| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,385,206 | T→A | 5.1% | P456P (CCT→CCA) | yjeM → | putative transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,385,206 | 0 | T | A | 5.1% | 633.5 / 13.5 | 172 | P456P (CCT→CCA) | yjeM | putative transporter |
| Reads supporting (aligned to +/- strand): ref base T (79/84); new base A (4/5); total (83/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 177 total aligned reads displayed.
CGCGCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCC > NC_000913/4385062‑4385351 | cgcgCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCtgtg > 1:278448/1‑148 (MQ=255) cgcTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGt < 4:235154/148‑1 (MQ=255) tGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGa < 1:93244/148‑1 (MQ=255) cTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGc < 2:117234/148‑1 (MQ=255) ttCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCg > 2:200721/1‑148 (MQ=255) ttCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCg > 3:158511/1‑148 (MQ=255) ttCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCg > 4:333221/1‑148 (MQ=255) cccGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCgg > 3:407713/1‑147 (MQ=255) cccGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCgg < 4:114705/147‑1 (MQ=255) cccGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCgg < 4:407713/147‑1 (MQ=255) cGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGCTTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGgaga > 1:512428/1‑148 (MQ=255) cGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCgg < 1:157794/145‑1 (MQ=255) cGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGgaga > 3:891744/1‑148 (MQ=255) tCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTg < 4:221270/148‑1 (MQ=255) cTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTgg < 3:333221/148‑1 (MQ=255) ttAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTg < 4:419420/132‑1 (MQ=255) ttAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTg > 3:419420/1‑132 (MQ=255) ttAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCACAGGTTGaa < 1:361292/134‑1 (MQ=255) aaaGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACa > 2:9494/1‑148 (MQ=255) aaGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTg < 3:537435/142‑1 (MQ=255) aaGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTg > 4:537435/1‑142 (MQ=255) aGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCtgt < 1:11938/123‑1 (MQ=255) aGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCtgt > 2:11938/1‑123 (MQ=255) cACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTgaga > 2:915061/1‑142 (MQ=255) tCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGCTTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATtg < 2:512428/148‑1 (MQ=255) cAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCtg > 1:1003216/1‑115 (MQ=255) cAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGcac < 3:578325/143‑1 (MQ=255) cAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGcac > 4:578325/1‑143 (MQ=255) gATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGga < 3:1124113/148‑1 (MQ=255) gATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGga > 3:92725/1‑148 (MQ=255) tcGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGgatgat > 3:211392/1‑148 (MQ=255) cGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCACAGGTTGaa < 2:267675/115‑1 (MQ=255) gACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACAGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTggcgg > 2:878489/1‑148 (MQ=255) cGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGccc < 1:9494/148‑1 (MQ=255) gTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCt > 1:880059/1‑148 (MQ=255) tttGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTg > 3:672779/1‑148 (MQ=255) tttGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTg > 4:416905/1‑148 (MQ=255) ttGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGt < 2:278448/148‑1 (MQ=255) gtgATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGtct < 3:416905/148‑1 (MQ=255) ttttCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGtcttctt < 4:92725/148‑1 (MQ=255) ttttCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCACAGGTTGa > 2:737697/1‑97 (MQ=255) tttCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGa < 4:56514/96‑1 (MQ=255) tttCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGa > 3:56514/1‑96 (MQ=255) tttCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGgag > 1:820176/1‑104 (MQ=255) tCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATtg < 4:455857/119‑1 (MQ=255) tCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATtg > 3:455857/1‑119 (MQ=255) aaCGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTg > 3:578717/1‑148 (MQ=255) cGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGtt > 2:785076/1‑148 (MQ=255) cGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGtt > 3:265050/1‑148 (MQ=255) cGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGtt < 4:672779/148‑1 (MQ=255) tttGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCg < 4:578717/148‑1 (MQ=255) tGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGAt < 4:265050/148‑1 (MQ=255) tCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGcc > 4:861067/1‑84 (MQ=255) gCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTggc > 4:181796/1‑114 (MQ=255) aTGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACt < 1:480276/85‑1 (MQ=255) aTGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGAttt > 3:584686/1‑148 (MQ=255) aTGATTGCGACAGCGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACt > 2:480276/1‑85 (MQ=255) gATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGgatgat < 1:746188/105‑1 (MQ=255) gATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTAc > 3:21753/1‑148 (MQ=255) tGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTg > 4:1095663/1‑68 (MQ=255) ttGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTggg > 4:657355/1‑72 (MQ=255) tCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGcagcag < 4:584686/148‑1 (MQ=255) gtgttccggtggtGAACATTTG‑GAACCTCTTTACCATTCTTCAACCTTTGGTTTAAGCCGGAGGCTGGGGCAACCCATTGTGGATTAATGGCCGCCCTGTCTTCTTTTTGCTTGTAGGCATGGCGATTTACCAGAACTATTGcagcag < 4:21753/141‑1 (MQ=255) tACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCg > 2:1089794/1‑116 (MQ=255) tACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCg < 1:1089794/116‑1 (MQ=255) aCTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTg > 3:319956/1‑148 (MQ=255) tggtg‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGtctt > 1:929691/1‑94 (MQ=255) tggtg‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGtctt < 2:929691/94‑1 (MQ=255) gtg‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGga > 3:717297/1‑73 (MQ=255) gtg‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCaaaaa > 2:708152/1‑148 (MQ=255) g‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGt > 3:224486/1‑39 (MQ=255) aCATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCg > 1:795720/1‑96 (MQ=255) aCATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCg < 2:795720/96‑1 (MQ=255) aCATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATc > 3:298340/1‑148 (MQ=255) aTTTGCGAACATCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTAcc > 3:668491/1‑116 (MQ=255) tttGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTAt > 1:902176/1‑123 (MQ=255) tGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAg < 1:226539/148‑1 (MQ=255) aaCGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGtcttc < 2:901657/81‑1 (MQ=255) aaCGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGtct < 1:333521/79‑1 (MQ=255) aaCGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTggg > 2:763609/1‑148 (MQ=255) aaCGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACACCACATTGTGGATGATTGGCGGCCCTGtct > 2:333521/1‑79 (MQ=255) aCGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGc > 2:276904/1‑148 (MQ=255) gTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCgg < 4:677781/148‑1 (MQ=255) tCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATg > 3:616723/1‑95 (MQ=255) tCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTa > 2:1017864/1‑100 (MQ=255) tCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTa < 1:1017864/100‑1 (MQ=255) tCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTg < 2:655429/112‑1 (MQ=255) ccATCATTCAACCTGTGGTTGAAGCCCGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGaa < 3:772684/103‑1 (MQ=255) catcatTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGtt < 1:642715/81‑1 (MQ=255) atcatTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATtgt > 2:380768/1‑46 (MQ=255) atcatTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTgca < 1:393481/109‑1 (MQ=255) atcatTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTgca > 2:393481/1‑109 (MQ=255) atcatTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGt > 4:767699/1‑140 (MQ=255) atTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCg < 4:319956/148‑1 (MQ=255) ttCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGc < 1:636497/133‑1 (MQ=255) ttCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGc > 2:636497/1‑133 (MQ=255) aCCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGcc < 4:298340/148‑1 (MQ=255) ccTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGccc < 1:708152/148‑1 (MQ=255) cTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGAt > 1:14640/1‑82 (MQ=255) cTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGAt < 2:14640/82‑1 (MQ=255) | CGCGCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTG‑ACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCC > NC_000913/4385062‑4385351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |