BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1974246 =	73 (0.780)	4 (0.050)	4/182	NT	5.4%	coding (1079/1965 nt)	cheA	fused chemotactic sensory histidine kinase in two‑component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein
*	?	NC_000913	1974275 =	73 (0.860)	4 (0.050)	4/182	NT	5.4%	coding (1050/1965 nt)	cheA	fused chemotactic sensory histidine kinase in two‑component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein

Only 100 of 111 total aligned reads displayed.

CTGTTTTTACCTGCGGCGAGCCGTTTTTCTGGCAGTTCAATACCGTGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTACGTTGTAACTGCCCCATGCTGGTTATCAAATC  >  NC_000913/1974129‑1974421

cTGTTTTTACCTGCGGCGAGCCGTTTTTCTGGCAGTTCAATACCGTGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCt                                                                                                                                                   >  2:959224/1‑148 (MQ=255)

 tGTTTTTACCTGCGGCGAGCCGTTTTTCTGGCAGTTCAATACCGTGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTg                                                                                                                                                  <  1:959224/148‑1 (MQ=255)

                       tttttCTGGCAGTTCAATACCGTGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGATCTACCTGCTTGCCGAGTTTTCCCGCCAGa                                                                                                                            >  3:132601/1‑148 (MQ=255)

                        ttttCTGGCAGTTCAATACCGTGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGa                                                                                                                            >  3:432560/1‑147 (MQ=255)

                        ttttCTGGCAGTTCAATACCGTGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGa                                                                                                                            <  4:432560/147‑1 (MQ=255)

                              ggCAGTTCAATACCGTGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCa                                                                                                                     >  1:250629/1‑148 (MQ=255)

                                    tCAATACCGTGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAg                                                                                                                             <  4:900202/134‑1 (MQ=255)

                                      aaTACCGTGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAg                                                                                                                                         <  4:773721/120‑1 (MQ=255)

                                      aaTACCGTGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAg                                                                                                                                         >  3:773721/1‑120 (MQ=255)

                                       aTACCGTGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCggg                                                                                                            >  1:510095/1‑148 (MQ=255)

                                        tACCGTGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGt                                                                                                                                        >  3:1050570/1‑119 (MQ=255)

                                        tACCGTGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGt                                                                                                                                        <  4:1050570/119‑1 (MQ=255)

                                                   aagCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGc                                                                                                                                             >  3:756767/3‑103 (MQ=255)

                                                   aGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGc                                                                                                                                             <  4:756767/103‑1 (MQ=255)

                                                   aGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTaa                                                                                                >  1:646874/1‑148 (MQ=255)

                                                     gCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTaaaa                                                                                              <  2:646874/148‑1 (MQ=255)

                                                        aTTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCTACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCg                                                                                                              <  2:917666/129‑1 (MQ=255)

                                                        aTTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCggg                                                                                                            >  4:491297/1‑131 (MQ=255)

                                                        aTTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCg                                                                                                              >  1:917666/1‑129 (MQ=255)

                                                        aTTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACt                                                                                                  <  3:71490/141‑1 (MQ=255)

                                                        aTTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACt                                                                                                  >  4:71490/1‑141 (MQ=255)

                                                        aTTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACa                                                                                           >  3:975039/1‑148 (MQ=255)

                                                           gCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACatat                                                                                        <  2:510095/148‑1 (MQ=255)

                                                           gCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACatat                                                                                        <  2:250629/148‑1 (MQ=255)

                                                                   ggTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTaaaa                                                                                              <  3:212712/134‑1 (MQ=255)

                                                                   ggTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTaaaa                                                                                              >  4:212712/1‑134 (MQ=255)

                                                                   ggTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATAtt                                                                                       <  3:980917/141‑1 (MQ=255)

                                                                    gTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACatat                                                                                        >  2:405597/1‑139 (MQ=255)

                                                                    gTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACatat                                                                                        <  1:405597/139‑1 (MQ=255)

                                                                       ggTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGa                                                                                                                                          >  1:951121/1‑86 (MQ=255)

                                                                       ggTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGa                                                                                                                                          <  2:951121/86‑1 (MQ=255)

                                                                        gTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGtt                                                                                                                                       <  1:298994/88‑1 (MQ=255)

                                                                        gTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGtt                                                                                                                                       >  2:298994/1‑88 (MQ=255)

                                                                         tCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGcat                                                                             >  3:607595/1‑145 (MQ=255)

                                                                          cAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTg                                                                                                                                                  <  1:185480/75‑1 (MQ=255)

                                                                          cAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTg                                                                                                                                                  <  3:338695/75‑1 (MQ=255)

                                                                          cAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTg                                                                                                                                                  >  2:185480/1‑75 (MQ=255)

                                                                          cAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTg                                                                                                                                                  >  4:338695/1‑75 (MQ=255)

                                                                                 tCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCa                                                                                    >  3:204087/1‑130 (MQ=255)

                                                                                 tCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCa                                                                                    <  4:204087/130‑1 (MQ=255)

                                                                                       aTGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCa                                                            <  4:132601/148‑1 (MQ=255)

                                                                                         gCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGGACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCAt                                                                                   <  2:102464/123‑1 (MQ=255)

                                                                                         gCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCCCGCACCAGCCGGGGATAGCGACTAAAAACATATTCCAt                                                                                   >  1:102464/1‑123 (MQ=255)

                                                                                          cGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTg                                                         <  4:975039/148‑1 (MQ=255)

                                                                                            ttCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGa                                                                                                    >  2:572216/1‑103 (MQ=255)

                                                                                            ttCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGa                                                                                                    <  1:572216/103‑1 (MQ=255)

                                                                                                aTCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTcc                                                                                                                                   <  1:963381/68‑1 (MQ=255)

                                                                                                aTCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACATGCTTGCCGAGTTTTcc                                                                                                                                   >  2:963381/1‑68 (MQ=255)

                                                                                                 tCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTaaaaa                                                                                             >  2:886005/1‑105 (MQ=255)

                                                                                                    ggCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCgggg                                                                                                           >  3:815234/1‑88 (MQ=255)

                                                                                                    ggCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCgggg                                                                                                           <  4:815234/88‑1 (MQ=255)

                                                                                                    ggCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCCTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACat                                                                                          >  2:964062/1‑105 (MQ=255)

                                                                                                    ggCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCGGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACat                                                                                          <  1:964062/105‑1 (MQ=255)

                                                                                                     gCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTg                                                                                                                                                  <  3:1120049/48‑1 (MQ=255)

                                                                                                     gCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTg                                                                                                                                                  >  4:1120049/1‑48 (MQ=255)

                                                                                                      cTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTg                                                  >  1:1125828/1‑143 (MQ=255)

                                                                                                      cTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTg                                                  <  2:1125828/143‑1 (MQ=255)

                                                                                                        tttGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACatat                                                                                        <  1:1079087/103‑1 (MQ=255)

                                                                                                        tttGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACatat                                                                                        >  2:1079087/1‑103 (MQ=255)

                                                                                                               aGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCgggg                                                                                                           >  4:119213/1‑77 (MQ=255)

                                                                                                               aGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCa                                                                                    >  4:889642/1‑100 (MQ=255)

                                                                                                               aGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCa                                                                                    <  3:889642/100‑1 (MQ=255)

                                                                                                                  tCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAAc                                                                                            >  4:596980/1‑89 (MQ=255)

                                                                                                                  tCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAAc                                                                                            <  3:596980/89‑1 (MQ=255)

                                                                                                                  tCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATc                                                                                  <  3:437891/99‑1 (MQ=255)

                                                                                                                  tCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATc                                                                                  >  4:437891/1‑99 (MQ=255)

                                                                                                                      tagaactgacgctggtgggcagttctacCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCAt                                                                                   >  1:256016‑M2/29‑94 (MQ=255)

                                                                                                                      tagaactgacgctggtgggcagttctacCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCAt                                                                                   <  2:256016‑M2/66‑1 (MQ=255)

                                                                                                                      TAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGAt                                                                                                         <  3:21032‑M1/72‑1 (MQ=255)

                                                                                                                      TAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACatat                                                                                        <  1:89576‑M1/89‑1 (MQ=255)

                                                                                                                      TAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTACGTTg                             <  3:1129082‑M1/148‑1 (MQ=255)

                                                                                                                      TAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGAACCAGCCGGGGATAGCGACTAAAAACatat                                                                                        >  2:89576‑M1/1‑89 (MQ=255)

                                                                                                                        gaactgacgctggtgggcagttctacCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTaaaa                                                                                              <  1:413639‑M2/55‑1 (MQ=255)

                                                                                                                        GAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTACGTTGTa                           >  4:1129082‑M1/1‑148 (MQ=255)

                                                                                                                         AACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCg                                                                                                                                           <  3:280028‑M1/35‑1 (MQ=255)

                                                                                                                         AACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCg                                                                                                                                           >  4:280028‑M1/1‑35 (MQ=255)

                                                                                                                          ACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTACGTTgtacc                         <  4:224333‑M1/148‑3 (MQ=255)

                                                                                                                             GCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTc                                                                                      >  4:1136547‑M1/1‑84 (MQ=255)

                                                                                                                             GCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTc                                                                                      <  3:1136547‑M1/84‑1 (MQ=255)

                                                                                                                               ccaccaGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTACGTTGTAACTGccc                    <  3:224333/148‑1 (MQ=255)

                                                                                                                                caccaGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTACGTTGTAACTGcccc                   >  1:1082802/1‑148 (MQ=255)

                                                                                                                                caccaGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTACGTTGTAACTGcccc                   >  4:391673/1‑148 (MQ=255)

                                                                                                                                 accaGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCgc                                    <  4:780369/130‑2 (MQ=255)

                                                                                                                                 accaGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGt                                    >  3:780369/1‑130 (MQ=255)

                                                                                                                                  ccaGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCg                                                                       <  2:374970/94‑1 (MQ=255)

                                                                                                                                  ccaGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCg                                                                       >  1:374970/1‑94 (MQ=255)

                                                                                                                                  ccaGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCa                                           >  1:1103870/1‑122 (MQ=255)

                                                                                                                                           gttctacCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACg                                         <  2:216532‑M2/108‑1 (MQ=255)

                                                                                                                                           gttctacCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACg                                         >  1:216532‑M2/8‑115 (MQ=255)

                                                                                                                                            ttctacCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTACGTTGTAACTGCCCCATGCTGGTTATc       >  2:671569‑M2/7‑148 (MQ=255)

                                                                                                                                             tctacCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGcat                                                                             <  1:493344‑M2/72‑1 (MQ=255)

                                                                                                                                             tctacCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGcat                                                                             >  2:493344‑M2/6‑77 (MQ=255)

                                                                                                                                             tctacCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGcat                                                                             >  2:312065‑M2/6‑77 (MQ=255)

                                                                                                                                             tctacCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGAc                                                                <  1:912472‑M2/85‑1 (MQ=255)

                                                                                                                                             tctacCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTAc                                 <  1:83345‑M2/116‑1 (MQ=255)

                                                                                                                                             tctacCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTAc                                 >  2:83345‑M2/6‑121 (MQ=255)

                                                                                                                                             tctacCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTACGTTGTAACTg                       >  2:609918‑M2/6‑131 (MQ=255)

                                                                                                                                             tctacCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTACGTTGTAACTg                       <  1:609918‑M2/126‑1 (MQ=255)

                                                                                                                                                 cCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTACGTTGTAACTGCCCCATGCTGGTTATCAAATc  >  4:803258‑M2/2‑148 (MQ=255)

                                                                                                                                                 cCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTACGTTGTAACTGCCCCATGCTGGTTATCAAATc  <  3:803258‑M2/147‑1 (MQ=255)

CTGTTTTTACCTGCGGCGAGCCGTTTTTCTGGCAGTTCAATACCGTGATCGAGGCTATTGCGTACCAGGTGGGTCAGCGGGTCGATAATGCGTTCTATCAGGCTTTTGTCGAGTTCAGTAGAACTGCCCACCAGCGTCAGTTCTACCTGCTTGCCGAGTTTTCCCGCCAGATCACGCACCAGCCGGGGATAGCGACTAAAAACATATTCCATCGGCATCATGCGAATCGACATCACTGATTCCTGCAAATCACGGGCGTTACGTTGTAACTGCCCCATGCTGGTTATCAAATC  >  NC_000913/1974129‑1974421

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.