| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,776,125 | C→T | 7.6% | S185F (TCC→TTC) ‡ | mtlR → | mannitol operon repressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,776,125 | 0 | C | T | 7.6% | 797.7 / 37.8 | 247 | S185F (TCC→TTC) ‡ | mtlR | mannitol operon repressor |
| Reads supporting (aligned to +/- strand): ref base C (115/113); new base T (9/10); total (124/123) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.63e-01 | |||||||||||
Only 100 of 255 total aligned reads displayed.
GGCGTTACCACCGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGCTTTCATCGGGTATTCCGGACGGAATCG > NC_000913/3776006‑3776271 | ccaccGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCaa > 1:612449/1‑116 (MQ=255) accGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCTATCAACAATGGTCCTTTCACTGACTAAGCTGATTTTGGAAATCAg < 3:906732/120‑1 (MQ=255) accGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTTGGAAATCAGCtc > 2:475639/1‑122 (MQ=255) accGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCa < 1:604712/119‑1 (MQ=255) accGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAg > 3:263640/1‑120 (MQ=255) accGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTAAGCTGATTTTGGAAATCAg > 4:906732/1‑120 (MQ=255) ccgccACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGt > 4:545786/1‑148 (MQ=255) gccACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCttt < 2:609025/130‑1 (MQ=255) gccACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCt < 3:972014/148‑1 (MQ=255) cacaGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCaaa > 1:804717/1‑132 (MQ=255) caGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTa > 1:496316/1‑134 (MQ=255) ttGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTg > 4:184110/1‑148 (MQ=255) gAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGcc < 3:184110/148‑1 (MQ=255) aaCCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAATTCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTg < 1:68175/138‑1 (MQ=255) aCCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTaaaaaa > 4:346347/1‑111 (MQ=255) ccAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTTGGAAATCAg < 1:1070978/101‑1 (MQ=255) agcagACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCtt < 1:207897/114‑1 (MQ=255) agcagACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCtt > 2:207897/1‑114 (MQ=255) ccAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTTGGAAATCAGCtc > 3:922023/1‑93 (MQ=255) ccAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTg < 2:977070/126‑1 (MQ=255) ccAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTg > 4:113792/1‑126 (MQ=255) ccAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTg > 1:977070/1‑126 (MQ=255) aGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTaaaaaa > 2:91385/1‑98 (MQ=255) gTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTTGGAAATCAg < 2:671117/88‑1 (MQ=255) tttGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTa > 2:130841/1‑111 (MQ=255) atgcaatgcaAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTTGGAAATCAGCt > 1:556197/1‑84 (MQ=255) atgcaatgcaAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTTGGAAATCAGCt > 3:329849/1‑84 (MQ=255) atgcaatgcaAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCaaa > 1:655646/1‑102 (MQ=255) gcaatgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATaaa > 1:846750/1‑148 (MQ=255) caatgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAg > 3:830063/1‑148 (MQ=255) aatgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCg > 2:648875/1‑141 (MQ=255) tgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTTGGAAATCAGCtc < 3:1027037/79‑2 (MQ=38) tgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTTGGAAATCAGCtc > 4:1027037/1‑78 (MQ=38) tgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTaaaaaa < 2:1026399/85‑1 (MQ=255) tgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGccc < 4:401361/121‑1 (MQ=255) tgcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGccc > 3:401361/1‑121 (MQ=255) gcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCagacgt < 2:306354/108‑6 (MQ=255) gcaaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCagacgt > 1:306354/1‑103 (MQ=255) caaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAATGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCt > 3:1077564/1‑130 (MQ=255) caaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCAGACGT‑TGCTTAc > 2:697638/1‑114 (MQ=255) caaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTc < 1:856436/107‑1 (MQ=255) caaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTc > 2:856436/1‑107 (MQ=255) caaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCt < 4:1077564/130‑1 (MQ=255) caaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATa > 3:72166/1‑140 (MQ=255) caaATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCcgac > 4:1053966/1‑148 (MQ=255) aaaTTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCcgacg < 4:830063/148‑1 (MQ=255) aaTTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCct < 3:1045550/119‑1 (MQ=255) ttCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTACACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCgg > 4:955608/1‑130 (MQ=255) tCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCa < 4:292188/97‑1 (MQ=255) cAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGataat < 1:1093902/148‑1 (MQ=255) aTCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTaaaaaa > 2:833412/1‑70 (MQ=255) aTCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTaaaaaa > 4:49853/1‑70 (MQ=255) aTCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTaaaaaa < 3:49853/70‑1 (MQ=255) tCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTc < 1:1017075/144‑1 (MQ=255) cAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGc > 1:37101/1‑114 (MQ=255) cAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGc < 2:37101/114‑1 (MQ=255) aCAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGTTTAAAAAAAGCCTTTCaaa < 2:59343/77‑1 (MQ=255) aCAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCg > 1:739900/1‑120 (MQ=255) aCAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCg > 3:808959/1‑120 (MQ=255) cAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCttt > 2:794604/1‑72 (MQ=255) cAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCctc > 3:142489/1‑104 (MQ=255) cAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGtt > 3:85626/1‑148 (MQ=255) aGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTg < 3:636852/148‑1 (MQ=255) cTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGc > 2:433303/1‑79 (MQ=255) tgtgCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAg < 2:1087967/77‑1 (MQ=255) tgtgCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGa < 1:152758/148‑1 (MQ=255) gtgCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGat < 3:544487/148‑1 (MQ=255) tCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTg > 4:193940/1‑79 (MQ=255) caacaaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACgg > 1:436212/1‑148 (MQ=255) acaaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCttt < 1:119920/57‑1 (MQ=255) acaaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCt > 4:896812/1‑55 (MQ=255) acaaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCt > 4:708931/1‑55 (MQ=255) acaaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTg > 2:338339/1‑95 (MQ=255) acaaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTg < 1:338339/95‑1 (MQ=255) acaaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCtt < 1:567617/98‑1 (MQ=255) acaaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCCTAAAAAAAGCCttt > 2:119920/1‑57 (MQ=255) caaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTg > 4:799518/1‑75 (MQ=255) caaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGt < 3:337635/134‑1 (MQ=255) aaTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACg < 1:9176/148‑1 (MQ=255) aTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAATCCTTTCaaa < 4:739878/58‑1 (MQ=255) aTGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCaaa > 3:739878/1‑58 (MQ=255) aTGGTCCTTTCACTGACTGAGCTGAGTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGGAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGc > 2:264295/1‑148 (MQ=255) tCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTg > 2:558896/1‑69 (MQ=255) tttCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCt > 2:497751/1‑68 (MQ=255) ttCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAg > 4:485060/1‑56 (MQ=255) ttCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTg > 3:451567/1‑65 (MQ=255) ttCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCcg > 4:667032/1‑102 (MQ=255) ttCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGCTTTCATCg < 1:264295/148‑1 (MQ=255) tCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCcg > 2:510756/1‑101 (MQ=255) ctgactgaGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGCTTTCATc < 3:203779/143‑1 (MQ=255) ctgaGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGc < 4:331510/83‑1 (MQ=255) gaGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACgg > 4:234300/1‑125 (MQ=255) gaGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGCTTTCATCGGGTATTCcgg < 4:818729/148‑1 (MQ=255) gCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGCTTTCATCGGGTATTCcggac > 3:670411/1‑148 (MQ=255) cTGATTTTGGAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGata < 3:112923/95‑1 (MQ=255) tGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCtt < 2:769134/73‑1 (MQ=255) gATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGata < 3:209575/93‑1 (MQ=255) gATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGata > 4:209575/1‑93 (MQ=255) ttCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGAtata > 1:507155/1‑113 (MQ=255) ccAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAg > 1:777539/1‑97 (MQ=255) | GGCGTTACCACCGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAAGCA‑ACGTCTGCTTACTGCCCCTCTACCTGCTTCGGCCGATAAAGCCGACGATAATACTCCAGACGTTGTAGATATAACGGCACGCTTTCATCGGGTATTCCGGACGGAATCG > NC_000913/3776006‑3776271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |