BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2858336	73 (0.780)	6 (0.070)	6/190	NT	8.0%	coding (1244/2562 nt)	mutS	methyl‑directed mismatch repair protein
*	?	NC_000913	= 2858358	68 (0.770)	6 (0.070)	6/190	NT	8.0%	coding (1266/2562 nt)	mutS	methyl‑directed mismatch repair protein

Only 100 of 108 total aligned reads displayed.

CCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAGCGTGAACGTACCGGCCTGGACACGCTGAA  >  NC_000913/2858190‑2858483

ccGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACAccg                                                                                                                                                    <  4:210777/148‑1 (MQ=255)

      aagcCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTg                                                                                                                                              <  4:276000/146‑1 (MQ=255)

          cACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGTTgg                                                                                                                                          >  3:622680/1‑148 (MQ=255)

                      cAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTg                                                                                                                              >  4:622680‑M2/1‑147 (MQ=255)

                      cAACTGCCGGAGCTGCGTGCACAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACAccgcc                                                                                                                                                  >  4:364915/1‑128 (MQ=255)

                      cAACTGCCGGAGCTGCGTGCACAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACAccgcc                                                                                                                                                  <  3:364915/128‑1 (MQ=255)

                           gCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTg                                                                                                                                           <  4:578729/130‑1 (MQ=255)

                                aGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTg                                                                                                                                              >  4:265144/1‑122 (MQ=255)

                                aGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTg                                                                                                                                              <  3:265144/122‑1 (MQ=255)

                                 gCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCa                                                                                                                   >  2:166531/1‑148 (MQ=255)

                                           cAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACgg                                                                                                                                >  2:469766/1‑125 (MQ=255)

                                           cAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACgg                                                                                                                                <  1:469766/125‑1 (MQ=255)

                                               tAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACggt                                                                                                                               >  4:614357/1‑122 (MQ=255)

                                               tAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACggt                                                                                                                               <  3:614357/122‑1 (MQ=255)

                                               tAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTg                                                                                                                              <  2:854169‑M2/123‑2 (MQ=255)

                                               tAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTg                                                                                                                              >  1:854169‑M2/1‑122 (MQ=255)

                                               tAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGa                                                                                                     <  4:752554/148‑1 (MQ=255)

                                               tAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGa                                                                                                     >  3:752554/1‑148 (MQ=255)

                                                  aaaCTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAaga                                                                                                  <  1:166531/148‑1 (MQ=255)

                                                       gTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCGATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTgg                                                                                             >  4:690691/1‑148 (MQ=255)

                                                       gTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCaccgtcgcgtaccagcaccggcggtgtg                                                                                                                         <  3:378557‑M1/120‑29 (MQ=255)

                                                       gTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCaccgtcgcgtaccagcaccggcggtgtg                                                                                                                         >  4:378557‑M1/1‑92 (MQ=255)

                                                        tCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGa                                                                                            >  3:456880/1‑148 (MQ=255)

                                                           aTAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCt                                                                                               >  4:421384/1‑142 (MQ=255)

                                                           aTAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCt                                                                                               <  3:421384/142‑1 (MQ=255)

                                                             aGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAg                                                                                        >  1:58333/1‑147 (MQ=255)

                                                             aGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAg                                                                                        <  2:58333/147‑1 (MQ=255)

                                                              gTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTg                                                                                      <  3:690691/148‑1 (MQ=255)

                                                                 cACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATc                                                                                                                 >  1:1003550/1‑118 (MQ=255)

                                                                 cACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATc                                                                                                                 <  2:1003550/118‑1 (MQ=255)

                                                                 cACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGgcg                                                                                   >  1:853298/1‑148 (MQ=255)

                                                                   ccGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTgg                                                                                                                             <  2:473567‑M2/104‑3 (MQ=255)

                                                                       tACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCgct                                                                             <  2:853298/148‑1 (MQ=255)

                                                                         cAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGa                                                                                                     >  2:943086/1‑122 (MQ=255)

                                                                             cgcTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGa                                                                                                     <  3:547652/118‑1 (MQ=255)

                                                                               cTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACAccgc                                                                                                                                                   >  3:295966/1‑70 (MQ=255)

                                                                               cTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACAccgc                                                                                                                                                   <  3:701135/70‑1 (MQ=255)

                                                                               cTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACAccgc                                                                                                                                                   <  4:295966/70‑1 (MQ=255)

                                                                               cTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTg                                                                                      <  4:610660/131‑1 (MQ=255)

                                                                               cTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTg                                                                                      >  3:610660/1‑131 (MQ=255)

                                                                               cTACGTGAGAAGATGGGCGAGTTTGCCCAGCTGCGCGATCTGCTGTAGCGAGCAATCATCGACACAccgc                                                                                                                                                   >  4:701135/1‑70 (MQ=255)

                                                                                        aagaTGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCg                                                            <  4:456880/148‑1 (MQ=255)

                                                                                          gaTGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGa                                                                       <  4:1087952/135‑1 (MQ=255)

                                                                                           aTGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTggt                                                                                                                            <  1:1109463‑M2/81‑4 (MQ=255)

                                                                                           aTGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTggt                                                                                                                            >  2:1109463‑M2/1‑78 (MQ=255)

                                                                                           aTGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAag                                                                                                   <  4:195093/106‑1 (MQ=255)

                                                                                           aTGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAag                                                                                                   >  3:195093/1‑106 (MQ=255)

                                                                                               gCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTgg                                                                                                                             <  3:972893‑M2/76‑3 (MQ=255)

                                                                                               gCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAag                                                                                                   <  1:144998/102‑1 (MQ=255)

                                                                                               gCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAag                                                                                                   >  2:144998/1‑102 (MQ=255)

                                                                                               gCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTAt                                                       <  1:634315/146‑1 (MQ=255)

                                                                                               gCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATAAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTAt                                                       >  2:634315/1‑146 (MQ=255)

                                                                                                cGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAg                                                                                        <  3:1115119/112‑1 (MQ=255)

                                                                                                 gAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCaccgtcgcgtaccagcac                                                                                                                                   >  4:351800‑M1/1‑50 (MQ=255)

                                                                                                 gAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCaccgtcgcgtaccagcac                                                                                                                                   <  3:351800‑M1/68‑19 (MQ=255)

                                                                                                          gAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTg                                                                                              >  3:893756/1‑96 (MQ=255)

                                                                                                          gAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTg                                                                                              <  4:893756/96‑1 (MQ=255)

                                                                                                          gAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGa                                                                                            >  1:929091/1‑98 (MQ=255)

                                                                                                          gAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGa                                                                                            <  2:929091/98‑1 (MQ=255)

                                                                                                           aGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGa                                         <  1:17377/148‑1 (MQ=255)

                                                                                                            gCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAg                                                                                        <  1:289672/100‑1 (MQ=255)

                                                                                                            gCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAg                                                                                        >  2:289672/1‑100 (MQ=255)

                                                                                                                     tCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGAc                                                                      <  1:222227/109‑1 (MQ=255)

                                                                                                                     tCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGAc                                                                      >  2:222227/1‑109 (MQ=255)

                                                                                                                      ctgctgGAGCGAGCAATCATCGACACACCaccgtcgcgtaccagcaccgg                                                                                                                                <  3:631486‑M1/50‑22 (MQ=255)

                                                                                                                      ctgctgGAGCGAGCAATCATCGACACACCaccgtcgcgtaccagcaccgg                                                                                                                                >  4:631486‑M1/1‑29 (MQ=255)

                                                                                                                      ctgctgGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATg                                                                                          <  1:105890/88‑1 (MQ=255)

                                                                                                                      ctgctgGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATg                                                                                          >  2:105890/1‑88 (MQ=255)

                                                                                                                        gctgGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAGCGt                            >  4:167840/1‑148 (MQ=255)

                                                                                                                           ggAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAg                                                                                        >  1:255451/1‑85 (MQ=255)

                                                                                                                           ggAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAg                                                                                        <  2:255451/85‑1 (MQ=255)

                                                                                                                              gcgagcAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAGCGTGAACGt                      <  3:167840/148‑1 (MQ=255)

                                                                                                                                 agcAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAGCGTGa                          >  3:87385/1‑141 (MQ=255)

                                                                                                                                 agcAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAGCGTGa                          <  4:87385/141‑1 (MQ=255)

                                                                                                                                  gcAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGa                                                                                                     >  1:52821/1‑65 (MQ=255)

                                                                                                                                     atcatcGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTgg                                                                                             >  2:828757/1‑70 (MQ=255)

                                                                                                                                     atcatcGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTgg                                                                                             <  1:828757/70‑1 (MQ=255)

                                                                                                                                     atcatcGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAg                               >  1:253828/1‑132 (MQ=255)

                                                                                                                                     atcatcGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAg                               <  2:253828/132‑1 (MQ=255)

                                                                                                                                     atcatcGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAGCGTGAACGTACCGGcc               >  3:374020/1‑148 (MQ=255)

                                                                                                                                        atcGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAGCGTGAACGTACCGGCCTgg            <  4:374020/148‑1 (MQ=255)

                                                                                                                                         tcGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTAt                                                       >  2:562876/1‑104 (MQ=255)

                                                                                                                                         tcGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTAt                                                       <  1:562876/104‑1 (MQ=255)

                                                                                                                                         tcGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAGCGTGAACGTACCGGCCTGGa           >  2:531749/1‑148 (MQ=255)

                                                                                                                                         tcGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAGCGTGAACGTACCGGCCTGGa           >  2:898766/1‑148 (MQ=255)

                                                                                                                                             cacacCGCCGGTGCTGGTACGCGACGGTggtgtgtcgatgattgctcgctccagcagatcgcgcagctcggcaaactcgcccatcttctcacgtagcgcctgtaccggtgcactatcgac                                   <  3:378557‑M2/120‑93 (MQ=255)

                                                                                                                                             cacacCGCCGGTGCTGGTACGCGACGGTggtgtgtcgatgattgctcgctccagcagatcgcgcagctcggcaaactcgcccatcttctcacgtagcgcctgtaccggtgcactatcgac                                   >  4:378557‑M2/1‑28 (MQ=255)

                                                                                                                                             cacacCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAGCGTGAACGTACCGGCCTGGACACg       <  1:898766/148‑1 (MQ=255)

                                                                                                                                             cacacCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAGCGTGAACGTACCGGCCTGGACACg       <  1:531749/148‑1 (MQ=255)

                                                                                                                                                accaccgtcgcgtaccagcaccggcggtgtgtcgatgattgctcgctccagcagatcgcgcagctcggcaaactcgcccat                                                                       >  2:1109463‑M1/1‑3 (MQ=255)

                                                                                                                                                accaccgtcgcgtaccagcaccggcggtgtgtcgatgattgctcgctccagcagatcgcgcagctcggcaaactcgcccat                                                                       <  1:1109463‑M1/81‑79 (MQ=255)

                                                                                                                                                 ccgccgGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAg                                                 <  1:851787/102‑1 (MQ=255)

                                                                                                                                                 ccgccgGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAg                                                 >  2:851787/1‑102 (MQ=255)

                                                                                                                                                 ccactgtcgcgtaccagcaccggcggtgtgtcgatgattgctcgctccagcagatcgcgcagctcggcaaactcgc                                                                           >  4:972893‑M1/1‑2 (MQ=255)

                                                                                                                                                 ccaccgtcgcgtaccagcaccggcggtgtgtcgatgattgctcgctccagcagatcgcgcagctcggcaaactcgcccatcttctcacgtagcgcctgtaccgg                                               >  1:473567‑M1/1‑2 (MQ=255)

                                                                                                                                                 ccaccgtcgcgtaccagcaccggcggtgtgtcgatgattgctcgctccagcagatcgcgcagctcggcaaactcgcccatcttctcacgtagcgcctgtaccgg                                               <  2:473567‑M1/104‑103 (MQ=255)

                                                                                                                                                 ccaccgtcgcgtaccagcaccggcggtgtgtcgatgattgctcgctccagcagatcgcgcagctcggcaaactcgc                                                                           <  3:972893‑M1/76‑75 (MQ=255)

                                                                                                                                                  caccgtcgcgtaccagcaccggcggtgtgtcgatgattgctcgctccagcagatcgcgcagctcggcaaactcgcccatcttctcacgtagcgcctgtaccggtgcactatcgacagtttctaactgcgcacgcagctccggcagttg  >  4:622680‑M1/1‑1 (MQ=255)

                                                                                                                                                  caccgtcgcgtaccagcaccggcggtgtgtcgatgattgctcgctccagcagatcgcgcagctcggcaaactcgcccatcttctcacgtagcgcctgtaccggtgcactatcgacagtttcta                           <  2:854169‑M1/123‑123 (MQ=255)

                                                                                                                                                  caccgtcgcgtaccagcaccggcggtgtgtcgatgattgctcgctccagcagatcgcgcagctcggcaaactcgcccatcttctcacgtagcgcctgtaccggtgcactatcgacagtttcta                           >  1:854169‑M1/1‑1 (MQ=255)

CCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAGCGTGAACGTACCGGCCTGGACACGCTGAA  >  NC_000913/2858190‑2858483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.