| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,220,357 | G→C | 6.3% | L545V (CTG→GTG) | bglX ← | beta‑D‑glucoside glucohydrolase, periplasmic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,220,357 | 0 | G | C | 6.3% | 395.7 / 13.5 | 111 | L545V (CTG→GTG) | bglX | beta‑D‑glucoside glucohydrolase, periplasmic |
| Reads supporting (aligned to +/- strand): ref base G (53/51); new base C (4/3); total (57/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 | |||||||||||
Only 100 of 121 total aligned reads displayed.
GACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTC > NC_000913/2220215‑2220499 | gACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCACCGGta > 4:93292/1‑147 (MQ=255) aCGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGttt > 1:215562/1‑148 (MQ=255) ggTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTAcc < 3:926852/148‑1 (MQ=255) tCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCACCGGTAAACCGCTgg < 2:1040440/145‑1 (MQ=255) tCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCACCGGTAAACCGCTgg > 1:1040440/1‑145 (MQ=255) cGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCCCCAGCGCCAGCGGACGCCCGTTCATCAGCaccagcaccagc > 4:979634/1‑131 (MQ=255) aaaCAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCgg < 2:66022/129‑1 (MQ=255) aaaCAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCgg > 1:66022/1‑129 (MQ=255) aaCAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCgg > 1:1112976/1‑128 (MQ=255) cAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCgg > 1:88185/1‑134 (MQ=255) cGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCaa > 4:1143857/1‑148 (MQ=255) cAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCg < 4:797881/122‑1 (MQ=255) cAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCg > 3:797881/1‑122 (MQ=255) cGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTg < 4:493028/148‑1 (MQ=255) ccTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGt > 4:174260/1‑102 (MQ=255) cAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTc > 1:276716/1‑130 (MQ=255) cAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTc < 2:276716/130‑1 (MQ=255) tCCCCGCAAAGCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGt > 3:747937/1‑148 (MQ=255) ccccGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTg < 3:1143857/148‑1 (MQ=255) ccGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGc > 1:584895/1‑103 (MQ=255) cGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCACCGGTAAACCGCTg < 2:845696/100‑1 (MQ=255) cGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCACCGGTAAACCGCTg > 1:845696/1‑100 (MQ=255) gCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCACCGGtaaa > 1:1021169/1‑90 (MQ=255) gCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCACCGGtaaa < 2:1021169/93‑4 (MQ=255) ccAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGcgcc > 4:327692/1‑106 (MQ=255) ccAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGcgcc < 3:327692/106‑1 (MQ=255) aGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGtt < 1:238337/84‑1 (MQ=255) aGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGtt > 2:238337/1‑84 (MQ=255) aGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCg > 2:372049/1‑148 (MQ=255) gTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCttt < 4:844081/124‑1 (MQ=255) ccAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGa < 1:1007783/148‑1 (MQ=255) aGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAgg > 3:475030/1‑148 (MQ=255) gAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGc > 1:1066602/1‑148 (MQ=255) aTCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCtt < 2:1066602/148‑1 (MQ=255) aTCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCtt > 4:910061/1‑148 (MQ=255) aTCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCtt < 1:372049/148‑1 (MQ=255) cATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTg < 4:475030/148‑1 (MQ=255) aTCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCaccagcaccagc < 3:1115614/64‑1 (MQ=255) aTCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCaccagcaccagc > 4:1115614/1‑64 (MQ=255) tCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCtt > 1:447430/1‑79 (MQ=255) aGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACg < 4:594516/99‑1 (MQ=255) gctgATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGc > 2:41515/1‑99 (MQ=255) gctgATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGc < 1:41515/99‑1 (MQ=255) gctgATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGa > 1:84718/1‑114 (MQ=255) gctgATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGa < 2:84718/114‑1 (MQ=255) gctgATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATccc < 1:1001251/148‑1 (MQ=255) tgATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCt < 2:215562/148‑1 (MQ=255) aTCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATcc < 2:373867/143‑1 (MQ=255) aTCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCtgt > 3:270589/1‑148 (MQ=255) tcttctTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCgg > 1:51458/1‑53 (MQ=255) tcttctTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCgg < 2:51458/53‑1 (MQ=255) tcttctTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTg > 4:417837/1‑134 (MQ=255) tcttctTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTg < 3:417837/134‑1 (MQ=255) cttcttTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTg < 2:734628/133‑1 (MQ=255) tcttTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCtgtg < 2:1090823/145‑1 (MQ=255) tcttTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCtt > 3:132519/1‑148 (MQ=255) tcttTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCtt > 3:271971/1‑148 (MQ=255) cttTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTc < 3:910061/148‑1 (MQ=255) ttCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCaa > 2:860261/1‑73 (MQ=255) ttCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCaa < 1:860261/73‑1 (MQ=255) ttCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTgg > 2:353443/1‑118 (MQ=255) ttCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTgg < 1:353443/118‑1 (MQ=255) ttCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCt < 4:510799/123‑1 (MQ=255) ttCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCt > 3:510799/1‑123 (MQ=255) ccagcgccagcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCttt < 2:249765/58‑1 (MQ=255) ccagcgccagcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGAc > 1:56146/1‑148 (MQ=255) cagcgccagcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCa < 2:1106268/67‑1 (MQ=255) cagcgccagcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCa > 1:1106268/1‑67 (MQ=255) cagcgccagcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACt < 4:132519/148‑1 (MQ=255) agcgccagcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCttt > 2:480597/1‑56 (MQ=255) agcgccagcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCttt < 1:480597/56‑1 (MQ=255) gccagcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAg < 2:56146/148‑1 (MQ=255) agcgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGcca < 1:291394/148‑1 (MQ=255) cgGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCa > 3:413812/1‑62 (MQ=255) cGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGa < 2:217071/133‑1 (MQ=255) cGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGa > 1:217071/1‑133 (MQ=255) gCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCCGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCcaccaccac < 4:747937/148‑1 (MQ=255) cccGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGata < 3:987900/85‑1 (MQ=255) cccGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCAt > 4:413546/1‑114 (MQ=255) cccGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCAt < 3:413546/114‑1 (MQ=255) cGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATa > 4:345772/1‑77 (MQ=255) cGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATc > 1:316829/1‑148 (MQ=255) cGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATc > 1:705540/1‑148 (MQ=255) cGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATc > 4:887445/1‑148 (MQ=255) gTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCa < 4:270589/148‑1 (MQ=255) ttCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCg < 3:157557/89‑1 (MQ=255) tcaGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGa > 4:861485/1‑68 (MQ=255) tcaGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGa < 3:861485/68‑1 (MQ=255) cagcaccagcacCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACAt > 1:530408/1‑140 (MQ=255) cagcaccagcacCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACAt < 2:530408/140‑1 (MQ=255) cagcaccagcacCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGt < 2:559181/148‑1 (MQ=255) gcaccagcaccaGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGatat < 3:881929/75‑1 (MQ=255) gcaccagcaccaGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGttt < 3:887445/148‑1 (MQ=255) gcaccagcaccaGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTCCTTCACCGACTACAGCCACCACCACATCAGATTGttt > 3:740343/1‑148 (MQ=255) caccagcaccagCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTc > 1:782135/1‑148 (MQ=255) accagcaccagcGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCg < 3:645390/148‑1 (MQ=255) caccagcGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTc > 3:185660/1‑148 (MQ=255) caccagcGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTGTCGCCGTc > 2:970010/1‑148 (MQ=255) agcagcGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGa > 4:761141/3‑134 (MQ=255) accagcGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGa < 3:761141/134‑1 (MQ=255) | GACGGGTTGTAATCGCCAAACAATACATCGGCAATTGCATTACCGCCTTCAGTCCCCGCAAACCAGGTTTCCAGAATCGCATCAGCCTGCTGATCTTCTTTCACCAGCGCCAGCGGACGCCCGTTCATCAGCACCAGCACCAGCGGTTTACCGGTGGCTTTCAGCGCCGCAATCAAGTCACGTTGGCTTTGCGGAATAGTGATATCGGTCCGGCTGGAGGCTTCGTGCGCCATCCCCTGTGCTTCACCGACTACAGCCACCACCACATCAGATTGTTTCGCCGTC > NC_000913/2220215‑2220499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |