BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2820286	113 (1.210)	7 (0.080)	6/190	NT	6.1%	coding (1726/2631 nt)	alaS	alanyl‑tRNA synthetase
*	?	NC_000913	= 2820304	108 (1.220)	7 (0.080)	6/190	NT	6.1%	coding (1708/2631 nt)	alaS	alanyl‑tRNA synthetase

Only 100 of 144 total aligned reads displayed.

ACGAATCTGTGTGTTCACCAGGTCTTCGACCGCACGAATCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCAAGTTTACCGATGTGACCAATCGCCTGGCC  >  NC_000913/2820149‑2820430

acgaATCTGTGTGTTCACCAGGTCTTCGACCGCACGAATCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGgtgcagcgca                                                                                                                                        >  2:1115553/1‑148 (MQ=255)

       tgtgtgTTCACCAGGTCTTCGACCGCACGAATCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGatgcacgctgcgctgcg                                                                                                                                 <  1:477465‑M1/148‑18 (MQ=255)

        gtgtgtTCACCAGGTCTTCGACCGCACGAATCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCAt                                                                                                                                >  2:190792/1‑148 (MQ=255)

           tgtTCACCAGGTCTTCGACCGCACGAATCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTG                                                                                                                                                  >  1:993116‑M1/1‑127 (MQ=255)

           tgtTCACCAGGTCTTCGACCGCACGAATCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTG                                                                                                                                                  <  2:993116‑M1/127‑1 (MQ=255)

                aCCAGGTCTTCGACCGCACGAATCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTg                                                                                                                                   >  1:96397/1‑137 (MQ=255)

                aCCAGGTCTTCGACCGCACGAATCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTg                                                                                                                                   <  2:96397/137‑1 (MQ=255)

                 ccAGGTCTTCGACCGCACGAATCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGt                                                                                                                       >  4:296278/1‑148 (MQ=255)

                  cAGGTCTTCGACCGCACGAATCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGt                                                                                                                                    >  3:378391/1‑134 (MQ=255)

                  cAGGTCTTCGACCGCACGAATCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGt                                                                                                                                    <  4:378391/134‑1 (MQ=255)

                     gTCTTCGACCGCACGAATCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGGGTACCCAGAACCTGGTGCAGCGCAGCGTGCATCAGGTGCGTTGCg                                                                                                                   <  1:1115553/148‑1 (MQ=255)

                                cACGAATCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAg                                                                                                        <  1:165588/148‑1 (MQ=255)

                                    aaTCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAg                                                                                                        <  3:122627/144‑1 (MQ=255)

                                    aaTCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAg                                                                                                        >  4:122627/1‑144 (MQ=255)

                                    aaTCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGa                                                                                                    >  4:1026424/1‑148 (MQ=255)

                                    aaTCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGa                                                                                                    >  2:132094/1‑148 (MQ=255)

                                    aaTCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGa                                                                                                    <  1:440837/148‑1 (MQ=255)

                                       ctctTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATa                                                                                                 >  2:745181/1‑148 (MQ=255)

                                         cttctGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACg                                                                                               <  2:315428/148‑1 (MQ=255)

                                          ttctGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACgg                                                                                              <  3:296278/148‑1 (MQ=255)

                                                 ttCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGc                                                                                                                    >  4:605935/1‑119 (MQ=255)

                                                 ttCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGc                                                                                                                    <  3:605935/119‑1 (MQ=255)

                                                    aTCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGcagcgcagcg                                                                                                                                     <  4:590568/99‑1 (MQ=255)

                                                    aTCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGcagcgcagcg                                                                                                                                     >  3:590568/1‑99 (MQ=255)

                                                    aTCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATAc                                                                                                <  3:487200/136‑1 (MQ=255)

                                                    aTCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATAc                                                                                                >  4:487200/1‑136 (MQ=255)

                                                     tCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATc                                                                                                                               >  1:621131‑M2/1‑103 (MQ=255)

                                                     tCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATc                                                                                                                               <  2:621131‑M2/104‑2 (MQ=255)

                                                        cTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGa                                                                                                    <  3:420370/128‑1 (MQ=255)

                                                        cTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGa                                                                                                    >  4:420370/1‑128 (MQ=255)

                                                          tCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCtcat                                                                              <  2:1086372/148‑1 (MQ=255)

                                                                   gagaAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGt                                                                                                               <  3:353462/106‑1 (MQ=255)

                                                                   gagaAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGt                                                                                                               >  4:353462/1‑106 (MQ=255)

                                                                   gagaAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAg                                                                     >  2:974026/1‑148 (MQ=255)

                                                                     gaAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGgcg                                                                                                                                               <  2:703986/72‑1 (MQ=255)

                                                                     gaAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGgcg                                                                                                                                               >  1:703986/1‑72 (MQ=255)

                                                                     gaAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGc                                                                                                                    <  1:1094312/99‑1 (MQ=255)

                                                                      aaGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCtca                                                                               >  2:1038060/1‑135 (MQ=255)

                                                                      aaGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCtca                                                                               <  1:1038060/135‑1 (MQ=255)

                                                                         tCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGa                                                                                                       <  2:835318/108‑1 (MQ=255)

                                                                         tCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGa                                                                                                       >  1:835318/1‑108 (MQ=255)

                                                                            aaGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCg                                                                                                                        <  4:519534/88‑1 (MQ=255)

                                                                            aaGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCg                                                                                                                        >  3:519534/1‑88 (MQ=255)

                                                                            aaGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGa                                                                                                       >  3:536801/1‑105 (MQ=255)

                                                                            aaGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGa                                                                                                       <  4:536801/105‑1 (MQ=255)

                                                                            aaGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGcgcg                                                                                         <  3:961263/119‑1 (MQ=255)

                                                                             aGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGa                                                                                                       >  4:1116790/1‑104 (MQ=255)

                                                                             aGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGa                                                                                                       >  2:943775/1‑104 (MQ=255)

                                                                             aGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGa                                                                                                       <  1:943775/104‑1 (MQ=255)

                                                                                    caCCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTg                                                                                                              <  3:413110/90‑1 (MQ=255)

                                                                                    caCCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTg                                                                                                              >  4:413110/1‑90 (MQ=255)

                                                                                        ttGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGa                                                                                                    >  1:1079255/1‑96 (MQ=255)

                                                                                        ttGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGa                                                                                                    <  2:1079255/96‑1 (MQ=255)

                                                                                            cGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGatgcacgctgcgctgcgcca                                                                                                                              <  4:798676‑M1/66‑21 (MQ=255)

                                                                                            cGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGatgcacgctgcgctgcgcca                                                                                                                              >  3:798676‑M1/1‑46 (MQ=255)

                                                                                            cGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCag                                            <  1:974026/148‑1 (MQ=255)

                                                                                              ttAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCtcat                                                                              <  3:623550/112‑1 (MQ=255)

                                                                                              ttAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCtcat                                                                              >  4:623550/1‑112 (MQ=255)

                                                                                              ttAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAAc                                                                          <  1:736554/116‑1 (MQ=255)

                                                                                               tAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGatgcacgctgcgctgcgccaggtt                                                                                                                          >  2:453608‑M1/1‑43 (MQ=255)

                                                                                                 aCCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCtcat                                                                              >  2:880269/1‑109 (MQ=255)

                                                                                                 aCCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCtcat                                                                              <  1:880269/109‑1 (MQ=255)

                                                                                                   cAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAAccc                                     >  3:1129973/1‑148 (MQ=255)

                                                                                                   cAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAAccc                                     >  3:243002/1‑148 (MQ=255)

                                                                                                    aGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCAGCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCg                                    >  4:550542/1‑148 (MQ=255)

                                                                                                         aCCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAg                                                                                    <  1:679026/95‑1 (MQ=255)

                                                                                                         aCCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAg                                                                                    >  2:679026/1‑95 (MQ=255)

                                                                                                          ccTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACggg                                                                                             >  4:466167/1‑85 (MQ=255)

                                                                                                          ccTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACggg                                                                                             <  3:466167/85‑1 (MQ=255)

                                                                                                          ccTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCaa                              >  4:961064/1‑148 (MQ=255)

                                                                                                          ccTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCaa                              <  3:86006/148‑1 (MQ=255)

                                                                                                           cTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGa                                                                                                    <  1:662652/77‑1 (MQ=255)

                                                                                                           cTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGa                                                                                                    >  2:662652/1‑77 (MQ=255)

                                                                                                            tttCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCAAGt                            >  1:136410/1‑148 (MQ=255)

                                                                                                               cTGCGATACATGAGTACCCAGAACCTGGCGCAGAGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCAGCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCAAGTTTa                         <  3:550542/148‑1 (MQ=255)

                                                                                                                 gCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACg                                                                                               >  2:439725/1‑76 (MQ=255)

                                                                                                                 gCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACg                                                                                               <  1:439725/76‑1 (MQ=255)

                                                                                                                   gATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCAAGTTTACCGa                     >  4:823965/1‑148 (MQ=255)

                                                                                                                      aCATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCAAGTTTACCGAtgt                  <  3:823965/148‑1 (MQ=255)

                                                                                                                       cATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCAAGTTTACCGAtgtg                 <  3:1089249/148‑1 (MQ=255)

                                                                                                                         tGAGTACTCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGgcg                                                                                           <  4:862405/72‑1 (MQ=255)

                                                                                                                         tGAGTACCCAGAACCT‑GCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCAAGTTTACCGATGTGAcc              >  4:816714/1‑148 (MQ=255)

                                                                                                                          gAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCag                                            >  1:41365/1‑118 (MQ=255)

                                                                                                                              aCCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCaa                                                                           >  1:1031607/1‑83 (MQ=255)

                                                                                                                                 cAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCAAGTTTACCGAtgtg                 >  4:164904/1‑138 (MQ=255)

                                                                                                                                   gAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCAAGTTTACCGa                     >  4:1095306/1‑132 (MQ=255)

                                                                                                                                   gAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCAAGTTTACCGa                     <  3:1095306/132‑1 (MQ=255)

                                                                                                                                    aaCCTGGCGCAGCGCAGCGTGCATcaggttctgggtactcatgtatcgcagaaaggttcactggtta                                                                                     <  1:453608‑M2/67‑44 (MQ=255)

                                                                                                                                    aaCCTGGCGCAGCGCAGCGTGCATcaggttctgggtactcatgtatcgcagaaaggttcactggtta                                                                                     >  2:453608‑M2/1‑24 (MQ=255)

                                                                                                                                       cTGatgcacgctgcgctgcgccaggttctgggtactcatgtatcgcagaaaggttcactggttaacgacaaggtgctgcgcttcgacttctcacacaacgaagcgatgaaaccagaagagattcgtgcggtcgaagacctggtgaac  >  1:668560‑M1/1‑3 (MQ=255)

                                                                                                                                       cTGatgcacgctgcgctgcgccaggttctgggtactcatgtatcgcagaaaggttcactggttaacgacaaggtgctgcgcttcgacttctcacacaacgaagcgatgaaaccagaagagattcgtgcggtcgaagacctggtgaac  <  2:668560‑M1/147‑145 (MQ=255)

                                                                                                                                        tGGCGCAGCGCAGCGTGCATcaggttctgggtactcatgtatcgcagaaaggttcactggttaacgacaaggtgctgcg                                                                     >  3:389107‑M2/1‑20 (MQ=255)

                                                                                                                                        tGGCGCAGCGCAGCGTGCATcaggttctgggtactcatgtatcgcagaaaggttcactggttaacg                                                                                  <  4:798676‑M2/66‑47 (MQ=255)

                                                                                                                                        tGGCGCAGCGCAGCGTGCATcaggttctgggtactcatgtatcgcagaaaggttcactggttaacg                                                                                  >  3:798676‑M2/1‑20 (MQ=255)

                                                                                                                                        tGGCGCAGCGCAGCGTGCATcaggttctgggtactcatgtatcgcagaaaagttcactggttaacgacaaggtgctgcg                                                                     <  4:389107‑M2/79‑60 (MQ=255)

                                                                                                                                        tGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTc                                              <  3:14750/102‑1 (MQ=255)

                                                                                                                                         ggCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCAAGTTTACCGATGTGACCa             >  4:451929/1‑134 (MQ=255)

                                                                                                                                         ggCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCAAGTTTACCGATGTGACCa             <  3:451929/134‑1 (MQ=255)

                                                                                                                                         gatgcacgctgcgctgcgccaggttctgggtactcatgtatcgcagaaaggttcactggttaacgacaaggtgctgcgcttcgacttctcacacaacgaagcga                                           >  1:621131‑M1/1‑1 (MQ=255)

                                                                                                                                         gatgcacgctgcgctgcgccaggttctgggtactcatgtatcgcagaaaggttcactggttaacgacaaggtgctgcgcttcgacttctcacacaacgaagcga                                           <  2:621131‑M1/104‑104 (MQ=255)

ACGAATCTGTGTGTTCACCAGGTCTTCGACCGCACGAATCTCTTCTGGTTTCATCGCTTCGTTGTGTGAGAAGTCGAAGCGCAGCACCTTGTCGTTAACCAGTGAACCTTTCTGCGATACATGAGTACCCAGAACCTGGCGCAGCGCAGCGTGCATCAGGTGCGTTGCGGAGTGATTCAGACGAATACGGGCGCGACGAGCCTCATCAACATCAGCCTGCACCGCGTCGCCCACTTTCAGAGAACCCGCAGCAAGTTTACCGATGTGACCAATCGCCTGGCC  >  NC_000913/2820149‑2820430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.