| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,268,694 | T→A | 7.1% | L177Q (CTG→CAG) | kdsA → | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,268,694 | 0 | T | A | 7.1% | 298.0 / 11.0 | 85 | L177Q (CTG→CAG) | kdsA | 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate synthase |
| Reads supporting (aligned to +/- strand): ref base T (40/39); new base A (3/3); total (43/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.87e-01 | |||||||||||
TCAAGAAACCACAGTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCTTCCGGTGGTCGTCGTGCTCAGGTGGCTGAGCTGGCAC > NC_000913/1268574‑1268840 | tCAAGAAACCACAGTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCAt > 2:941320/1‑148 (MQ=255) cAAGAAACCACAGTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCAtt > 2:1124597/1‑148 (MQ=255) cAAGAAACCACAGTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCAtt < 1:1124597/148‑1 (MQ=255) aCCACAGTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCa > 3:563977/1‑140 (MQ=255) aCCACAGTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCa < 4:563977/140‑1 (MQ=255) cacaGTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATgaagaa > 4:678639/1‑148 (MQ=255) cacaGTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATgaagaa < 1:941320/148‑1 (MQ=255) acaGTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGaaa > 2:883284/1‑148 (MQ=255) caGTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAg > 1:73900/1‑148 (MQ=255) gTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGGTAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAgtg < 4:499317/148‑1 (MQ=255) gTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAgtg < 2:73900/148‑1 (MQ=255) ttGTCAGCCCGGGATAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCt > 4:1093598/1‑106 (MQ=255) ttGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCt < 3:1093598/106‑1 (MQ=255) tCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAgtg > 1:296239/1‑143 (MQ=255) tCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAgtg < 2:296239/143‑1 (MQ=255) ccGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTa < 1:824112/145‑1 (MQ=255) ccGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTa > 2:824112/1‑145 (MQ=255) gATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTg > 2:635356/1‑148 (MQ=255) gATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTg < 1:883284/148‑1 (MQ=255) gTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATga > 3:639156/1‑117 (MQ=255) gTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATga < 4:639156/117‑1 (MQ=255) gTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGAtttt < 3:678639/148‑1 (MQ=255) atCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTc > 2:141755/1‑102 (MQ=255) atCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTc < 1:141755/102‑1 (MQ=255) atCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTa > 3:480894/1‑109 (MQ=255) atCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTa < 4:480894/109‑1 (MQ=255) tGATAAATTCGAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTg > 1:837289/1‑119 (MQ=255) tGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTg < 2:837289/119‑1 (MQ=255) aaaTTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATg < 3:382751/84‑1 (MQ=255) aaaTTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATg > 4:382751/1‑84 (MQ=255) aaTTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGt > 4:513650/1‑127 (MQ=255) aaTTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGt < 3:513650/127‑1 (MQ=255) ttCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTAt < 4:1108789/98‑1 (MQ=255) ttCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTAt > 3:1108789/1‑98 (MQ=255) ttCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCAGGTTGTcat > 4:94814/1‑75 (MQ=255) ttCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCAGGTTGTcat < 3:94814/77‑3 (MQ=255) tCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTg < 2:985409/125‑1 (MQ=255) tCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTg > 1:985409/1‑125 (MQ=255) tCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGAt > 1:707101/1‑127 (MQ=255) tCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGAt < 2:707101/127‑1 (MQ=255) tCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACt > 3:571588/1‑148 (MQ=255) tCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACt > 3:438354/1‑148 (MQ=255) agaagGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCt > 2:871197/1‑63 (MQ=255) agaagGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCt < 1:871197/63‑1 (MQ=255) agaagGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTc < 3:900978/85‑1 (MQ=255) agaagGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTc > 4:900978/1‑85 (MQ=255) gcAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCAGGTTGTcat > 4:96823/1‑62 (MQ=255) gcAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCAGGTTGTcat < 3:96823/64‑3 (MQ=255) cAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCt < 2:1005936/97‑1 (MQ=255) cAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCt > 1:1005936/1‑97 (MQ=255) aCGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTc < 3:1139023/74‑1 (MQ=255) aCGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTc > 4:1139023/1‑74 (MQ=255) aCGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCAt > 2:163176/1‑79 (MQ=255) aCGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCAt < 1:163176/79‑1 (MQ=255) aaaaaGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGAt < 4:685500/109‑1 (MQ=255) aaaaaGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGAt > 3:685500/1‑109 (MQ=255) aaaaaGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGtt < 4:438354/148‑1 (MQ=255) aaaaGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTc < 3:850237/90‑1 (MQ=255) aaaaGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTc > 4:850237/1‑90 (MQ=255) aaaaGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTc < 1:718019/90‑1 (MQ=255) aaaaGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTc > 2:718019/1‑90 (MQ=255) aGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCAtt < 1:415335/73‑1 (MQ=255) aGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCAtt > 2:415335/1‑73 (MQ=255) aTTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGa > 4:940765/1‑107 (MQ=255) aTTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGa < 3:940765/107‑1 (MQ=255) ttGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCTATGCCGCGa < 3:69499/129‑1 (MQ=255) ttGCGATCGCGGTGCTAACTTCCGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGa > 4:69499/1‑129 (MQ=255) cGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCTTCCggt < 1:635356/148‑1 (MQ=255) gATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTaa > 2:490999/1‑80 (MQ=255) gATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTaa < 1:490999/80‑1 (MQ=255) aTCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCa > 3:649770/1‑110 (MQ=255) aTCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCa < 4:649770/110‑1 (MQ=255) tCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCTTCCggtggt > 2:659494/1‑148 (MQ=255) aCTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCTTCCGGTGGTCGTCGTGCTCa < 1:659494/148‑1 (MQ=255) tCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCtt > 2:1064530/1‑126 (MQ=255) tCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCtt < 1:1064530/126‑1 (MQ=255) aTGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGt > 3:168315/1‑108 (MQ=255) aTGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGt < 4:168315/108‑1 (MQ=255) tGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTg > 2:82848/1‑79 (MQ=255) tGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTg < 1:82848/79‑1 (MQ=255) gACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCaa > 3:8923/1‑93 (MQ=255) gACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCaa < 4:8923/93‑1 (MQ=255) gACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCTTCCGGTGgtcgt < 4:1009997/129‑1 (MQ=255) gACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCTTCCGGTGgtcgt > 3:1009997/1‑129 (MQ=255) gACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCTTCCGGTGGTCGTCGTGCTCAGGTGGCTGAGc > 4:997670/1‑148 (MQ=255) cAACCAGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCTTCCGGTGGTCGTCGTGCTCAGGTgg < 4:318694/140‑1 (MQ=255) cAACCAGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCTTCCGGTGGTCGTCGTGCTCAGGTgg > 3:318694/1‑140 (MQ=255) aaCCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCTTCCGGTGGTCGTCGTGCTCAGGTGGCTGAGCTgg < 4:571588/148‑1 (MQ=255) cTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCTTCCGGTGGTCGTCGTGCTCAGGTGGCTGAGCTGGCAc > 4:569354/1‑148 (MQ=255) | TCAAGAAACCACAGTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCTTCCGGTGGTCGTCGTGCTCAGGTGGCTGAGCTGGCAC > NC_000913/1268574‑1268840 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |