New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 419059951 (0.550)6 (0.070) 5/180 NT 11.2% intergenic (‑112/+136) sroH/thiH novel sRNA, function unknown/tyrosine lyase, involved in thiamine‑thiazole moiety synthesis
?NC_000913 = 4190612 49 (0.580)intergenic (‑125/+123) sroH/thiH novel sRNA, function unknown/tyrosine lyase, involved in thiamine‑thiazole moiety synthesis

GTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTC  >  NC_000913/4190476‑4190736
                                                                                                                           |                                                                                                                                         
gtTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTttt                                                                                                                           <  4:481450‑M2/140‑4 (MQ=255)
gtTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTttt                                                                                                                           >  3:481450‑M2/1‑137 (MQ=255)
  tCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAgg                                                                                                                                      >  2:756593/1‑127 (MQ=255)
  tCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAgg                                                                                                                                      <  1:756593/127‑1 (MQ=255)
  tCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGac                                                                                                                 >  3:412543/1‑148 (MQ=255)
     tATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGacaac                                                                                                              <  4:412543/148‑1 (MQ=255)
         ttCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGa                                                                                                                                        <  1:350416/118‑1 (MQ=255)
         ttCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGa                                                                                                                                        >  2:350416/1‑118 (MQ=255)
           cGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGa                                                                                                                                        >  4:332694/1‑116 (MQ=255)
           cGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGa                                                                                                                                        <  3:332694/116‑1 (MQ=255)
              ctctATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGacaaca                                                                                                             <  4:497299/140‑1 (MQ=255)
              ctctATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGacaaca                                                                                                             >  3:497299/1‑140 (MQ=255)
                   tCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTt                                                                                                                             >  3:43170‑M2/1‑118 (MQ=255)
                   tCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTt                                                                                                                             <  4:43170‑M2/119‑2 (MQ=255)
                    cATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGa                                                                                                                                        <  1:771155/107‑1 (MQ=255)
                    cATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGa                                                                                                                                        >  2:771155/1‑107 (MQ=255)
                     aTAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAg                                                                                                                                       >  1:346564/1‑107 (MQ=255)
                     aTAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAg                                                                                                                                       <  2:346564/107‑1 (MQ=255)
                             gTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGgaag                                                                                                                                   >  4:101965/1‑103 (MQ=255)
                             gTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGgaag                                                                                                                                   <  3:101965/103‑1 (MQ=255)
                                   aCTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATaaaaaaa                                                                                >  2:659924/1‑148 (MQ=255)
                                     tctctTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAaca                                                                              <  1:659924/148‑1 (MQ=255)
                                        ctTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTtttcgccc                                                                                                                      <  3:419565‑M2/105‑9 (MQ=255)
                                        ctTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTtttcgccc                                                                                                                      >  4:419565‑M2/1‑97 (MQ=255)
                                           aCAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCa                                                                                              >  3:265601/1‑126 (MQ=255)
                                           aCAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCa                                                                                              <  4:265601/126‑1 (MQ=255)
                                              aTCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAAagcttcttcctcgtttcgccc                                                                                                                      >  4:529936‑M1/1‑78 (MQ=255)
                                              aTCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAAagcttcttcctcgtttcgccc                                                                                                                      <  3:529936‑M1/99‑22 (MQ=255)
                                              aTCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAAagcttcttcctcgtttcgcc                                                                                                                       >  2:154317‑M1/1‑78 (MQ=255)
                                              aTCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAAagcttcttcctcgtttcgcc                                                                                                                       <  1:154317‑M1/98‑21 (MQ=255)
                                                cAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAAagcttcttc                                                                                                                                  >  3:234492‑M1/1‑76 (MQ=255)
                                                cAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAAagcttcttc                                                                                                                                  <  4:234492‑M1/85‑10 (MQ=255)
                                                    tctcTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAgg                                                                                                                                      <  1:702475/77‑1 (MQ=255)
                                                    tctcTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAgg                                                                                                                                      >  2:702475/1‑77 (MQ=255)
                                                    tctcTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCt                                                                                                                              <  1:894626/85‑1 (MQ=255)
                                                    tctcTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCt                                                                                                                              >  2:894626/1‑85 (MQ=255)
                                                         ttCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGTAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAac                                                                               <  4:995346/127‑1 (MQ=255)
                                                         ttCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCctg                                                                                                       <  2:905307/103‑1 (MQ=255)
                                                         ttCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCctg                                                                                                       >  1:905307/1‑103 (MQ=255)
                                                         ttCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAac                                                                               <  4:924254/127‑1 (MQ=255)
                                                         ttCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAac                                                                               <  2:431258/127‑1 (MQ=255)
                                                         ttCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAac                                                                               >  1:431258/1‑127 (MQ=255)
                                                         ttCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAac                                                                               >  3:924254/1‑127 (MQ=255)
                                                         ttCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAac                                                                               >  3:995346/1‑127 (MQ=255)
                                                         ttCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAACTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGAc                                                                                                  >  4:960024/1‑108 (MQ=255)
                                                         ttCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAACTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGAc                                                                                                  <  3:960024/108‑1 (MQ=255)
                                                                    aCAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAac                                                                               >  4:277486/1‑116 (MQ=255)
                                                                    aCAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAac                                                                               <  3:277486/116‑1 (MQ=255)
                                                                       ggCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATaaaaaa                                                                                 >  4:1017572/1‑111 (MQ=255)
                                                                       ggCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATaaaaaa                                                                                 <  3:1017572/111‑1 (MQ=255)
                                                                           aTGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGCAACGAGGAAGAAGCTtttcgc                                                                                                                        <  2:372345‑M2/68‑7 (MQ=255)
                                                                           aTGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTtttcgc                                                                                                                        >  1:372345‑M2/1‑62 (MQ=255)
                                                                           aTGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTa                                                                                           >  4:611297/1‑97 (MQ=255)
                                                                           aTGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTa                                                                                           <  3:611297/97‑1 (MQ=255)
                                                                            tGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGc                                                                                                                               >  4:1069370/1‑60 (MQ=255)
                                                                            tGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGc                                                                                                                               <  3:1069370/60‑1 (MQ=255)
                                                                            tGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATaaaaa                                                                                  <  1:552942/105‑1 (MQ=255)
                                                                            tGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATaaaaa                                                                                  >  2:552942/1‑105 (MQ=255)
                                                                              gCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGtt                                                      >  4:780899/1‑131 (MQ=255)
                                                                              gCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGtt                                                      <  3:780899/131‑1 (MQ=255)
                                                                                 tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAgg                                                                                                                                      >  1:448310/1‑48 (MQ=255)
                                                                                 tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAgg                                                                                                                                      <  2:448310/48‑1 (MQ=255)
                                                                                 tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATaaaaaa                                                                                 <  2:1058904/101‑1 (MQ=255)
                                                                                 tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATaaaaaa                                                                                 >  1:1058904/1‑101 (MQ=255)
                                                                                 tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAACAAAACACAACGCTTTcaa                                                                  <  2:28450/116‑1 (MQ=255)
                                                                                 tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAAcaca                                                                            <  3:696684/106‑1 (MQ=255)
                                                                                 tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAAcaca                                                                            >  4:1020117/1‑106 (MQ=255)
                                                                                 tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAAcaca                                                                            <  3:1020117/106‑1 (MQ=255)
                                                                                 tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCt                                                                       >  3:904486/1‑111 (MQ=255)
                                                                                 tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCt                                                                       <  4:904486/111‑1 (MQ=255)
                                                                                 tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTcaa                                                                  >  1:28450/1‑116 (MQ=255)
                                                                                 tCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTACTGCTGACGGCACTACCATAAAAAAAcaca                                                                            >  4:696684/1‑106 (MQ=255)
                                                                                        ttGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATa                           >  1:551362/1‑148 (MQ=255)
                                                                                              tACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTa                                                                                           <  4:237759/78‑1 (MQ=255)
                                                                                              tACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGCCACTa                                                                                           >  3:237759/1‑78 (MQ=255)
                                                                                                   aaTTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTAc                                                                                          <  1:1082216/74‑1 (MQ=255)
                                                                                                   aaTTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTAc                                                                                          >  2:1082216/1‑74 (MQ=255)
                                                                                                                ggCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCt               <  1:57262/136‑1 (MQ=255)
                                                                                                                ggCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCt               >  2:57262/1‑136 (MQ=255)
                                                                                                                    gggCGAAAagcttcttcctcgtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgattgtaag                                          >  4:419565‑M1/1‑8 (MQ=255)
                                                                                                                    gggCGAAAagcttcttcctcgtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgattgtaag                                          <  3:419565‑M1/105‑98 (MQ=255)
                                                                                                                    gggCGAAACGAGGAAGAAGCTtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgat                                                <  3:529936‑M2/99‑79 (MQ=255)
                                                                                                                    gggCGAAACGAGGAAGAAGCTtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgat                                                >  4:529936‑M2/1‑21 (MQ=255)
                                                                                                                     ggCGAAACGAGGAAGAAGCTtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgat                                                <  1:154317‑M2/98‑79 (MQ=255)
                                                                                                                     ggCGAAACGAGGAAGAAGCTtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgat                                                >  2:154317‑M2/1‑20 (MQ=255)
                                                                                                                      gCGAAAagcttcttcctcgtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccat                                                                             >  1:372345‑M1/1‑6 (MQ=255)
                                                                                                                      gCGAAAagcttcttcctcgttgcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccat                                                                             <  2:372345‑M1/68‑63 (MQ=255)
                                                                                                                         aaaagcttcttcctcgtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgattgtaagagagtaaatactcaactatgatagagacgaaaataagaac  <  4:481450‑M1/140‑138 (MQ=255)
                                                                                                                         aaaagcttcttcctcgtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgattgtaagagagtaaatactcaactatgatagagacgaaaataagaac  >  3:481450‑M1/1‑3 (MQ=255)
                                                                                                                           aagcttcttcctcgtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgattgtaagagagtaaatactcaactatga                     <  4:43170‑M1/119‑119 (MQ=255)
                                                                                                                           aagcttcttcctcgtttcgccctgcctttcttaaaaattccgtaatgcaaagtctgaagccatcgcctgttgagcaatgaaagagatctgattgtaagagagtaaatactcaactatga                     >  3:43170‑M1/1‑1 (MQ=255)
                                                                                                                           aCGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGt                                         <  2:796109/99‑1 (MQ=255)
                                                                                                                           aCGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGt                                         >  1:796109/1‑99 (MQ=255)
                                                                                                                           |                                                                                                                                         
GTTCTTATTTTCGTCTCTATCATAGTTGAGTATTTACTCTCTTACAATCAGATCTCTTTCATTGCTCAACAGGCGATGGCTTCAGACTTTGCATTACGGAATTTTTAAGAAAGGCAGGGCGAAACGAGGAAGAAGCTTTTCGCCCTGGACAACATTCCTGCTGACGGCACTACCATAAAAAAACACAACGCTTTCAACAACCTTGCGTTTTTCATCTTCCGTAGCGGCTCGGAATAAATTTACGTTCTTACATTCCGTCTC  >  NC_000913/4190476‑4190736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.