| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,935,454 | A→C | 5.4% | N56T (AAC→ACC) | rbsC → | D‑ribose ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,935,454 | 0 | A | C | 5.4% | 413.6 / 12.7 | 112 | N56T (AAC→ACC) | rbsC | D‑ribose ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (56/50); new base C (3/3); total (59/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.85e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
TTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGC > NC_000913/3935317‑3935595 | ttATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCa > 1:148309/1‑143 (MQ=255) aaaGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCGATATTCTCCAGCAAACCTCAGTGAACGCCATTa > 2:829664/1‑136 (MQ=255) aTGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGcc < 3:735856/120‑1 (MQ=255) aGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGaa > 3:1054869/1‑112 (MQ=255) aGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGaa < 4:1054869/112‑1 (MQ=255) aTCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATg > 2:1006854/1‑115 (MQ=255) aTCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATg < 1:1006854/115‑1 (MQ=255) cTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCt > 2:948510/1‑137 (MQ=255) cTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCt < 1:948510/137‑1 (MQ=255) tCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCTGTCGGGATGACGCTgg > 4:84458/1‑126 (MQ=255) cGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGACCGCCATAATGGCgtt < 2:423822/111‑3 (MQ=255) tctGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTc > 2:778447/1‑109 (MQ=255) tctGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTc < 1:778447/109‑1 (MQ=255) cTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGAt > 4:190651/1‑116 (MQ=255) cTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGAt < 3:190651/116‑1 (MQ=255) tGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTg > 3:691975/1‑110 (MQ=255) tGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTg < 4:691975/110‑1 (MQ=255) tCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCGATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTa > 3:699538/1‑87 (MQ=255) tCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATCTTCTCCAGCAAACCTCAGTGAACGCCATTa < 4:699538/87‑1 (MQ=255) tCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTa < 3:459499/140‑1 (MQ=255) tCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTa > 4:459499/1‑140 (MQ=255) aTTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCggg > 3:1321/1‑93 (MQ=255) aTTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCggg < 4:1321/93‑1 (MQ=255) tGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCAt < 3:611794/120‑1 (MQ=255) tGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGgcg > 3:1014920/1‑148 (MQ=255) ctcGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCg > 4:179221/1‑112 (MQ=255) ctcGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCg < 3:179221/112‑1 (MQ=255) tcGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGa > 4:717695/1‑148 (MQ=255) aCGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCggg < 3:96752/84‑1 (MQ=255) tAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCg < 3:476982/104‑1 (MQ=255) tAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCg > 4:476982/1‑104 (MQ=255) tAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGgcg < 2:71593/137‑1 (MQ=255) tAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGgcg > 1:71593/1‑137 (MQ=255) cccGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCATGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGtt > 3:1041316/1‑148 (MQ=255) ccGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTtg < 4:1014920/148‑1 (MQ=255) ccGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTtg > 4:326695/1‑148 (MQ=255) ccGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTtg < 3:717695/148‑1 (MQ=255) cGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGACCGCCATAATGGCGTTc > 1:512383/1‑71 (MQ=255) cGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGt > 1:35212/1‑126 (MQ=255) cGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGt < 2:35212/126‑1 (MQ=255) gAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACt > 2:236309/1‑107 (MQ=255) gAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACt < 1:236309/107‑1 (MQ=255) aaCTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAgg < 1:1112955/116‑1 (MQ=255) aaCTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAgg > 2:1112955/1‑116 (MQ=255) aaCTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTg > 4:585181/1‑132 (MQ=255) aaCTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTg < 3:585181/132‑1 (MQ=255) ccATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTAtcgt > 3:496391/1‑148 (MQ=255) tCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTg < 2:774974/110‑1 (MQ=255) tCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTg > 1:774974/1‑110 (MQ=255) aTAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGa > 4:822739/1‑88 (MQ=255) aTAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGa < 3:822739/88‑1 (MQ=255) tAACTTATTCAATATTCTCCAGCAAACCTCAGTGACCGCCATAATGGCGTTc < 1:223709/52‑1 (MQ=37) tAACTTATTCAATATTCTCCAGCAAACCTCAGTGACCGCCATAATGGCGTTc > 2:223709/1‑52 (MQ=37) tAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTg > 3:1141603/1‑115 (MQ=255) tAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTg < 2:853582/115‑1 (MQ=255) tAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTg > 1:853582/1‑115 (MQ=255) tAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGgc < 3:689756/121‑1 (MQ=255) tAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGgc > 4:689756/1‑121 (MQ=255) tAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTAt > 4:125643/1‑138 (MQ=255) aCTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGa > 3:1013456/1‑148 (MQ=255) aCTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTAGCGCATCGATTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGTGCAGTTGTTGCATCTATCGTCGGCATTGa > 3:954372/1‑148 (MQ=255) cTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTtgct > 3:348347/1‑127 (MQ=255) tATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTa < 4:385346/92‑1 (MQ=255) ttCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCa < 3:326695/148‑1 (MQ=255) tCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTtctc > 3:552948/1‑96 (MQ=255) tCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTtctc < 4:552948/96‑1 (MQ=255) aaTATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGgcg < 3:613658/102‑1 (MQ=255) aaTATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGgcg > 4:613658/1‑102 (MQ=255) atatTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCTACTTATCGGt < 3:749028/85‑1 (MQ=255) atatTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATc > 2:418022/1‑82 (MQ=255) atatTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATc < 1:418022/82‑1 (MQ=255) atatTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGt > 4:749028/1‑85 (MQ=255) atatTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTgg < 3:1087478/99‑1 (MQ=255) atatTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTgg > 4:1087478/1‑99 (MQ=255) taatctcCAGCAAACCTCAGTGAACGCCATGATGACGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCCCTGTTGGCGCTGACTGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATgcg < 4:954372/145‑1 (MQ=255) tctcCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGtt > 1:553276/1‑93 (MQ=255) tctcCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGtt < 2:553276/93‑1 (MQ=255) tctcCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCtg < 4:496391/148‑1 (MQ=255) ccAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGa > 1:866512/1‑50 (MQ=255) aGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTACCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGc > 4:615362/1‑148 (MQ=255) gCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGt < 3:933663/75‑1 (MQ=255) gCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGt > 4:933663/1‑75 (MQ=255) cAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTtc < 4:27905/80‑1 (MQ=255) cAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTtc > 3:27905/1‑80 (MQ=255) cAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTGTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGaa > 4:912059/1‑129 (MQ=255) cAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGaa < 3:912059/129‑1 (MQ=255) aaaCCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGt > 2:1087076/1‑148 (MQ=255) tCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTa < 1:293050/63‑1 (MQ=255) tCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTa > 2:293050/1‑63 (MQ=255) tCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGa > 4:642864/1‑88 (MQ=255) tCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGc < 4:428018/117‑1 (MQ=255) tCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGc > 3:428018/1‑117 (MQ=255) tCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCtggtgg > 2:497620/1‑139 (MQ=255) tCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCtggtgg > 2:682647/1‑139 (MQ=255) tCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCtggtgg < 1:682647/139‑1 (MQ=255) tCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCtggtgg < 1:497620/139‑1 (MQ=255) tCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCgctg > 4:946687/1‑148 (MQ=255) cAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCgctgc > 1:948501/1‑148 (MQ=255) gTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCgg > 3:241405/1‑113 (MQ=255) gTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCgg < 4:241405/113‑1 (MQ=255) | TTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGC > NC_000913/3935317‑3935595 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |