                                                                             gCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGt                                                                                 <  1:618851/124‑1 (MQ=255)

                                                                              cacaCTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATg                                                                                                                                    >  3:15914/1‑72 (MQ=255)

                                                                              cacaCTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATg                                                                                                                                    <  4:15914/72‑1 (MQ=255)

                                                                                cacTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGa                                                                              >  1:209420/1‑124 (MQ=255)

                                                                                cacTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGa                                                                              <  2:209420/124‑1 (MQ=255)

                                                                                aagacgttgagtcaacgcgtggatggcctcttcacggctggtaaagcgcgcattcaGACCCACCGCGATGCGTTgtgt                                                                                                                            <  1:764774‑M1/22‑1 (MQ=255)

                                                                                aagacgttgagtcaacgcgtggatggcctcttcacggctggtaaagcgcgcattcaGACCCACCGCGATGCGTTgtgt                                                                                                                            >  1:1119140‑M1/57‑78 (MQ=255)

                                                                                aagacgttgagtcaacgcgtggatggcctcttcacggctggtaaagcgcgcattcaGACCCACCGCGATGCGTTgtgt                                                                                                                            >  2:764774‑M1/57‑78 (MQ=255)

                                                                                   acgttgagtcaacgcgtggatggcctcttcacggctggtaaagcgcgcattcaGACCCACCGCGATGCGTTgtgt                                                                                                                            >  2:642071‑M1/54‑75 (MQ=255)

                                                                                     gcgcGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAAtt                                                 >  3:1069902/1‑148 (MQ=255)

                                                                                        cgACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTcc                                              <  4:1069902/148‑1 (MQ=255)

                                                                                             ataAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCtt                                                                                                              <  2:557663/79‑1 (MQ=255)

                                                                                             ataAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCtt                                                                                                              >  1:557663/1‑79 (MQ=255)

                                                                                               aaaaaCGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAag                                                                                                >  3:342015/1‑91 (MQ=255)

                                                                                               aaaaaCGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAag                                                                                                <  4:342015/91‑1 (MQ=255)

                                                                                               aaaaaCGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTgg                                                         <  1:752070/130‑1 (MQ=255)

                                                                                               aaaaaCGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTgg                                                         >  2:752070/1‑130 (MQ=255)

                                                                                               aaaaaCGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACTg                                       >  2:756290/1‑148 (MQ=255)

                                                                                               aaaaaCGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACTg                                       <  1:756290/148‑1 (MQ=255)

                                                                                                 aaaCGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTg                                                          <  1:641852/127‑1 (MQ=255)

                                                                                                 aaaCGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTg                                                          >  2:641852/1‑127 (MQ=255)

                                                                                                       tCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGaaa                                                    <  4:357163/127‑1 (MQ=255)

                                                                                                       tCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGaaa                                                    >  3:357163/1‑127 (MQ=255)

                                                                                                        cAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTg                                                          <  3:812522/120‑1 (MQ=255)

                                                                                                        cAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTg                                                          >  4:812522/1‑120 (MQ=255)

                                                                                                                 aTCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACTGAGCAATTTCTGGaagaag                     >  3:845844/1‑148 (MQ=255)

                                                                                                                 aTCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACTGAGCAATTTCTGGaagaag                     >  2:473928/1‑148 (MQ=255)

                                                                                                                     tgatgaATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATgcgcgc                                                                                                                <  2:590405/53‑1 (MQ=255)

                                                                                                                     tgatgaATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATgcgcgc                                                                                                                >  1:590405/1‑53 (MQ=255)

                                                                                                                        tgaATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTc                                                                     <  3:39940/93‑1 (MQ=255)

                                                                                                                        tgaATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTc                                                                     >  4:39940/1‑93 (MQ=255)

                                                                                                                        tgaATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACt                                        <  1:282823/122‑1 (MQ=255)

                                                                                                                           aTCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACTGAGCAATTTCTGGAAGAAGTGTATCGCCg           <  4:845844/148‑1 (MQ=255)

                                                                                                                            tCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATgcg                                                                                                                   <  3:772381/43‑1 (MQ=255)

                                                                                                                            tCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATgcg                                                                                                                   >  4:772381/1‑43 (MQ=255)

                                                                                                                            tCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTcc                                              <  4:113466/112‑1 (MQ=255)

                                                                                                                            tCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTcc                                              >  3:113466/1‑112 (MQ=255)

                                                                                                                               gacgacTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTg                                                          <  1:1091773/97‑1 (MQ=255)

                                                                                                                               gacgacTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAAttt                                                <  2:382465/107‑1 (MQ=255)

                                                                                                                               gacgacTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGAATCAACGTCTTGCTGCTCTg                                                          >  2:1091773/1‑97 (MQ=255)

                                                                                                                                 cgacTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACTGAGCAAt                                 <  3:944919/120‑1 (MQ=255)

                                                                                                                                 cgacTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACTGAGCAAt                                 >  4:944919/1‑120 (MQ=255)

                                                                                                                                    ctctGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACTGAGCAATTTCTGGAAGAAGTGTATCGCCGTGAAAGCCt  <  1:473928/148‑1 (MQ=255)

                                                                                                                                      ctGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAag                                                                                                >  4:489756/1‑52 (MQ=255)

                                                                                                                                      ctGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAag                                                                                                <  3:489756/52‑1 (MQ=255)

                                                                                                                                      ctGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAag                                                                                                <  2:78506/52‑1 (MQ=255)

                                                                                                                                      ctGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAag                                                                                                >  1:78506/1‑52 (MQ=255)

                                                                                                                                      ctGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGt                                                                                 >  4:191516/1‑67 (MQ=255)

                                                                                                                                      ctGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGt                                                                                 <  3:191516/67‑1 (MQ=255)

                                                                                                                                        GACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACTGAGCAATTTCTGGAAGAAgtg                   >  1:688933‑M1/1‑127 (MQ=255)

TCCTGTAAATAATACAAATACAATACAAATAATTTCAATCAAGTGAAATTGATCACATAATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACTGAGCAATTTCTGGAAGAAGTGTATCGCCGTGAAAGCCT  >  NC_000913/765925‑766204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.