| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,509,246 | A→G | 7.7% | intergenic (‑182/‑40) | yncJ ← / → hicA | uncharacterized protein/mRNA interferase toxin of the HicAB toxin‑antitoxin system |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,509,246 | 0 | A | G | 7.7% | 250.2 / 9.5 | 78 | intergenic (‑182/‑40) | yncJ/hicA | uncharacterized protein/mRNA interferase toxin of the HicAB toxin‑antitoxin system |
| Reads supporting (aligned to +/- strand): ref base A (37/35); new base G (3/3); total (40/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.92e-02 | |||||||||||
TCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATGGGAGGCGCAGTGTC > NC_000913/1509105‑1509387 | tCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTa < 3:199347/148‑1 (MQ=255) tttCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGt < 4:716477/142‑1 (MQ=255) tttCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGt > 3:716477/1‑142 (MQ=255) cTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttgt < 4:691309/148‑1 (MQ=255) aGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTa < 3:1098461/138‑1 (MQ=255) aGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTa > 4:1098461/1‑138 (MQ=255) ttattaTTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttgt > 3:628229/1‑141 (MQ=255) tcattattCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttgt < 4:628229/139‑1 (MQ=255) tattCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTTCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACTCACGGAGGTAAACACTAATGTTTACTttgt < 4:699963/137‑1 (MQ=255) tattCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTCCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttgt > 3:699963/1‑137 (MQ=255) tCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttgt > 1:157019/1‑134 (MQ=255) tCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttgt < 2:157019/134‑1 (MQ=255) tCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTc < 1:119395/144‑1 (MQ=255) tCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTc > 2:119395/1‑144 (MQ=255) aaaTTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTaa > 3:761725/1‑112 (MQ=255) aaaTTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTaa < 4:696894/112‑1 (MQ=255) aaaTTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTaa > 3:696894/1‑112 (MQ=255) aaaTTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTaa < 4:761725/112‑1 (MQ=255) aaGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttgttg > 2:937291/1‑115 (MQ=255) aaGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttgttg < 1:937291/115‑1 (MQ=255) gAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGAtg > 1:1052592/1‑139 (MQ=255) gAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGAtg < 2:1052592/139‑1 (MQ=255) cTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTc < 3:662053/115‑1 (MQ=255) cTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTc > 4:662053/1‑115 (MQ=255) ggAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGa < 2:1084792/124‑1 (MQ=255) ggAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGa > 1:1084792/1‑124 (MQ=255) aTCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGaa > 1:937144/1‑132 (MQ=255) aTCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGaa < 2:937144/132‑1 (MQ=255) aTTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAg < 1:896188/125‑1 (MQ=255) aTTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAg > 2:896188/1‑125 (MQ=255) ttgcattgcaTTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttg > 4:524783/1‑83 (MQ=255) ttgcattgcaTTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTttg < 3:524783/83‑1 (MQ=255) ttgcattCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACATTAGTGTTTAcctc < 3:314611/77‑4 (MQ=39) ttgcattCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACATTAGTGTTTAcctc > 4:314611/1‑74 (MQ=39) ttgcattCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACATTAGTGTTTAcctc < 1:785751/77‑4 (MQ=39) ttgcattCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACATTAGTGTTTAcctc > 2:785751/1‑74 (MQ=39) ttgcattCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGa < 2:537038/82‑1 (MQ=255) ttgcattCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGa > 1:537038/1‑82 (MQ=255) gCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTa > 2:32696/1‑148 (MQ=255) ttGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGaa > 2:538239/1‑98 (MQ=255) ttGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGaa < 1:538239/98‑1 (MQ=255) tGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAAtctc > 1:361239/1‑129 (MQ=255) tGCGGCGATTTAGTGCTATTGTCGAACAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCATGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAAtctc < 2:361239/129‑1 (MQ=255) cgATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGa < 4:570624/142‑1 (MQ=255) cgATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGa > 3:570624/1‑142 (MQ=255) ttAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGt < 1:884288/99‑1 (MQ=255) ttAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGt > 2:884288/1‑99 (MQ=255) tGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCAt < 1:32696/148‑1 (MQ=255) gCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGa > 2:338064/1‑72 (MQ=255) gCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGa < 1:338064/72‑1 (MQ=255) gCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAAtct < 2:169242/114‑1 (MQ=255) gCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAAtct > 1:169242/1‑114 (MQ=255) aTTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGa > 4:127336/1‑148 (MQ=255) ttACACACGGAGGTAAACACTAATGTTTATTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCa < 3:907396/141‑1 (MQ=255) ttACACACGGAGGTAAACACTAATGTTTATTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCa > 4:907396/1‑141 (MQ=255) ttACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACaa > 1:457433/1‑71 (MQ=255) ttACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACaa < 2:457433/71‑1 (MQ=255) ttACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGaa > 4:413922/1‑136 (MQ=255) ttACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGaa < 3:413922/136‑1 (MQ=255) cGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGa < 2:468280/76‑1 (MQ=255) cGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGa > 1:468280/1‑76 (MQ=255) cGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGt < 2:708543/99‑1 (MQ=255) cGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGt > 1:708543/1‑99 (MQ=255) cGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATg > 3:143670/1‑143 (MQ=255) cGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATg < 4:143670/143‑1 (MQ=255) gAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGAAACCATTTGAAACTCAGGTTTCATGGGAGgcg > 4:684248/1‑148 (MQ=255) aaagTAAACATTAGTGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATg > 3:976947/4‑141 (MQ=255) aaactAAACATTAGTGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATg < 4:976947/137‑1 (MQ=255) aGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCAtt > 3:706939/1‑122 (MQ=255) aGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCAtt < 4:706939/122‑1 (MQ=255) aGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATg < 4:134768/140‑1 (MQ=255) aGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATg > 3:134768/1‑140 (MQ=255) ggTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTGTCATGGGTGacgcg > 4:504702/1‑147 (MQ=255) acacTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATg < 4:635765/134‑1 (MQ=255) acacTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATg > 3:635765/1‑134 (MQ=255) acacTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATGGGAGGCGCAGTGTc > 3:1095843/1‑148 (MQ=255) cTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAAtct > 4:335984/1‑79 (MQ=255) cTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAAtct < 3:335984/79‑1 (MQ=255) cTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAAt > 2:1012162/1‑100 (MQ=255) cTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAAt < 1:1012162/100‑1 (MQ=255) cTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATGGGAGGCGCa < 2:372704/140‑1 (MQ=255) cTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATGGGAGGCGCa > 1:372704/1‑140 (MQ=255) aaTGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCaa < 4:48943/106‑1 (MQ=255) aaTGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCaa > 3:48943/1‑106 (MQ=255) | TCGTTTCTTGAGGTTATTATTCAGTTTTGCAAATTAGCGCAAAGAAATTCTGGAATCTTCCTTCCTGATTTTGCATTGCATTCTGCCGTTGCGGCGATTTAGTGCTATTTTCGAGCAAATTACACACGGAGGTAAACACTAATGTTTACTTTGTTGATATACTCAGCGGCAGGGAGGCGATGTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATGGGAGGCGCAGTGTC > NC_000913/1509105‑1509387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |