New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3754859	76 (0.840)	4 (0.040)	4/192	NT	5.0%	intergenic (‑431/+114)	yiaW/aldB	DUF3302 family inner membrane protein/aldehyde dehydrogenase B
	?	NC_000913	= 3754941	NA (NA)					noncoding (82/82 nt)	REP270 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP270 (repetitive extragenic palindromic) element; contains 2 REP sequences

GGCCTGGTTCGCCCGCTCACCATCGAAACGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGCCCCAACGGTTTATCC  >  NC_000913/3754716‑3754997                                                                                                                                                |                                                                                                                                           ggCCTGGTTCGCCCGCTCACCATCGAAACGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCg                                                                                                                                        >  1:128980/1‑148 (MQ=255)  gCCTGGTTCGCCCGCTCACCATCGAAACGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCgg                                                                                                                                       <  2:846814/148‑1 (MQ=255)  gCCTGGTTCGCCCGCTCACCATCGAAACGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCgg                                                                                                                                       >  4:930433/1‑148 (MQ=255)     tGGTTCGCCCGCTCACCATCGAAACGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATg                                                                                                                                    <  4:510739/148‑1 (MQ=255)         tCGCCCGCTCACCATCGAAACGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATgcggc                                                                                                                                <  3:930433/148‑1 (MQ=255)            cccGCTCACCATCGAAACGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCgtg                                                                                                                             <  1:743607/148‑1 (MQ=255)                 tCACCATCGAAACGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAGCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGc                                                                                                                        <  2:128980/148‑1 (MQ=255)                       tCGAAACGCGAGATTAAACTCCTGACTAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTACGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATc                                                                                                                  >  3:761088/1‑148 (MQ=255)                       tCGAAACGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTACGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTagc                                                                                                                  <  4:761088/148‑3 (MQ=255)                           aaCGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATgc                                                                                                                                          <  3:585121‑M1/120‑3 (MQ=255)                           aaCGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATgc                                                                                                                                          >  4:585121‑M1/1‑118 (MQ=255)                           aaCGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACg                                                                                                                         <  3:278814/137‑1 (MQ=255)                           aaCGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACg                                                                                                                         <  3:83719/137‑1 (MQ=255)                           aaCGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACg                                                                                                                         >  4:278814/1‑137 (MQ=255)                           aaCGCGAGATTAAACTCATGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAAGAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACg                                                                                                                         >  4:83719/1‑137 (MQ=255)                                        aCTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATgcc                                                                                                                                         <  4:1099576‑M1/108‑4 (MQ=255)                                        aCTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCGGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATgcc                                                                                                                                         >  3:1099576‑M1/1‑105 (MQ=255)                                         cTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATgcggcg                                                                                                                               >  3:115060/1‑117 (MQ=255)                                         cTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATgcggcg                                                                                                                               <  4:115060/117‑1 (MQ=255)                                              gACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATgcgg                                                                                                                                 >  4:13195/1‑110 (MQ=255)                                              gACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATgcgg                                                                                                                                 <  3:13195/110‑1 (MQ=255)                                               aCAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGcc                                                                                                                       <  2:1062872/119‑1 (MQ=255)                                               aCAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGcc                                                                                                                       >  1:1062872/1‑119 (MQ=255)                                                cAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTa                                                                                                                    <  1:509070/121‑1 (MQ=255)                                                cAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTa                                                                                                                    >  2:509070/1‑121 (MQ=255)                                                  aaaCACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGcc                                                                                                                       <  3:192920/116‑1 (MQ=255)                                                  aaaCACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGcc                                                                                                                       >  4:192920/1‑116 (MQ=255)                                                          cccAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATgcctgatgcgacgcttacgcgtcttatcatgcctacgggaacctgaccgtaggccggataa                                                                               >  3:804333‑M1/1‑87 (MQ=255)                                                           ccAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCgt                                                                                                                              <  2:23709/100‑1 (MQ=255)                                                           ccAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCgt                                                                                                                              >  1:23709/1‑100 (MQ=255)                                                           ccAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCt                                                                                                                      >  3:65306/1‑108 (MQ=255)                                                           ccAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCt                                                                                                                      <  4:65306/108‑1 (MQ=255)                                                             aGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATAAGGCGTACACGccgcat                                                                                                                   >  4:3707/1‑105 (MQ=38)                                                             aGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATAAGGCGTACACGccgcat                                                                                                                   <  3:3707/109‑5 (MQ=38)                                                                 aCGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATgcggcg                                                                                                                               >  3:957299/1‑93 (MQ=255)                                                                 aCGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATgcggcg                                                                                                                               <  4:957299/93‑1 (MQ=255)                                                                  cGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCgtgt                                                                                                                            >  3:961060/1‑95 (MQ=255)                                                                  cGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCgtgt                                                                                                                            <  4:961060/95‑1 (MQ=255)                                                                        tCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGc                                                                                                                        <  2:646786/93‑1 (MQ=255)                                                                        tCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGc                                                                                                                        >  1:646786/1‑93 (MQ=255)                                                                         cTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATg                                                                                                                                    <  3:841465/80‑1 (MQ=255)                                                                         cTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATg                                                                                                                                    >  4:841465/1‑80 (MQ=255)                                                                          tGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATgcctgatgcgacgcttacgcgtcttatcatgcctacgggaacctgaccgtaggccggataaggcgtacacgccgcat                                                               <  4:804333‑M1/148‑78 (MQ=255)                                                                               gCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCAt                                                                                      >  2:511997/1‑120 (MQ=255)                                                                               gCGTAGTCTGGGTTATTGCGCACGTAGGTTGAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCAt                                                                                      <  1:511997/120‑1 (MQ=255)                                                                                        gggTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACg                                                                                                                         >  2:789027/1‑76 (MQ=255)                                                                                        gggTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACg                                                                                                                         <  1:789027/76‑1 (MQ=255)                                                                                          gTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGa                                                                                    <  3:399397/111‑1 (MQ=255)                                                                                          gTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGa                                                                                    >  4:399397/1‑111 (MQ=255)                                                                                           ttATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCa                                              >  3:264993/1‑148 (MQ=255)                                                                                               tGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCAt                                                                                      >  3:250310/1‑104 (MQ=255)                                                                                               tGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCAt                                                                                      <  4:250310/104‑1 (MQ=255)                                                                                                gcgcACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCg                                         <  4:264993/148‑1 (MQ=255)                                                                                                       tAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATaa                                                                                 >  2:780690/1‑101 (MQ=255)                                                                                                       tAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATaa                                                                                 <  1:780690/101‑1 (MQ=255)                                                                                                           tttAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGa                                                                               >  2:699383/1‑99 (MQ=255)                                                                                                           tttAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGa                                                                               <  1:699383/99‑1 (MQ=255)                                                                                                            ttAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAg                                                                                                    <  4:420745/77‑1 (MQ=255)                                                                                                            ttAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAg                                                                                                    >  3:420745/1‑77 (MQ=255)                                                                                                            ttAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATg                                                                                     <  2:227493/92‑1 (MQ=255)                                                                                                            ttAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATg                                                                                     >  1:227493/1‑92 (MQ=255)                                                                                                            ttAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGcttc                                >  2:1078506/1‑145 (MQ=255)                                                                                                            ttAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGcttc                                <  1:1078506/145‑1 (MQ=255)                                                                                                               aaaCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCa                                                                                       >  2:691920/1‑87 (MQ=255)                                                                                                               aaaCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCa                                                                                       <  1:691920/87‑1 (MQ=255)                                                                                                               aaaCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGAcgc                                                                            <  4:719009/98‑1 (MQ=255)                                                                                                               aaaCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGAagc                                                                            >  3:719009/1‑98 (MQ=255)                                                                                                                aaCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTa                                                                                                                           <  3:135726/50‑1 (MQ=255)                                                                                                                aaCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTa                                                                                                                           >  4:135726/1‑50 (MQ=255)                                                                                                                 aCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGa                                                                               <  1:1039006/93‑1 (MQ=255)                                                                                                                 aCGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGa                                                                               >  2:1039006/1‑93 (MQ=255)                                                                                                                  cGTAAATTGTAACAACGTGCGCTTTGTTTATgcctgatgcgacgcttacgcgtcttatcatgcctacgggaacctgaccgtaggccggataaggcgtacacgc                                                                    >  1:1025939‑M1/1‑31 (MQ=255)                                                                                                                  cGTAAATTGTAACAACGTGCGCTTTGTTTATgcctgatgcgacgcttacgcgtcttatcatgcctacgggaacctgaccgtaggccggataaggcgtacacgc                                                                    <  2:1025939‑M1/103‑73 (MQ=255)                                                                                                                     aaaTTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTAc                                                                                                          <  4:249055/62‑1 (MQ=255)                                                                                                                     aaaTTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTAc                                                                                                          >  3:249055/1‑62 (MQ=255)                                                                                                                        ttGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTa                                                                                                                    <  3:965670/49‑1 (MQ=255)                                                                                                                        ttGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTa                                                                                                                    >  4:965670/1‑49 (MQ=255)                                                                                                                        ttGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGa                                                                               >  3:634292/1‑86 (MQ=255)                                                                                                                        ttGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGa                                                                               <  4:634292/86‑1 (MQ=255)                                                                                                                          gTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAg                  >  4:182200/1‑145 (MQ=255)                                                                                                                          gTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAg                  <  3:182200/145‑1 (MQ=255)                                                                                                                             acaacGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTAc                                                                                                          >  2:1092522/1‑54 (MQ=255)                                                                                                                             acaacGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTAc                                                                                                          <  1:1092522/54‑1 (MQ=255)                                                                                                                              caacGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCa                                                                >  2:165165/1‑95 (MQ=255)                                                                                                                              caacGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCa                                                                <  1:165165/95‑1 (MQ=255)                                                                                                                                acGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGAcc                                      <  4:748245/119‑1 (MQ=255)                                                                                                                                acGTGCGCTTAGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACGCAATGCGAcc                                      >  3:748245/1‑119 (MQ=255)                                                                                                                                       cTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGCCCCAACGGTTTATcc  >  1:617674/1‑148 (MQ=255)                                                                                                                                         ttGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGct                                  <  2:685584/114‑1 (MQ=255)                                                                                                                                         ttGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGct                                  >  1:685584/1‑114 (MQ=255)                                                                                                                                                |                                                                                                                                           GGCCTGGTTCGCCCGCTCACCATCGAAACGCGAGATTAAACTCCTGACAAAACACGCCCCAGAAACGTACTTCTGTTGGCGTAGTCTGGGTTATTGCGCACGTAGGTTTAAAACGTAAATTGTAACAACGTGCGCTTTGTTTATGCCGGATGCGGCGTGTACGCCTTATCCGGCCTACGGTCAGGTTCCCGTAGGCATGATAAGACGCGTAAGCGTCGCATCAGGCAATGAATACCCAATGCGACCAGCTTCTTATATCAGAACAGCCCCAACGGTTTATCC  >  NC_000913/3754716‑3754997

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.