BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1745893 =	90 (0.960)	8 (0.090)	8/182	NT	9.1%	coding (235/1257 nt)	ydhQ	autotransporter adhesin‑related protein
*	?	NC_000913	1745928 =	77 (0.910)	8 (0.090)	8/182	NT	9.1%	coding (200/1257 nt)	ydhQ	autotransporter adhesin‑related protein

Only 100 of 115 total aligned reads displayed.

TACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTC  >  NC_000913/1745747‑1746040

accggcgaggtcattggcgcgacgcaacttactgaaggcgagttgattgttgaagctggcggaagagccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCa                                                                                                                                                    <  2:1077677‑M1/2‑1 (MQ=255)

accggcgaggtcattggcgcgacgcaacttactgaaggcgagttgattgttgaagctggcggaagagccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCa                                                                                                                                                    <  2:1044137‑M1/2‑1 (MQ=255)

 acacGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCaa                                                                                                                                                   <  1:343881/148‑1 (MQ=255)

 acacGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACCGAACAATATCTGTGGCaa                                                                                                                                                   <  4:718103/148‑1 (MQ=255)

               gCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTg                                                                                                                                     >  3:1096304/1‑148 (MQ=255)

               gCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTg                                                                                                                                     <  4:1096304/148‑1 (MQ=255)

                ccATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGa                                                                                                                                    >  4:755753/1‑148 (MQ=255)

                 cATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGAc                                                                                                                                   <  3:755753/148‑1 (MQ=255)

                  aTTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCa                                                                                                                                              <  2:365007/136‑1 (MQ=255)

                  aTTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCa                                                                                                                                              >  1:365007/1‑136 (MQ=255)

                     acgcaacttactgaaggcgagttgattgttgaagctggcggaagagccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCAATGGCACCATCGCTGACCGAt                                                                                                                               >  2:455981‑M1/126‑148 (MQ=255)

                            aacaaACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGc                                                                                                                        <  3:1096760/148‑1 (MQ=255)

                               aaaCCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCAt                                                                                                                     <  3:215521/148‑1 (MQ=255)

                                 gaaggcgagttgattgttgaagctggcggaagagccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCaa                                                                                                                                                   <  4:970487‑M1/3‑1 (MQ=255)

                                 gaaggcgagttgattgttgaagctggcggaagagccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCaa                                                                                                                                                   >  3:970487‑M1/114‑116 (MQ=255)

                                 gaaggcgagttgattgttgaagctggcggaagagccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCAATGGCACCATCGCTGACCGATAGCGTGCCATTg                                                                                                                   >  1:223549‑M1/114‑148 (MQ=255)

                                         cATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCaa                                                                                                                                                   <  1:804954/108‑1 (MQ=255)

                                         cATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCaa                                                                                                                                                   >  2:804954/1‑108 (MQ=255)

                                          aTAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTAc                                                                                                          >  4:878302/1‑148 (MQ=255)

                                            aaCCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGa                                                                                                                                    <  3:896914/120‑1 (MQ=255)

                                            aaCCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGa                                                                                                                                    >  4:896914/1‑120 (MQ=255)

                                               cTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATg                                                                                                                                                 >  2:961542/1‑104 (MQ=255)

                                               cTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATg                                                                                                                                                 <  1:961542/104‑1 (MQ=255)

                                                tttATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACtgtgtg                                                                                                    >  2:594690/1‑148 (MQ=255)

                                                          cTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGa                                                                                          >  4:162778/1‑148 (MQ=255)

                                                            gAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATc                                                                                        <  3:878302/148‑1 (MQ=255)

                                                             aaTTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGAc                                                                                                                                   >  2:726520/1‑104 (MQ=255)

                                                             aaTTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGAc                                                                                                                                   <  1:726520/104‑1 (MQ=255)

                                                                 cACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTa                                                                                                           >  2:308689/1‑124 (MQ=255)

                                                                 cACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTa                                                                                                           <  1:308689/124‑1 (MQ=255)

                                                                  gccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCAATGGCACCATCGCTGACCGATAGCGTGCCAt                                                                                                                     >  1:175750‑M1/81‑113 (MQ=255)

                                                                  gccgaaaataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCAATGGCACCATCGCTGACCGATAGCGTGCCAt                                                                                                                     <  2:175750‑M1/33‑1 (MQ=255)

                                                                     ttCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGtt                                                                               >  1:82906/1‑148 (MQ=255)

                                                                      tCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTg                                                                              <  3:162778/148‑1 (MQ=255)

                                                                        aataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCAATGGCACCATCGCTGACCGATAGCGTg                                                                                                                         <  4:746473‑M1/29‑1 (MQ=255)

                                                                        aataccgtggtcacgggggctggctggttgaaagtggcaaccggtgggatcgccaaatgcacacagtacggtaaCAATGGCACCATCGCTGACCGATAGCGTg                                                                                                                         >  3:746473‑M1/75‑103 (MQ=255)

                                                                         ggATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAg                                                                                                                             <  2:130150/98‑1 (MQ=255)

                                                                           aTGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACtg                                                                                                        >  4:821614/1‑117 (MQ=255)

                                                                           aTGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACtg                                                                                                        <  3:821614/117‑1 (MQ=255)

                                                                                 gcCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCg                                                                                                                           >  1:818733/1‑92 (MQ=255)

                                                                                 gcCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCg                                                                                                                           <  2:818733/92‑1 (MQ=255)

                                                                                   cATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGt                                                                                <  4:1097878/133‑1 (MQ=255)

                                                                                          cGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTgg                                                                                             <  3:512683/113‑1 (MQ=255)

                                                                                            tAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGcccc                                                        >  2:516983/1‑148 (MQ=255)

                                                                                             agcgagcgTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGc                                                                                            <  4:41723/111‑1 (MQ=255)

                                                                                             agcgagcgTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGc                                                                                            >  3:41723/1‑111 (MQ=255)

                                                                                                gagcgTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATccc                                                                                      <  1:769435/114‑1 (MQ=255)

                                                                                                gagcgTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATccc                                                                                      >  2:769435/1‑114 (MQ=255)

                                                                                                     tAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCa                                                                     <  2:1050444/126‑1 (MQ=255)

                                                                                                     tAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCa                                                                     >  1:1050444/1‑126 (MQ=255)

                                                                                                       gagagaCTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGAt                                                                                         >  2:122475/1‑104 (MQ=255)

                                                                                                       gagagaCTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGAt                                                                                         <  3:120681/104‑1 (MQ=255)

                                                                                                       gagagaCTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGAt                                                                                         >  4:120681/1‑104 (MQ=255)

                                                                                                       gagagaCTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGAt                                                                                         <  1:122475/104‑1 (MQ=255)

                                                                                                        agagaCTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTg                                                                                              >  1:316502/1‑98 (MQ=255)

                                                                                                        agagaCTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGt                                            >  4:920900/1‑148 (MQ=255)

                                                                                                            gcaaccggtgggatcgccaaatgcacacagtacggtaaCAATGGCACCATCGCTGACCGATAGCGTGcc                                                                                                                       <  1:578759‑M1/31‑1 (MQ=255)

                                                                                                            aCTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCa                                                                           >  3:542958/1‑113 (MQ=255)

                                                                                                            aCTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCa                                                                           <  4:542958/113‑1 (MQ=255)

                                                                                                            aCTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCa                                                                           >  2:73481/1‑113 (MQ=255)

                                                                                                            aCTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCa                                                                           <  1:73481/113‑1 (MQ=255)

                                                                                                            aCTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAAccagcc                                                              <  1:460137/126‑1 (MQ=255)

                                                                                                            aCTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAAccagcc                                                              >  2:460137/1‑126 (MQ=255)

                                                                                                             cTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCg                                                                                                                           <  1:628291/64‑1 (MQ=255)

                                                                                                             cTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCg                                                                                                                           <  1:1001789/64‑1 (MQ=255)

                                                                                                             cTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCg                                                                                                                           >  2:628291/1‑64 (MQ=255)

                                                                                                             cTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCg                                                                                                                           >  2:1001789/1‑64 (MQ=255)

                                                                                                             cTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTAtt                                         <  2:944498/146‑1 (MQ=255)

                                                                                                             cTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTAtt                                         >  1:2043/1‑146 (MQ=255)

                                                                                                             cTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTAtt                                         >  1:944498/1‑146 (MQ=255)

                                                                                                             cTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTAtt                                         <  2:2043/146‑1 (MQ=255)

                                                                                                              tAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCagccagcc                                                          >  3:11508/1‑128 (MQ=255)

                                                                                                              tAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCagccagcc                                                          <  4:11508/128‑1 (MQ=255)

                                                                                                               aaTTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCAtt                                                                                                                    <  1:113521/69‑1 (MQ=255)

                                                                                                                aTTGCGCCTCCCTCGGACTGAACAATATCTGTTGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACtgtg                                                                                                      <  2:333787/82‑1 (MQ=255)

                                                                                                                  tGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACtgtg                                                                                                      <  3:780033/80‑1 (MQ=255)

                                                                                                                  tGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACtgtg                                                                                                      >  4:780033/1‑80 (MQ=255)

                                                                                                                  tGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACttt                                                                       <  4:648366/111‑1 (MQ=255)

                                                                                                                  tGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACttt                                                                       >  3:648366/1‑111 (MQ=255)

                                                                                                                     gcCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCAACGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACt                                                                         <  1:331168/106‑1 (MQ=255)

                                                                                                                     gcCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCAACGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACt                                                                         >  2:331168/1‑106 (MQ=255)

                                                                                                                        tccctcGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCa                                                                     >  3:522161/1‑107 (MQ=255)

                                                                                                                        tccctcGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCa                                                                     <  4:522161/107‑1 (MQ=255)

                                                                                                                           ctcGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTAt                                          >  3:590537/1‑131 (MQ=255)

                                                                                                                           ctcGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTAt                                          <  4:590537/131‑1 (MQ=255)

                                                                                                                           ctcGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCa                         >  2:885732/1‑148 (MQ=255)

                                                                                                                            tcGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAg                        <  2:9015/148‑1 (MQ=255)

                                                                                                                                   gAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTcaac                 >  1:1077677/1‑148 (MQ=255)

                                                                                                                                   gAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTcaac                 >  1:1044137/1‑148 (MQ=255)

                                                                                                                                     aCAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTcaacaa               <  1:516983/148‑1 (MQ=255)

                                                                                                                                      cAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGt                                                                                <  2:1125457/82‑1 (MQ=255)

                                                                                                                                      cAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGt                                                                                >  1:1125457/1‑82 (MQ=255)

                                                                                                                                        atatCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCaa                                                                    <  1:188396/92‑1 (MQ=255)

                                                                                                                                        atatCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCaa                                                                    >  2:188396/1‑92 (MQ=255)

                                                                                                                                         tatCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCaa           >  3:198031/1‑148 (MQ=255)

                                                                                                                                                ggCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGa                                                   <  4:17774/101‑1 (MQ=255)

                                                                                                                                                ggCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGa                                                   >  3:17774/1‑101 (MQ=255)

                                                                                                                                                  CAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCa            >  1:443043‑M1/1‑138 (MQ=255)

                                                                                                                                                  CAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCa            <  2:443043‑M1/138‑1 (MQ=255)

                                                                                                                                                  CAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTc  >  3:920900‑M1/1‑148 (MQ=255)

TACACGCAGGTTACCGCCATTTTCCAGCAACAAACCGCAGGCATAACCTTTATCAACGCTGAATTCACCTTCGGGATGGCGGCCATTAACCGTAGCGAGCGTAGAGAGACTAATTGCGCCTCCCTCGGACTGAACAATATCTGTGGCAATGGCACCATCGCTGACCGATAGCGTGCCATTGTTACCGTACTGTGTGCATTTGGCGATCCCACCGGTTGCCACTTTCAACCAGCCAGCCCCCGTGACCACGGTATTTTCGGCTCTTCCGCCAGCTTCAACAATCAACTCGCCTTC  >  NC_000913/1745747‑1746040

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.