New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1213722 =73 (0.780)8 (0.090) 7/186 NT 10.6% coding (338/732 nt) bluR repressor of blue light‑responsive genes
?NC_000913 1213743 = 67 (0.770)coding (317/732 nt) bluR repressor of blue light‑responsive genes

GCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTA  >  NC_000913/1213626‑1213872
                                                                                                                     |                                                                                                                                 
gcgcCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGAt                                                                                                     >  1:458683/1‑148 (MQ=255)
   ccGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGaa                                                                                                                                 <  3:615041/117‑1 (MQ=255)
   ccGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGaa                                                                                                                                 >  4:615041/1‑117 (MQ=255)
       cAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCAt                                                                                              >  4:97901/1‑148 (MQ=255)
         aaCATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCTAGTGAaataa                                                                                                                             <  3:652481/115‑1 (MQ=255)
         aaCATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAaataa                                                                                                                             >  4:652481/1‑115 (MQ=255)
         aaCATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGc                                                                                            <  2:458683/148‑1 (MQ=255)
          aCATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCg                                                                                           >  3:489998/1‑148 (MQ=255)
           cATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAaataa                                                                                                                             <  4:26319/113‑1 (MQ=255)
           cATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAaataa                                                                                                                             >  3:26319/1‑113 (MQ=255)
           cATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTa                                                                                                   >  2:1092462/1‑139 (MQ=255)
           cATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTa                                                                                                   <  1:1092462/139‑1 (MQ=255)
           cATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATg                                                                                             <  4:271505/145‑1 (MQ=255)
           cATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATg                                                                                             >  3:271505/1‑145 (MQ=255)
                   tCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATtc                                                                                                                          >  1:170493/1‑108 (MQ=255)
                   tCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATtc                                                                                                                          <  2:170493/108‑1 (MQ=255)
                        aTGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGAtt                                                                                                    <  4:1130468/125‑1 (MQ=255)
                        aTGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGAtt                                                                                                    >  3:1130468/1‑125 (MQ=255)
                        aTGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAg                                                                                                  >  4:343954/1‑127 (MQ=255)
                        aTGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAg                                                                                                  <  3:343954/127‑1 (MQ=255)
                         tGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGAcatcat                                                                            <  4:489998/148‑1 (MQ=255)
                                     tgtgATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCAtct                                                                          <  2:707593/138‑1 (MQ=255)
                                     tgtgATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCAtct                                                                          >  1:707593/1‑138 (MQ=255)
                                     tgtgATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATctct                                                                        >  1:1067551/1‑140 (MQ=255)
                                     tgtgATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATctct                                                                        <  2:1067551/140‑1 (MQ=255)
                                     tgtgATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAg                                                                >  2:864417/1‑148 (MQ=255)
                                        gATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTgg                                                                                                           >  3:591259/1‑102 (MQ=255)
                                        gATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTgg                                                                                                           <  4:591259/102‑1 (MQ=255)
                                          tCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCgaaga                                                                                       >  3:393398/1‑120 (MQ=255)
                                          tCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCgaaga                                                                                       <  4:393398/120‑1 (MQ=255)
                                          tCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCtctt                                                                       >  2:324552/1‑136 (MQ=255)
                                          tCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCtctt                                                                       <  1:324552/136‑1 (MQ=255)
                                           cAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCt                                                          <  1:864417/148‑1 (MQ=255)
                                                aCGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGt                                                     <  3:97901/148‑1 (MQ=255)
                                                   tcttcgcatggctaatcctgccaaactacgcgcgagaattatttcACTGGGTACTCTCGACCCAGTGa                                                                                                                                  >  1:911552‑M1/46‑68 (MQ=255)
                                                   tcttcgcatggctaatcctgccaaactacgcgcgagaattatttcACTGGGTACTCTCGACCCAGTGa                                                                                                                                  <  2:911552‑M1/23‑1 (MQ=255)
                                                              aaCAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAg                                                                                                  <  2:144510/89‑1 (MQ=255)
                                                              aaCAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAg                                                                                                  >  1:144510/1‑89 (MQ=255)
                                                                   gAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATctct                                                                        >  1:570326/1‑110 (MQ=255)
                                                                   gAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATctct                                                                        <  2:570326/110‑1 (MQ=255)
                                                                    aaGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGa                                                                                  <  1:489903/99‑1 (MQ=255)
                                                                    aaGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGa                                                                                  >  2:489903/1‑99 (MQ=255)
                                                                    aaGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCctggctg                                 >  2:338863/1‑148 (MQ=255)
                                                                    aaGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCctggctg                                 >  4:1141869/1‑148 (MQ=255)
                                                                      ggTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCtggt                               <  1:338863/148‑1 (MQ=255)
                                                                       gTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGaa                                                                                                                                 <  3:364504/49‑1 (MQ=255)
                                                                       gTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGaa                                                                                                                                 >  4:364504/1‑49 (MQ=255)
                                                                         aaaCATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTggtggt                            >  3:704059/1‑148 (MQ=255)
                                                                             aTGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGtt                                                                                                              <  3:727273/62‑1 (MQ=255)
                                                                             aTGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGtt                                                                                                              >  4:727273/1‑62 (MQ=255)
                                                                             aTGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTcc                        <  3:1141869/148‑1 (MQ=255)
                                                                              tGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAg                                                                <  4:578600/107‑1 (MQ=255)
                                                                              tGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAg                                                                >  3:578600/1‑107 (MQ=255)
                                                                                 ttAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCctggctgg                                >  2:382865/1‑136 (MQ=255)
                                                                                 ttAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCctggctgg                                <  1:382865/136‑1 (MQ=255)
                                                                                  tAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTaa                   >  4:623462/1‑148 (MQ=255)
                                                                                  tAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTCTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTACAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTaa                   <  4:704059/148‑1 (MQ=255)
                                                                                    aTCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATg                 <  3:623462/148‑1 (MQ=255)
                                                                                     tCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCtctt                                                                       <  3:739165/93‑1 (MQ=255)
                                                                                     tCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCa                                                       <  2:855163/109‑1 (MQ=255)
                                                                                     tCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCa                                                       >  1:855163/1‑109 (MQ=255)
                                                                                     tCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTaa                   <  1:681672/145‑1 (MQ=255)
                                                                                     tCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTaa                   >  2:681672/1‑145 (MQ=255)
                                                                                     tCAATTGATATACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCtctt                                                                       >  4:739165/1‑93 (MQ=255)
                                                                                        aTTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTc                                              <  4:726198/115‑1 (MQ=255)
                                                                                        aTTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTc                                              >  3:726198/1‑115 (MQ=255)
                                                                                          ccgatctcTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTTTTGCAGGCGGCTCCAGTCATATTCCGTACCCTGGCTGGTGGTTTCCAGTAATGCTTTaa           <  3:1106938/141‑1 (MQ=255)
                                                                                            aTCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCAt                                                                                              <  4:900625/63‑1 (MQ=255)
                                                                                            aTCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCAt                                                                                              >  3:900625/1‑63 (MQ=255)
                                                                                             tCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACatcatc                                                                           <  1:205113/81‑1 (MQ=255)
                                                                                             tCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACatcatc                                                                           >  2:205113/1‑81 (MQ=255)
                                                                                              tcactgggtcgagagtacccagtGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCgaaga                                                                                       <  2:911552‑M2/45‑1 (MQ=255)
                                                                                              tcactgggtcgagagtacccagtGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCgaaga                                                                                       >  1:911552‑M2/24‑68 (MQ=255)
                                                                                                actgggtcgagagtacccagtGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAAt                                                                                     >  2:1066579‑M2/22‑68 (MQ=255)
                                                                                                actgggtcgagagtacccagtGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAAt                                                                                     <  1:1066579‑M2/47‑1 (MQ=255)
                                                                                                actgggtcgagagtacccagtGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACatcatc                                                                           >  1:521736‑M2/22‑78 (MQ=255)
                                                                                                actgggtcgagagtacccagtGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACatcatc                                                                           <  2:521736‑M2/57‑1 (MQ=255)
                                                                                                ACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATctct                                                                        >  4:206320‑M1/1‑81 (MQ=255)
                                                                                                ACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATctct                                                                        <  3:206320‑M1/81‑1 (MQ=255)
                                                                                                  tgggtcgagagtacccagtGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCtggt                               <  2:452035‑M2/101‑1 (MQ=255)
                                                                                                  tgggtcgagagtacccagtGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCtggt                               >  1:452035‑M2/20‑120 (MQ=255)
                                                                                                   GGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCGGGTGGTTTCCAGTAATGctttaactagatcgg  <  4:1106938‑M1/148‑8 (MQ=255)
                                                                                                       aCTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACtt        >  3:484408/1‑138 (MQ=255)
                                                                                                       aCTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACtt        <  4:484408/138‑1 (MQ=255)
                                                                                                          ctcGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTg      <  1:33830/137‑1 (MQ=255)
                                                                                                          ctcGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTg      >  2:33830/1‑137 (MQ=255)
                                                                                                           tcGACCCAGTGAAATAATTCTCGCGCGTATTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGAGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTcc                        <  2:740314/118‑1 (MQ=255)
                                                                                                           tcGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTc                                              <  3:222894/96‑1 (MQ=255)
                                                                                                           tcGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTc                                              >  4:222894/1‑96 (MQ=255)
                                                                                                           tcGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTcc                        >  1:740314/1‑118 (MQ=255)
                                                                                                            cGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGc                                                                  <  2:955477/75‑1 (MQ=255)
                                                                                                            cGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGc                                                                  >  1:955477/1‑75 (MQ=255)
                                                                                                            cGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCt               <  4:628122/126‑1 (MQ=255)
                                                                                                            cGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCt               >  3:628122/1‑126 (MQ=255)
                                                                                                              acccagtGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACatcatc                                                                           <  1:573017‑M2/57‑1 (MQ=255)
                                                                                                              acccagtGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACatcatc                                                                           >  2:573017‑M2/8‑64 (MQ=255)
                                                                                                                   gtGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCctgg                                    <  2:926819‑M2/96‑1 (MQ=255)
                                                                                                                   gtGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCctgg                                    >  1:926819‑M2/3‑98 (MQ=255)
                                                                                                                     gAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTg      >  2:653990/1‑126 (MQ=255)
                                                                                                                     gAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTg      <  1:653990/126‑1 (MQ=255)
                                                                                                                     |                                                                                                                                 
GCGCCGTCAAACATACTGCTCATAATGCGGGAGGTGTTGTGATCAAGCACGAGACGCTGGCGAACAGGAAGGTAAACATGATTAATCAATTGATCTACTGGGTACTCTCGACCCAGTGAAATAATTCTCGCGCGTAGTTTGGCAGGATTAGCCATGCGAAGAATTGACATCATCTCTTCTTGCAGGCGGCTCCAGTCATCTTCCGTATCCTGGCTGGTGGTTTCCAGTAATGCTTTAACTTTGCCTA  >  NC_000913/1213626‑1213872

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.