New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1225763 =34 (0.360)3 (0.030) 3/194 NT 7.5% coding (318/696 nt) minC inhibitor of FtsZ ring polymerization
?NC_000913 1225804 = 41 (0.450)coding (277/696 nt) minC inhibitor of FtsZ ring polymerization

CAGCGCTAACGTGGCTTGTAACAATCAGATCACATTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTAAGTTGCGCATCTTTGCAGCCACTTACGCCAATAACCCGCAAACCGGTTGC  >  NC_000913/1225621‑1225873
                                                                                                                                              |                                                                                                              
gcccccgttgtactcaacgtcagtgcactggaagacccggtaaactggtcagcgatgcataaggcggtttcggcaaccggtttgcgggttattggcgtaagtggctgcaaagatgcgcaacttaaagccgaaattgaaaagaTGgcgc                                                                                                           <  4:727161‑M1/6‑1 (MQ=255)
               ttGTAACAATCAGATCACATTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGt                                                                                                                >  4:431246/1‑128 (MQ=255)
               ttGTAACAATCAGATCACATTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGt                                                                                                                <  3:431246/128‑1 (MQ=255)
                       aTCAGATCACATTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGgcg                                                                                                            >  4:550777/1‑124 (MQ=255)
                       aTCAGATCACATTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGgcg                                                                                                            <  3:550777/124‑1 (MQ=255)
                       aTCAGATCACATTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCtt                                                                                                         <  1:410526/127‑1 (MQ=255)
                       aTCAGATCACATTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCtt                                                                                                         >  2:410526/1‑127 (MQ=255)
                       aTCAGATCACATTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGa                                                                                    >  3:642776/1‑148 (MQ=255)
                           gATCACATTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAgg                                                                                <  4:642776/148‑1 (MQ=255)
                              cacaTTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTtttccttt                                                                                                 <  4:409035/128‑1 (MQ=255)
                              cacaTTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTtttccttt                                                                                                 >  3:409035/1‑128 (MQ=255)
                              cacaTTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAg                                                                             <  4:666633/148‑1 (MQ=255)
                              cacaTTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAg                                                                             >  3:666633/1‑148 (MQ=255)
                               acaTTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTgg                                                                                                              <  4:747459/114‑1 (MQ=255)
                               acaTTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTgg                                                                                                              >  3:747459/1‑114 (MQ=255)
                                 gacccggtaaactggtcagcgatgcataaggcggtttcggcaaccggtttgcgggttattggcgtaagtggctgcaaagatgcgcaacttaaagccgaaattgaaaagaTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGccc                                                                          >  3:727161‑M1/110‑148 (MQ=255)
                                     cggtaaactggtcagcgatgcataaggcggtttcggcaaccggtttgcgggttattggcgtaagtggctgcaaagatgcgcaacttaaagccgaaattgaaaagaTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATc                                                                      <  4:74094‑M1/43‑1 (MQ=255)
                                     cggtaaactggtcagcgatgcataaggcggtttcggcaaccggtttgcgggttattggcgtaagtggctgcaaagatgcgcaacttaaagccgaaattgaaaagaTGGCGCTTTTTCCTTACCTTCCGTCAGGATAGGCAGCCCCATc                                                                      >  3:74094‑M1/106‑148 (MQ=255)
                                        aGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCttt                                                                   >  1:266606/1‑148 (MQ=255)
                                        aGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCttt                                                                   <  2:266606/148‑1 (MQ=255)
                                                 aCGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCttttt                                                                                                      <  4:444033/104‑1 (MQ=255)
                                                 aCGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCttttt                                                                                                      >  3:444033/1‑104 (MQ=255)
                                                          ggAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCa                                                                <  3:220130/133‑1 (MQ=255)
                                                          ggAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCa                                                                >  4:220130/1‑133 (MQ=255)
                                                                         aTCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCttttt                                                                                                      >  1:227768/1‑80 (MQ=255)
                                                                         aTCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCttttt                                                                                                      <  2:227768/80‑1 (MQ=255)
                                                                               tAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTttccttc                                                                                            >  4:708836/1‑84 (MQ=255)
                                                                               tAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTttccttc                                                                                            <  3:708836/84‑1 (MQ=255)
                                                                                  aCGCGTTTTTGTGACCGGCTTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTtttccttt                                                                                                 <  2:918104/76‑1 (MQ=255)
                                                                                  aCGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTtttccttt                                                                                                 >  1:918104/1‑76 (MQ=255)
                                                                                   cgcgTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTa                                                    >  2:538730/1‑120 (MQ=255)
                                                                                   cgcgTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTa                                                    <  1:538730/120‑1 (MQ=255)
                                                                                              gACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTAAGTTGCGCATCTTTg                                     >  1:57010/1‑124 (MQ=255)
                                                                                              gACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTAAGTTGCGCATCTTTg                                     <  2:57010/124‑1 (MQ=255)
                                                                                                                cgcTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTAAGTTGCGCATCtt                                       <  2:1056013/104‑1 (MQ=255)
                                                                                                                cgcTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGCCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTAAGTTGCGCATCtt                                       >  1:1056013/1‑104 (MQ=255)
                                                                                                                        ccTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTAAGTTGCGCAt                                          >  4:31019/1‑93 (MQ=255)
                                                                                                                        ccTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTAAGTTGCGCAt                                          <  3:31019/93‑1 (MQ=255)
                                                                                                                            cGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTAAGTTGCGCATCttt                                      <  1:796052/93‑1 (MQ=255)
                                                                                                                            cGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTAAGTTGCGCATCttt                                      <  1:237790/93‑1 (MQ=255)
                                                                                                                            cGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTAAGTTGCGCATCttt                                      >  2:237790/1‑93 (MQ=255)
                                                                                                                            cGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTAAGTTGCGCATCttt                                      >  2:796052/1‑93 (MQ=255)
                                                                                                                                  gggAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTAAGTTGCGCATCTTTGCAGCCACTTACGCCAATAACCCGCAAACCGGTTGc  <  4:283604/123‑1 (MQ=255)
                                                                                                                                  gggAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTAAGTTGCGCATCTTTGCAGCCACTTACGCCAATAACCCGCAAACCGGTTGc  >  3:283604/1‑123 (MQ=255)
                                                                                                                                              |                                                                                                              
CAGCGCTAACGTGGCTTGTAACAATCAGATCACATTGTGGAGCATAAATACGCTGACCGGAACGCACCGGGGTATCTATTAAACGCGTTTTTGTGACCGGCGTTGTATTTTGCGCTGGAGCCTGCGGTGTGGGAGCTGGACGTGGCGCTTTTTCCTTTCCTTCCGTCAGGATAGGCAGCCCCATCTTTTCAATTTCGGCTTTAAGTTGCGCATCTTTGCAGCCACTTACGCCAATAACCCGCAAACCGGTTGC  >  NC_000913/1225621‑1225873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.