New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 166805170 (0.750)4 (0.050) 4/188 NT 5.8% coding (514/1221 nt) mlc glucosamine anaerobic growth regulon transcriptional repressor; autorepressor
?NC_000913 = 1668068 65 (0.740)coding (497/1221 nt) mlc glucosamine anaerobic growth regulon transcriptional repressor; autorepressor

GATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGTTTTTTCTGGTGGCGGATAAAAAACTGATCGATATGGGAAAT  >  NC_000913/1667905‑1668180
                                                                                                                                                  |                                                                                                                                 
gATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATcc                                                                                                                                  >  1:701436/1‑148 (MQ=255)
    accaccTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGt                                                                                                                              >  2:687183/1‑148 (MQ=255)
           gAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCGAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACgg                                                                                                                       <  3:856616/148‑1 (MQ=255)
               cacaTCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCa                                                                                                                     <  4:157147/146‑1 (MQ=255)
               cacaTCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCa                                                                                                                     >  3:157147/1‑146 (MQ=255)
                  aTCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACgg                                                                                                                       >  4:350465/1‑141 (MQ=255)
                  aTCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACgg                                                                                                                       <  3:350465/141‑1 (MQ=255)
                          ccccGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAAt                                                                                                        <  1:687183/148‑1 (MQ=255)
                            ccGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAAt                                                                                                        >  1:799346/1‑146 (MQ=255)
                            ccGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAAt                                                                                                        <  2:799346/146‑1 (MQ=255)
                             cgcgTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATGCTCg                                                                                                                               >  1:733614/1‑122 (MQ=255)
                             cgcgTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCg                                                                                                                               <  2:733614/122‑1 (MQ=255)
                              gcgTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATC                                                                                                                                   <  1:430584‑M1/117‑1 (MQ=255)
                              gcgTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATC                                                                                                                                   >  2:430584‑M1/1‑117 (MQ=255)
                                    ggCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTcc                                                                                              <  3:706569/148‑1 (MQ=255)
                                     gCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCg                                                                                             >  2:231198/1‑148 (MQ=255)
                                       aCCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTa                                                                                           >  2:517013/1‑148 (MQ=255)
                                        ccAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCgatg                                                                                                              >  1:232854‑M2/1‑124 (MQ=255)
                                        ccAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCgatg                                                                                                              <  2:232854‑M2/128‑5 (MQ=255)
                                         cAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCgcatgccgttctacgaggatgtaaaag                                                                                                        <  3:504271‑M1/133‑28 (MQ=255)
                                         cAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCgcatgccgttctacgaggatgtaaaag                                                                                                        >  4:504271‑M1/1‑106 (MQ=255)
                                          aaaCAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATCCCATTTCCCGTATCa                                                                                        <  2:701436/148‑1 (MQ=255)
                                          aaaCAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGt                                                                                            <  3:927497/144‑1 (MQ=255)
                                          aaaCAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGt                                                                                            >  4:927497/1‑144 (MQ=255)
                                          aaaCAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCa                                                                                        <  1:230706/148‑1 (MQ=255)
                                          aaaCAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCa                                                                                        >  2:230706/1‑148 (MQ=255)
                                           aaCAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTcc                                                                                              >  2:360118/1‑141 (MQ=255)
                                           aaCAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTcc                                                                                              <  1:360118/141‑1 (MQ=255)
                                                ggCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAAt                                                                                                        <  4:138415/126‑1 (MQ=255)
                                                ggCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAAt                                                                                                        >  3:138415/1‑126 (MQ=255)
                                                    tctGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATg                                                                                                                   <  3:188401/111‑1 (MQ=255)
                                                    tatGCCATCGTCCATGCGCTGATATAATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCACCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATg                                                                                                                   >  4:188401/3‑111 (MQ=255)
                                                        ccATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCaa                                                                          >  1:62909/1‑148 (MQ=255)
                                                              tCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTAt                                                                    <  2:817376/148‑1 (MQ=255)
                                                               ccATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATg                                                                   <  1:231198/148‑1 (MQ=255)
                                                                  tGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATAcc                                                                                                     >  4:254727/1‑111 (MQ=255)
                                                                  tGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATAcc                                                                                                     <  3:254727/111‑1 (MQ=255)
                                                                  tGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCa                                                                <  1:517013/148‑1 (MQ=255)
                                                                       tGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCgatgt                                                                                                             >  2:816633‑M2/1‑93 (MQ=255)
                                                                       tGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCgatgt                                                                                                             <  1:816633‑M2/98‑6 (MQ=255)
                                                                        gATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCgatgta                                                                                                            <  2:878225‑M2/98‑7 (MQ=255)
                                                                        gATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCgatgta                                                                                                            >  1:878225‑M2/1‑92 (MQ=255)
                                                                             cATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGc                                                                                                                  >  2:553770/1‑87 (MQ=255)
                                                                             cATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGc                                                                                                                  <  1:553770/87‑1 (MQ=255)
                                                                             cATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAg                                                     <  2:62909/148‑1 (MQ=255)
                                                                                gCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACa                                                                                                          <  1:262765/92‑1 (MQ=255)
                                                                                gCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACa                                                                                                          >  2:262765/1‑92 (MQ=255)
                                                                                  tGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCa                                                                                                                     >  2:444288/1‑79 (MQ=255)
                                                                                  tGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCa                                                                                                                     <  1:444288/79‑1 (MQ=255)
                                                                                    aaTATAAGCCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTc                                                                                 >  3:1050947/1‑113 (MQ=255)
                                                                                    aaTATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTc                                                                                 <  4:1050947/113‑1 (MQ=255)
                                                                                      tataAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCt                                                                                                                                 >  1:1098556/1‑63 (MQ=255)
                                                                                      tataAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCt                                                                                                                                 <  2:1098556/63‑1 (MQ=255)
                                                                                        taAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAgg                                                                        >  4:1051094/1‑118 (MQ=255)
                                                                                        taAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAgg                                                                        <  3:1051094/118‑1 (MQ=255)
                                                                                         aaaCCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTccc                                                                               >  3:1094968/1‑110 (MQ=255)
                                                                                         aaaCCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTccc                                                                               <  4:1094968/110‑1 (MQ=255)
                                                                                           aCCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGAc                                                   <  4:37953/136‑1 (MQ=255)
                                                                                           aCCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGAc                                                   >  3:37953/1‑136 (MQ=255)
                                                                                           aCCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGttttt                                       >  1:5488/1‑148 (MQ=255)
                                                                                           aCCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGttttt                                       >  3:532298/1‑148 (MQ=255)
                                                                                            ccGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTc                                                                                               <  2:355135/91‑1 (MQ=255)
                                                                                            ccGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTc                                                                                               >  1:355135/1‑91 (MQ=255)
                                                                                                     cGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGTTTTTTCTGGTGGCg                             >  4:67564/1‑148 (MQ=255)
                                                                                                       gTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCaa                                                                                       >  1:186363/1‑88 (MQ=255)
                                                                                                       gTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCaa                                                                                       <  2:186363/88‑1 (MQ=255)
                                                                                                       gTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGTTTTTTCTGGTGGCGGa                           <  4:532298/148‑1 (MQ=255)
                                                                                                           gctgctCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAAt                                                              <  2:421316/109‑1 (MQ=255)
                                                                                                           gctgctCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAAt                                                              >  1:421316/1‑109 (MQ=255)
                                                                                                             tgctCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGTTTTTTCTGGTGGCGGATaaaaa                     <  2:5488/148‑1 (MQ=255)
                                                                                                              gctCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCgcatgccgttctacga                                                                                                                   >  4:884879‑M1/1‑37 (MQ=255)
                                                                                                              gctCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCgcatgccgttctacga                                                                                                                   <  3:884879‑M1/53‑17 (MQ=255)
                                                                                                                     cgcCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGttt                                         >  4:591788/1‑120 (MQ=255)
                                                                                                                     cgcCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGttt                                         <  3:591788/120‑1 (MQ=255)
                                                                                                                          cGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGtt                                                       <  4:113728/101‑1 (MQ=255)
                                                                                                                          cGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGtt                                                       >  3:113728/1‑101 (MQ=255)
                                                                                                                           gCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTa                                                                     >  3:474801/1‑86 (MQ=255)
                                                                                                                           gCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTa                                                                     <  4:474801/86‑1 (MQ=255)
                                                                                                                                       ctctTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGtt                                                                      <  2:7862/73‑1 (MQ=255)
                                                                                                                                       ctctTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGtt                                                                      >  1:7862/1‑73 (MQ=255)
                                                                                                                                         ctTTTACATCCTCGTAGAACGGCATGCgatgtaaaagagatgccgctcggcgaggcgctggagcagcataccggcgttccggtttatattcagcatgatatcagcgcatggacgatggcagaggccttgtttg        <  3:504271‑M2/133‑107 (MQ=255)
                                                                                                                                         ctTTTACATCCTCGTAGAACGGCATGCgatgtaaaagagatgccgctcggcgaggcgctggagcagcataccggcgttccggtttatattcagcatgatatcagcgcatggacgatggcagaggccttgtttg        >  4:504271‑M2/1‑27 (MQ=255)
                                                                                                                                         ctTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCaata                                                                                     <  4:192800/56‑1 (MQ=255)
                                                                                                                                         ctTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCaata                                                                                     >  3:192800/1‑56 (MQ=255)
                                                                                                                                         ctTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGtt                                                       <  1:534396/86‑1 (MQ=255)
                                                                                                                                         ctTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGtt                                                       >  2:534396/1‑86 (MQ=255)
                                                                                                                                           tttACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTa                                                                     >  3:3307/1‑70 (MQ=255)
                                                                                                                                           tttACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTa                                                                     <  4:3307/70‑1 (MQ=255)
                                                                                                                                           tttACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGTTTTTTCTGGTGGCGGATAAAAAACt                  >  1:612148/1‑121 (MQ=255)
                                                                                                                                           tttACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGTTTTTTCTGGTGGCGGATAAAAAACt                  <  2:612148/121‑1 (MQ=255)
                                                                                                                                             tACATCgcatgccgttctacgaggatgtaaaagagatgccgctcggcgaggcgctggagcagcataccggcgttccggtttatattcagcatgatatc                                       >  1:878225‑M1/1‑6 (MQ=255)
                                                                                                                                             tACATCgcatgccgttctacgaggatgtaaaagagatgccgctcggcgaggcgctggagcagcataccggcgttccggtttatattcagcatgatatc                                       <  2:878225‑M1/98‑93 (MQ=255)
                                                                                                                                              aCATCgcatgccgttctacgaggatgtaaaagagatgccgctcggcgaggcgctggagcagcataccggcgttccggtttatattcagcatgatatca                                      <  1:816633‑M1/98‑94 (MQ=255)
                                                                                                                                              aCATCgcatgccgttctacgaggatgtaaaagagatgccgctcggcgaggcgctggagcagcataccggcgttccggtttatattcagcatgatatca                                      >  2:816633‑M1/1‑5 (MQ=255)
                                                                                                                                               cATCgcatgccgttctacgaggatgtaaaagagatgccgctcggcgaggcgctggagcagcataccggcgttccggtttatattcagcatgatatcagcgcatggacgatggcagaggccttgtttgg       <  2:232854‑M1/128‑125 (MQ=255)
                                                                                                                                               cATCgcatgccgttctacgaggatgtaaaagagatgccgctcggcgaggcgctggagcagcataccggcgttccggtttatattcagcatgatatcagcgcatggacgatggcagaggccttgtttgg       >  1:232854‑M1/1‑4 (MQ=255)
                                                                                                                                                 tCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGtttt                                        <  1:878999/93‑1 (MQ=255)
                                                                                                                                                 tCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGtttt                                        >  2:878999/1‑93 (MQ=255)
                                                                                                                                                 tCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGTTTTTTCTGGTGGCGGATAAAAAACTGATCGATATGGGAaat  <  3:112626/131‑1 (MQ=255)
                                                                                                                                                 tCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGTTTTTTCTGGTGGCGGATAAAAAACTGATCGATATGGGAaat  >  4:112626/1‑131 (MQ=255)
                                                                                                                                                  |                                                                                                                                 
GATAACCACCTGAATCACATCGCGCGCCCCGCGTGAGGCACCAAACAAGGCCTCTGCCATCGTCCATGCGCTGATATCATGCTGAATATAAACCGGAACGCCGGTATGCTGCTCCAGCGCCTCGCCGAGCGGCATCTCTTTTACATCCTCGTAGAACGGCATGCGATGTACAATACCATTTTCCGTATCAATAATTCCCGGCAAGGTTATGGCAATCGAAGTTAGACGCTCAAGTTTTTTCTGGTGGCGGATAAAAAACTGATCGATATGGGAAAT  >  NC_000913/1667905‑1668180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.