Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,894,868 G→C 5.3% A73P (GCT→CCT)  chrR → chromate reductase, Class I, flavoprotein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,894,8680GC 5.3% 410.2 / 9.1 112A73P (GCT→CCT) chrRchromate reductase, Class I, flavoprotein
Reads supporting (aligned to +/- strand):  ref base G (52/54);  new base C (3/3);  total (55/57)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 115 total aligned reads displayed.

CACGTACCCTGCCGAAAATTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGATT  >  NC_000913/3894722‑3895014
                                                                                                                                                  |                                                                                                                                                  
cACGTACCCTGCCGAAAATTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGc                                                                                                                                                   >  4:12021/1‑148 (MQ=255)
       ccTGCCGAAAATTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGgt                                                                                                                                            <  3:66726/148‑1 (MQ=255)
       ccTGCCGAAAATTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGgt                                                                                                                                            >  3:1020802/1‑148 (MQ=255)
        cTGCCGAAAATTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGgtg                                                                                                                                           >  4:1141296/1‑148 (MQ=255)
        cTGCCGAAAATTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGgtg                                                                                                                                           <  4:1020802/148‑1 (MQ=255)
           ccGAAAATTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTgtgg                                                                                                                                        <  2:851077/148‑1 (MQ=255)
            cGAAAATTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGgtgt                                                                                                                                          >  2:999993/1‑145 (MQ=255)
            cGAAAATTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGgtgt                                                                                                                                          <  1:999993/145‑1 (MQ=255)
             gAAAATTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTgtggtg                                                                                                                                      >  4:63973/1‑148 (MQ=255)
                 aTTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCg                                                                                                                                  <  3:63973/148‑1 (MQ=255)
                 aTTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCg                                                                                                                                  <  3:12021/148‑1 (MQ=255)
                       ccGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGCCTGACgga                                                                                                                                            >  2:560574/1‑131 (MQ=255)
                          gCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTgtggt                                                                                                                                       >  4:1053766/1‑134 (MQ=255)
                          gCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTgtggt                                                                                                                                       <  3:1053766/134‑1 (MQ=255)
                           cGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACgg                                                                                                                                             >  4:629173/1‑127 (MQ=255)
                           cGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACgg                                                                                                                                             <  3:629173/127‑1 (MQ=255)
                           cGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGa                                                                                                                        <  3:1141296/148‑1 (MQ=255)
                              gCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAata                                                                                                                     <  4:379329/148‑1 (MQ=255)
                                 tGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGtgtg                                                                                                                                         >  2:318221/1‑125 (MQ=255)
                                 tGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTgtggt                                                                                                                                       <  2:3675/127‑1 (MQ=255)
                                 tGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTgtggt                                                                                                                                       >  1:3675/1‑127 (MQ=255)
                                       tCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGgtgt                                                                                                                                          >  2:516592/1‑118 (MQ=255)
                                       tCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGgtgt                                                                                                                                          <  1:516592/118‑1 (MQ=255)
                                         aaTGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCgg                                                                                                          >  3:608161/1‑148 (MQ=255)
                                          aTGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAAtata                                                                                                                   <  3:788698/138‑1 (MQ=255)
                                          aTGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAAtata                                                                                                                   >  4:788698/1‑138 (MQ=255)
                                          aTGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAacta                                                                                                               <  2:997569/142‑1 (MQ=255)
                                          aTGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAacta                                                                                                               >  1:997569/1‑142 (MQ=255)
                                          aTGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGCCTGACgg                                                                                                                                             <  1:772736/112‑1 (MQ=255)
                                          aTGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGCCTGACgg                                                                                                                                             >  2:772736/1‑112 (MQ=255)
                                           tGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTa                                                                                                        >  1:623544/1‑148 (MQ=255)
                                               ttACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCgg                                                                                                    >  3:775572/1‑148 (MQ=255)
                                                 aCCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGt                                                                                                  <  2:623544/148‑1 (MQ=255)
                                                   catccatTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGAt                                                                                                                                    >  2:841931/1‑112 (MQ=255)
                                                   catccatTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGAt                                                                                                                                    <  3:1104296/112‑1 (MQ=255)
                                                     tccatTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAac                                                                                                                 >  4:487659/1‑129 (MQ=255)
                                                     tccatTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAac                                                                                                                 <  3:487659/129‑1 (MQ=255)
                                                     tccatTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGc                                                                                              <  4:608161/148‑1 (MQ=255)
                                                      ccatTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGAt                                                                                                                                    >  2:551691/1‑109 (MQ=255)
                                                      ccatTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGAt                                                                                                                                    <  1:551691/109‑1 (MQ=255)
                                                        atTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGa                                                                                           >  1:25527/1‑148 (MQ=255)
                                                         ttGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGATGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGTTCGTCACGCCGGAat                                                                                                                      <  4:677768/120‑1 (MQ=255)
                                                         ttGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGTTCGTCACGCCGGAat                                                                                                                      >  3:677768/1‑120 (MQ=255)
                                                            ccGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGaaaaa                                                                                       >  2:978050/1‑148 (MQ=255)
                                                             cGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCggg                                                                                                   >  2:218908/1‑135 (MQ=255)
                                                             cGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCggg                                                                                                   <  1:218908/135‑1 (MQ=255)
                                                             cGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCggg                                                                                                   <  1:661427/135‑1 (MQ=255)
                                                                     ccTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAata                                                                                                                     >  2:556614/1‑109 (MQ=255)
                                                                     ccTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAata                                                                                                                     <  1:556614/109‑1 (MQ=255)
                                                                       ttGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACt                                                                            >  1:1125669/1‑148 (MQ=255)
                                                                        tGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGgtg                                                                                                                                           >  2:800406/1‑84 (MQ=255)
                                                                        tGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGgtg                                                                                                                                           <  1:800406/84‑1 (MQ=255)
                                                                        tGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGc                                                                                              >  2:186068/1‑129 (MQ=255)
                                                                        tGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGc                                                                                              <  1:186068/129‑1 (MQ=255)
                                                                           aTGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAat                                                                                                                      <  1:112830/102‑1 (MQ=255)
                                                                            tGACGCTGACGTACAGCAGTAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCtt                                                                       <  4:775572/148‑1 (MQ=255)
                                                                                   gACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGcc                                                                >  3:802695/1‑148 (MQ=255)
                                                                                           gcagGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCttt                                                                      >  3:1091383/1‑134 (MQ=255)
                                                                                           gcagGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCttt                                                                      >  3:1031136/1‑134 (MQ=255)
                                                                                           gcagGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCttt                                                                      <  4:1091383/134‑1 (MQ=255)
                                                                                           gcagGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCttt                                                                      <  4:1031136/134‑1 (MQ=255)
                                                                                            cagGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTg                                                                                                 >  3:458849/1‑106 (MQ=255)
                                                                                              ggAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAAtata                                                                                                                   >  4:643025/1‑86 (MQ=255)
                                                                                                aagaagGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATaa                                                                                                                  <  3:644977/85‑1 (MQ=255)
                                                                                                aagaagGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATaa                                                                                                                  >  4:411973/1‑85 (MQ=255)
                                                                                                        tttCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGa                                                                                                                                                >  4:110046/1‑47 (MQ=255)
                                                                                                             aGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAacta                                                                                                               <  4:584449/75‑1 (MQ=255)
                                                                                                             aGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAacta                                                                                                               >  3:584449/1‑75 (MQ=255)
                                                                                                             aGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAGAATGCCa                                                                                  >  2:897274/1‑104 (MQ=255)
                                                                                                             aGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCa                                                                                  <  2:603505/104‑1 (MQ=255)
                                                                                                             aGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCa                                                                                  <  1:897274/104‑1 (MQ=255)
                                                                                                             aGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCa                                                                                  >  1:603505/1‑104 (MQ=255)
                                                                                                              gCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCgg                                                          >  2:140532/1‑127 (MQ=255)
                                                                                                              gCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCgg                                                          <  1:140532/127‑1 (MQ=255)
                                                                                                              gCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAAc                                     <  4:802695/148‑1 (MQ=255)
                                                                                                                   ggTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTa                                <  2:25527/148‑1 (MQ=255)
                                                                                                                     ttGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTAtt                              >  3:640711/1‑148 (MQ=255)
                                                                                                                      tGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGcc                                            >  3:897937/1‑133 (MQ=255)
                                                                                                                      tGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGACTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTg                             >  1:90964/1‑148 (MQ=255)
                                                                                                                         aGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGt                                                                                                  >  1:75047/1‑76 (MQ=255)
                                                                                                                         aGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGt                                                                                                  <  2:75047/76‑1 (MQ=255)
                                                                                                                         aGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTaaa                                      >  4:855733/1‑136 (MQ=255)
                                                                                                                          gCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGACTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTc                         <  2:90964/148‑1 (MQ=255)
                                                                                                                             ctgacGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGa                      >  1:458622/5‑148 (MQ=255)
                                                                                                                             ctGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAAtata                                                                                                                   <  3:775022/55‑1 (MQ=255)
                                                                                                                             ctGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAAtata                                                                                                                   >  4:775022/1‑55 (MQ=255)
                                                                                                                               ggCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTgg                                                                          <  1:544238/94‑1 (MQ=255)
                                                                                                                               ggCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTgg                                                                          >  2:544238/1‑94 (MQ=255)
                                                                                                                                gCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCa                   <  1:978050/148‑1 (MQ=255)
                                                                                                                                    aaCAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCttt                                                                      >  3:386181/1‑93 (MQ=255)
                                                                                                                                    aaCAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCttt                                                                      <  4:386181/93‑1 (MQ=255)
                                                                                                                                     aCAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCa              <  4:640711/148‑1 (MQ=255)
                                                                                                                                      cAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAAtata                                                                                                                   >  4:343188/1‑46 (MQ=255)
                                                                                                                                      cAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAAtata                                                                                                                   <  3:343188/46‑1 (MQ=255)
                                                                                                                                        gATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATg           >  4:1120007/1‑148 (MQ=255)
                                                                                                                                         caccGTCAGCCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTgg                                                                          <  1:541182/82‑1 (MQ=255)
                                                                                                                                          tCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATggg         <  2:1125669/148‑1 (MQ=255)
                                                                                                                                          tCCGTCAGGCTGACGGTGGGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATggg         <  3:1120007/148‑1 (MQ=255)
                                                                                                                                                 ggCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGAtt  >  1:269358/1‑148 (MQ=255)
                                                                                                                                                  gCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGAcc                    >  1:940320/1‑129 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
CACGTACCCTGCCGAAAATTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGATT  >  NC_000913/3894722‑3895014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: