New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2950597NA (NA)4 (0.050) 4/180 NT NA intergenic (+24/+38) argA/recD amino acid N‑acetyltransferase and inactive acetylglutamate kinase/exonuclease V (RecBCD complex), alpha chain
?NC_000913 = 2950614 NA (NA)noncoding (2/14 nt) REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences

CAGTATTCACTGGTTCCAGGAACGTGGATTTACCCCAGTGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCGGCATACAGCGACAGACGGCGACGC  >  NC_000913/2950450‑2950743
                                                                                                                                                   |                                                                                                                                                  
cAGTATTCACTGGTTCCAGGAACGTGGATTTACCCCAGTGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGAC                                                                                                                                                    >  4:32843‑M1/1‑148 (MQ=255)
 aGTATTCACTGGTTCCAGGAACGTGGATTTACCCCAGTGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACa                                                                                                                                                   >  2:60073/1‑148 (MQ=255)
    aTTCACTGGTTCCAGGAACGTGGATTTACCCCAGTGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGc                                                                                                                                                >  4:913389/1‑148 (MQ=255)
       cACTGGTTCCAGGAACGTGGATTTACCCCAGTGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTa                                                                                                                                             <  3:845032/148‑1 (MQ=255)
       cACTGGTTCCAGGAACGTGGATTTACCCCAGTGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTa                                                                                                                                             <  3:32843/148‑1 (MQ=255)
              tCCAGGAACGTGGATTTACCCCAGTGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                                                                      <  1:94874/148‑1 (MQ=255)
                   gAACGTGGATTTACCCCAGTGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACgt                                                                                                                                 >  1:60073‑M2/1‑146 (MQ=255)
                        tGGATTTACCCCAGTGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAac                                                                                                                                           <  1:133553/133‑1 (MQ=255)
                        tGGATTTACCCCAGTGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAac                                                                                                                                           >  2:133553/1‑133 (MQ=255)
                            tttACCCCAGTGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCgg                                                                                                                        <  3:913389/148‑1 (MQ=255)
                                      tGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACg                                                                                                                >  2:183816/1‑146 (MQ=255)
                                      tGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACg                                                                                                                <  1:183816/146‑1 (MQ=255)
                                            ttGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTa                                                                                                                                             <  1:247884/111‑1 (MQ=255)
                                            ttGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTa                                                                                                                                             >  2:247884/1‑111 (MQ=255)
                                                tttACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                                                                      <  1:226428/114‑1 (MQ=255)
                                                tttACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                                                                      >  2:226428/1‑114 (MQ=255)
                                                      gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGa                                                                                                   >  2:505671/1‑143 (MQ=255)
                                                      gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGa                                                                                                   <  1:505671/143‑1 (MQ=255)
                                                         cGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACgtacgagtgttacgcatgtcgca                                                                                                                             <  4:1083152‑M1/114‑24 (MQ=255)
                                                         cGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACgtacgagtgttacgcatgtcgca                                                                                                                             >  3:1083152‑M1/1‑91 (MQ=255)
                                                            gagCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGAC                                                                                                                                                    <  4:555499‑M1/88‑1 (MQ=255)
                                                            gagCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGAC                                                                                                                                                    >  3:555499‑M1/1‑88 (MQ=255)
                                                                 aaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACgtacgagtgttacgcatgtcgcat                                                                                                                            <  2:632872‑M1/107‑25 (MQ=255)
                                                                 aaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACgtacgagtgttacgcatgtcgcat                                                                                                                            >  1:632872‑M1/1‑83 (MQ=255)
                                                                   aaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAg                                                                                 >  1:976976/1‑148 (MQ=255)
                                                                        gTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCAc                                                                            >  2:330895/1‑148 (MQ=255)
                                                                               aaCTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAaca                                                                                                                                          >  1:759482/1‑79 (MQ=255)
                                                                               aaCTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAaca                                                                                                                                          <  2:759482/79‑1 (MQ=255)
                                                                                aCTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGa                                                                                >  2:592384/1‑136 (MQ=255)
                                                                                aCTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGa                                                                                <  1:592384/136‑1 (MQ=255)
                                                                                        cGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTaa                                                                                              >  2:1063555/1‑114 (MQ=255)
                                                                                        cGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTaa                                                                                              <  1:1063555/114‑1 (MQ=255)
                                                                                          tAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGt                                                                                                               <  4:1036079/95‑1 (MQ=255)
                                                                                          tAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGt                                                                                                               >  3:1036079/1‑95 (MQ=255)
                                                                                              tCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCg                                                                                                      >  1:237711/1‑100 (MQ=255)
                                                                                              tCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCg                                                                                                      <  2:237711/100‑1 (MQ=255)
                                                                                               ccAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATg                                                                                                                                                 >  4:355167/1‑56 (MQ=255)
                                                                                               ccAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATg                                                                                                                                                 <  3:355167/56‑1 (MQ=255)
                                                                                               ccAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACg                                                            <  2:119950/141‑1 (MQ=255)
                                                                                               ccAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACg                                                            >  1:119950/1‑141 (MQ=255)
                                                                                               ccAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTg                                                        <  2:211272/145‑1 (MQ=255)
                                                                                               ccAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTg                                                        >  1:211272/1‑145 (MQ=255)
                                                                                                 aaaGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACgtcgcatc                                                                                                                           >  4:159820‑M2/1‑68 (MQ=255)
                                                                                                 aaaGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACgtcgcatc                                                                                                                           <  3:159820‑M2/76‑9 (MQ=255)
                                                                                                 aaaGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGAt                                                   >  2:722921/1‑148 (MQ=255)
                                                                                                  aaGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGAtt                                                  <  1:330895/148‑1 (MQ=255)
                                                                                                     tgtTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACg                                                                                                                <  3:511824/83‑1 (MQ=255)
                                                                                                     tgtTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACg                                                                                                                >  4:511824/1‑83 (MQ=255)
                                                                                                      gtTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACgtcgcatccg                                                                                                                         >  2:756911‑M2/1‑63 (MQ=255)
                                                                                                      gtTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACgtcgcatccg                                                                                                                         <  1:756911‑M2/73‑11 (MQ=255)
                                                                                                       ttGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTaa                                                                                              >  1:252060/1‑99 (MQ=255)
                                                                                                       ttGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTaa                                                                                              <  2:252060/99‑1 (MQ=255)
                                                                                                       ttGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGc                                             <  1:722921/148‑1 (MQ=255)
                                                                                                        tGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTAtt                                                                                                          <  2:115224/86‑1 (MQ=255)
                                                                                                        tGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTAtt                                                                                                          >  1:115224/1‑86 (MQ=255)
                                                                                                          aTGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGa                                                                                                   >  4:270409/1‑91 (MQ=255)
                                                                                                          aTGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGa                                                                                                   <  3:270409/91‑1 (MQ=255)
                                                                                                                gATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAatat                                    >  4:345424/1‑148 (MQ=255)
                                                                                                                           aGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGGACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCgg                         >  4:662874/1‑148 (MQ=255)
                                                                                                                             cGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTg                                                        >  4:1091613/1‑115 (MQ=255)
                                                                                                                             cGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTg                                                        <  3:1091613/115‑1 (MQ=255)
                                                                                                                             cGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGcc                                               >  1:1057045/1‑124 (MQ=255)
                                                                                                                             cGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGcc                                               <  2:1057045/124‑1 (MQ=255)
                                                                                                                                tGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAat                                      <  1:484480/130‑1 (MQ=255)
                                                                                                                                tGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAat                                      >  2:484480/1‑130 (MQ=255)
                                                                                                                                     aTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGt                                                               >  1:1041988/1‑100 (MQ=255)
                                                                                                                                     aTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGt                                                               <  2:1041988/100‑1 (MQ=255)
                                                                                                                                     aTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATc                           >  1:923510/1‑136 (MQ=255)
                                                                                                                                     aTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATc                           <  2:923510/136‑1 (MQ=255)
                                                                                                                                      tcgtcgGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCGGCATACAGCGAc              <  3:662874/148‑1 (MQ=255)
                                                                                                                                         tcgGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCGGCATACAGCGACAGa           <  3:345424/148‑1 (MQ=255)
                                                                                                                                          cgGATGCGACgtacgagtgttacgcatgtcgcatccgacgattttcatcgcttaccctaaatccgccatcaac                                                                                     >  2:756911‑M1/1‑10 (MQ=255)
                                                                                                                                          cgGATGCGACgtacgagtgttacgcatgtcgcatccgacgattttcatcgcttaccctaaatccgccatcaac                                                                                     <  1:756911‑M1/73‑64 (MQ=255)
                                                                                                                                            gATGCGACgtacgagtgttacgcatgtcgcatccgacgattttcatcgcttaccctaaatccgccatcaacacttt                                                                                >  4:159820‑M1/1‑8 (MQ=255)
                                                                                                                                            gATGCGACgtacgagtgttacgcatgtcgcatccgacgattttcatcgcttaccctaaatccgccatcaacacttt                                                                                <  3:159820‑M1/76‑69 (MQ=255)
                                                                                                                                             aTGCGACATGCGTAACACTCGTACgtcgcatccgacgattttcatcgcttaccctaaatccgccatcaacactttggatttacgctggtagttgtacaactgctttt                                                <  2:632872‑M2/107‑84 (MQ=255)
                                                                                                                                             aTGCGACATGCGTAACACTCGTACgtcgcatccgacgattttcatcgcttaccctaaatccgccatcaacactttggatttacgctggtagttgtacaactgctttt                                                >  1:632872‑M2/1‑24 (MQ=255)
                                                                                                                                              tGCGACATGCGTAACACTCGTACgtcgcatccgacgattttcatcgcttaccctaaatccgccatcaacactttggatttacgctggtagttgtacaactgctttttgctctcg                                        <  4:1083152‑M2/114‑92 (MQ=255)
                                                                                                                                              tGCGACATGCGTAACACTCGTACgtcgcatccgacgattttcatcgcttaccctaaatccgccatcaacactttggatttacgctggtagttgtacaactgctttttgctctcg                                        >  3:1083152‑M2/1‑23 (MQ=255)
                                                                                                                                                  aCgtacgagtgttacgcatgtcgcatccgacgattttcatcgcttaccctaaatccgccatcaacactttggatttacgctggtagttgtacaactgctttttgctctcgggcagtaaatcaatatccactggggtaaatccacgttc  >  1:60073‑M1/1‑2 (MQ=255)
                                                                                                                                                  aCATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCTCTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTa                                        >  4:988792/1‑110 (MQ=255)
                                                                                                                                                  aCATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTa                                        <  3:988792/110‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CAGTATTCACTGGTTCCAGGAACGTGGATTTACCCCAGTGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCGGCATACAGCGACAGACGGCGACGC  >  NC_000913/2950450‑2950743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.