| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3620621 = | NA (NA) | 10 (0.110) | 5/188 | NT | 100% | coding (1430/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | 3620630 = | 0 (0.000) | coding (1439/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
TCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTG > NC_000913/3620483‑3620737 | cggtggcatcttccgttgcgcagggtaagtcactgtgtggattatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggc > 2:638846‑M2/148‑148 (MQ=255) ggtggcatcttccgttgcgcagggtaagtcactgtgtggattatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCt < 3:236934‑M2/2‑1 (MQ=255) tggcatcttccgttgcgcagggtaagtcactgtgtggattatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGa < 1:75639‑M2/4‑1 (MQ=255) tggcatcttccgttgcgcagggtaagtcactgtgtggattatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGa > 2:75639‑M2/145‑148 (MQ=255) ggcatcttccgttgcgcagggtaagtcactgtgtggattatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggccgaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGAc > 1:664539‑M2/144‑148 (MQ=255) gcatcttccgttgcgcagggtaagtcactgtgtggattatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGACg < 1:847983‑M2/6‑1 (MQ=255) atcttccgttgcgcagggtaagtcactgtgtggattatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTg > 1:518853‑M2/141‑143 (MQ=255) atcttccgttgcgcagggtaagtcactgtgtggattatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTg < 2:518853‑M2/3‑1 (MQ=255) gggtaagtcactgtgtggattatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggc > 4:926388‑M2/126‑126 (MQ=255) gggtaagtcactgtgtggattatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggc < 3:926388‑M2/1‑1 (MQ=255) actgtgtggattatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGACg > 4:154989‑M2/117‑122 (MQ=255) actgtgtggattatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGACg < 3:154989‑M2/6‑1 (MQ=255) ggattatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGa < 4:523797‑M2/4‑1 (MQ=255) ggattatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGa > 3:523797‑M2/110‑113 (MQ=255) ttatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTg < 3:296890‑M2/3‑1 (MQ=255) ttatcataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTg > 4:296890‑M2/107‑109 (MQ=255) cataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggc > 4:363692‑M2/103‑103 (MQ=255) cataacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggc < 3:363692‑M2/1‑1 (MQ=255) taacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGa < 3:554274‑M2/4‑1 (MQ=255) taacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGa > 4:554274‑M2/101‑104 (MQ=255) taacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGa < 3:980860‑M2/4‑1 (MQ=255) taacggtaccgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGa > 4:980860‑M2/101‑104 (MQ=255) aacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGa > 1:56505‑M2/100‑103 (MQ=255) aacggtagcgggtgatatcgccgtcaggggcagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGa < 2:56505‑M2/4‑1 (MQ=255) cagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTg < 3:434367‑M2/3‑1 (MQ=255) cagtttcctgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTg > 4:434367‑M2/70‑72 (MQ=255) tgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGACg > 3:347736‑M2/62‑67 (MQ=255) tgaatcagacggcccaattcatcatattcccggcgcaattccagcccgtcaggcccggtggCTGACg < 4:347736‑M2/6‑1 (MQ=255) gcccgtcaggcccggtggCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGcccc > 1:680945‑M2/19‑82 (MQ=255) gcccgtcaggcccggtggCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGcccc < 2:680945‑M2/64‑1 (MQ=255) cccgtcaggcccggtggCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGCCGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTg > 1:307187‑M2/18‑125 (MQ=255) cccgtcaggcccggtggCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTg < 2:307187‑M2/108‑1 (MQ=255) cgtcaggcccggtggCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTgg > 4:1007620‑M2/16‑54 (MQ=255) cgtcaggcccggtggCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTgg < 3:1007620‑M2/39‑1 (MQ=255) cgtcaggcccggtggCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTa > 4:808779‑M2/16‑106 (MQ=255) cgtcaggcccggtggCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTa < 3:808779‑M2/91‑1 (MQ=255) cgtcaggcccggtggCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTg > 4:276045‑M2/16‑123 (MQ=255) cgtcaggcccgggggCTGACGGGCGGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTg < 3:276045‑M2/108‑1 (MQ=255) | TCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTG > NC_000913/3620483‑3620737 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |