BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3817574 =	169 (1.810)	11 (0.130)	8/182	NT	6.4%	intergenic (+35/‑186)	yicC/dinD	UPF0701 family protein/DNA damage‑inducible protein
*	?	NC_000913	3817604 =	169 (1.990)	11 (0.130)	8/182	NT	6.4%	intergenic (+65/‑156)	yicC/dinD	UPF0701 family protein/DNA damage‑inducible protein

Only 100 of 238 total aligned reads displayed.

GAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGA  >  NC_000913/3817429‑3817721

gAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACaaa                                                                                                                                                   <  2:53611/148‑1 (MQ=255)

     tatcaattgcaaagaaagtaaatctgtaactgtatttatatacagttgtgagtatctcacgttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAATgccg                                                                                                                                              <  2:2907‑M1/8‑1 (MQ=255)

          ctctTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACt                                                                                                                                         <  3:456286/148‑1 (MQ=255)

            ctTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCa                                                                                                                                           >  1:581347/1‑144 (MQ=255)

            ctTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACt                                                                                                                                         <  2:216742/146‑1 (MQ=255)

            ctTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACt                                                                                                                                         >  1:216742/1‑146 (MQ=255)

                  tCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACaga                                                                                                                                 <  4:81381/148‑1 (MQ=255)

                  gaaagtaaatctgtaactgtatttatatacagttgtgagtatctcacgttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaaa                                                                                                                                                    >  4:693192‑M1/128‑129 (MQ=255)

                  gaaagtaaatctgtaactgtatttatatacagttgtgagtatctcacgttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaaa                                                                                                                                                    <  3:693192‑M1/2‑1 (MQ=255)

                        aaatctgtaactgtatttatatacagttgtgagtatctcacgttctcagtgtgctgggcaaaaaaacatcgcaaaagctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAATgc                                                                                                                                                >  1:97263‑M1/122‑127 (MQ=255)

                           tctgtaactgtatttatatacagttgtgagtatctcacgttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAATGCCGCCACTCAAACAGAGCGGCAttt                                                                                                                        >  3:440322‑M1/119‑148 (MQ=255)

                             cAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCAttttt                                                                                                                      >  2:235750/1‑148 (MQ=255)

                             cAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCAttttt                                                                                                                      <  3:1022532/148‑1 (MQ=255)

                                aactgtatttatatacagttgtgagtatctcacgttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAATgccg                                                                                                                                              <  4:235984‑M1/8‑1 (MQ=255)

                                     aaGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCaa                                                                                                                                      >  4:544/1‑124 (MQ=255)

                                     aaGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCaa                                                                                                                                      <  3:544/124‑1 (MQ=255)

                                      aGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGc                                                                                                             >  2:13095/1‑148 (MQ=255)

                                             aaCTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATg                                                                                                                                                 >  4:1135069/1‑105 (MQ=255)

                                             aaCTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTttc                                                                                                                     <  4:429030/133‑1 (MQ=255)

                                               cagttgtgagtatctcacgttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAATGCCGCCACTCAAACAGAGCGGCAttt                                                                                                                        >  4:1077819‑M1/99‑128 (MQ=255)

                                                  cGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATgc                                                                                                                                                <  2:678209/101‑1 (MQ=255)

                                                     cATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGt                                                                                              <  1:13095/148‑1 (MQ=255)

                                                       tCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACagag                                                                                                                                <  2:742506/112‑1 (MQ=255)

                                                                aaGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCAttttt                                                                                                                      >  3:1112683/1‑113 (MQ=255)

                                                                  ttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAATgccg                                                                                                                                              >  3:756480‑M1/80‑87 (MQ=255)

                                                                  ttctcagtgtgctgggcaaaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAATgccg                                                                                                                                              <  4:756480‑M1/8‑1 (MQ=255)

                                                                    gtTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACaaa                                                                                                                                                   <  2:946521/80‑1 (MQ=255)

                                                                        attgaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACaaa                                                                                                                                                   >  2:371219/1‑76 (MQ=255)

                                                                        attgaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACaaa                                                                                                                                                   <  1:371219/76‑1 (MQ=255)

                                                                        attgaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTttcttc                                                                                                                  >  1:89190/1‑109 (MQ=255)

                                                                         ttgaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTGCTTTTCCGCCTTCACAAATGCAGCCACTCAAACAGAGCGGCATTTTTCTTCCCCCCCACATTCAATTCTGTTTTGCGTGCCGGCTCCAGAt                                                                          >  4:863227/1‑148 (MQ=255)

                                                                         ttgaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTttct                                                                                                                    <  3:123016/106‑1 (MQ=255)

                                                                          tgaGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACAt                                                                                                        <  1:705885/117‑1 (MQ=255)

                                                                              cAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGc                                                                                 >  4:941586/1‑136 (MQ=255)

                                                                              cAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGc                                                                                 <  3:941586/136‑1 (MQ=255)

                                                                              cAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGc                                                                     >  2:994903/1‑148 (MQ=255)

                                                                                 aTGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATgccgcc                                                                                                                                            <  1:558690/74‑1 (MQ=255)

                                                                                  tGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCaa                                                                                                                                      <  4:441527/79‑1 (MQ=255)

                                                                                    cgcgAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCa                                                                                                     <  1:240273/110‑1 (MQ=255)

                                                                                    aaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaaa                                                                                                                                                    <  1:493649‑M1/2‑1 (MQ=255)

                                                                                    aaaaaacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaaa                                                                                                                                                    >  2:493649‑M1/62‑63 (MQ=255)

                                                                                      cgAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGtttt                                                             <  4:1041957/148‑1 (MQ=255)

                                                                                        aacatcgcaaaatctggagcaggcacgcaaaacagaattgaatgttgcggggaagaaAAATGCCGCCACTCAAACAGAGCGGCAtt                                                                                                                         <  3:177028‑M1/29‑1 (MQ=255)

                                                                                        aGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCa                                                                             >  2:401457/1‑130 (MQ=255)

                                                                                        aGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCa                                                                             <  1:573175/130‑1 (MQ=255)

                                                                                        aGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCa                                                                             <  1:401457/130‑1 (MQ=255)

                                                                                              ttCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACt                                                                                                                                         <  2:353422/64‑1 (MQ=255)

                                                                                              ttCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACt                                                                                                                                         >  1:353422/1‑64 (MQ=255)

                                                                                               tCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCa                                                                                                     <  2:1043574/99‑1 (MQ=255)

                                                                                               tCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCa                                                                                                     >  1:1043574/1‑99 (MQ=255)

                                                                                               tCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAAt                                                                                                   <  1:907668/101‑1 (MQ=255)

                                                                                                cAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGcc                                                                                    >  4:31800/1‑115 (MQ=255)

                                                                                                   aaCATCGAATAATTCGTAACGCCAATTCTTACTTTTCCGCCTTCAGAAATGCCGCCACTCAAAc                                                                                                                                    <  4:967089/64‑1 (MQ=255)

                                                                                                   aaCATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAAc                                                                                                                                    >  3:967089/1‑64 (MQ=255)

                                                                                                   aaCATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTg                                                                      <  2:83524/126‑1 (MQ=255)

                                                                                                      aTCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACAtt                                                                                                       >  4:1001871/1‑90 (MQ=255)

                                                                                                      aTCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTg                                             <  3:863227/148‑1 (MQ=255)

                                                                                                       tCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGt                                                                <  3:335057/128‑1 (MQ=255)

                                                                                                           aTAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGttt                                                              >  1:946514/1‑126 (MQ=255)

                                                                                                           aTAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGc                                                        <  2:929362/132‑1 (MQ=255)

                                                                                                           aTAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTg                                             <  2:452232/143‑1 (MQ=255)

                                                                                                           aTAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTg                                             >  1:452232/1‑143 (MQ=255)

                                                                                                           aTAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAAc                                        >  2:11535/1‑148 (MQ=255)

                                                                                                             aaCTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGtttttt                                                           <  1:763537/127‑1 (MQ=255)

                                                                                                              aCTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGtttttt                                                           >  3:121597/1‑126 (MQ=255)

                                                                                                              aCTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTg                                     <  1:11535/148‑1 (MQ=255)

                                                                                                              aCTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTg                                     <  1:673963/148‑1 (MQ=255)

                                                                                                                 cGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTg                                                                                          <  2:668562/92‑1 (MQ=255)

                                                                                                                  gTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTcccc                                                                                                               >  3:1065592/1‑70 (MQ=255)

                                                                                                                      cGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCaa                                                                                                                                      <  2:568526/43‑1 (MQ=255)

                                                                                                                      cGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCa                                                     <  3:246653/124‑1 (MQ=255)

                                                                                                                      cGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCacac                                               >  1:1084246/1‑130 (MQ=255)

                                                                                                                      cGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCacac                                               <  2:1084246/130‑1 (MQ=255)

                                                                                                                        ccAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCacac                                               >  3:622605/1‑128 (MQ=255)

                                                                                                                        ccAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCacac                                               <  4:622605/128‑1 (MQ=255)

                                                                                                                          aaTTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACaa                         <  3:884505/148‑1 (MQ=255)

                                                                                                                                tACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGtttt                                                             >  3:829959/1‑106 (MQ=255)

                                                                                                                                tACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGtttt                                                             <  4:829959/106‑1 (MQ=255)

                                                                                                                                tACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGtat                   >  1:2907/1‑148 (MQ=255)

                                                                                                                                   ttttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGt                                      <  2:90412/126‑1 (MQ=255)

                                                                                                                                   ttttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTg                                     <  4:125839/127‑1 (MQ=255)

                                                                                                                                    tttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATg                                                                 >  3:293600/1‑98 (MQ=255)

                                                                                                                                    tttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTcaca                          >  2:306660/1‑137 (MQ=255)

                                                                                                                                    tttCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTcaca                          <  1:306660/137‑1 (MQ=255)

                                                                                                                                          ccTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGttttt                                                            <  2:171188/97‑1 (MQ=255)

                                                                                                                                          ccTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGttttt                                                            >  1:171188/1‑97 (MQ=255)

                                                                                                                                          ccTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGtttt                                                             <  4:397328/96‑1 (MQ=255)

                                                                                                                                          ccTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGtttt                                                             >  3:397328/1‑96 (MQ=255)

                                                                                                                                          ccTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTg                                     <  2:576376/120‑1 (MQ=255)

                                                                                                                                           cTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACt                              <  2:1003049/126‑1 (MQ=255)

                                                                                                                                           cTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACt                              >  1:1003049/1‑126 (MQ=255)

                                                                                                                                           cTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGt        >  2:1034941/1‑148 (MQ=255)

                                                                                                                                            ttCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTgag                                   >  3:814361/1‑120 (MQ=255)

                                                                                                                                             tCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGtttt                                                             >  3:908499/1‑93 (MQ=255)

                                                                                                                                              cacaAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAg                                                    <  4:894664/101‑1 (MQ=255)

                                                                                                                                              cacaAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTc                             <  4:122256/124‑1 (MQ=255)

                                                                                                                                                caAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTg                                     <  4:29183/114‑1 (MQ=255)

                                                                                                                                                 AAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGa                                                                   <  1:1019147‑M1/83‑1 (MQ=255)

                                                                                                                                                 AAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTgag                                   >  3:120872‑M1/1‑115 (MQ=255)

                                                                                                                                                 AAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTgag                                   <  4:120872‑M1/115‑1 (MQ=255)

GAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAACTCGTAACGCCAATTCTTACTTTTCCGCCTTCACAAATGCCGCCACTCAAACAGAGCGGCATTTTTCTTCCCCGCAACATTCAATTCTGTTTTGCGTGCCTGCTCCAGATTTTGCGATGTTTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGA  >  NC_000913/3817429‑3817721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.