Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,638,584 A→T 11.8% F23L (TTT→TTA bamB ← BamABCDE complex OM biogenesis lipoprotein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,638,5840AT11.8% 210.7 / 18.1 68F23L (TTT→TTAbamBBamABCDE complex OM biogenesis lipoprotein
Reads supporting (aligned to +/- strand):  ref base A (31/29);  new base T (4/4);  total (35/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.25e-01

ACAACGTTGTCCGCCAGTGCCGGATGAAGATTGGAATAGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCTGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTT  >  NC_000913/2638438‑2638728
                                                                                                                                                  |                                                                                                                                                
aCAACGTTGTCCGCCAGTGCCGGATGAAGATTGGAATAGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTaa                                                                                                                                                 >  1:265563/1‑148 (MQ=255)
   aCGTTGTCCGCCAGTGCCGGATGAAGATTGGAATAGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACa                                                                                                                                              >  3:92564/1‑148 (MQ=255)
           cGCCAGTGCCGGATGAAGATTGGAATAGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAg                                                                                                                                      <  4:92564/148‑1 (MQ=255)
           cGCCAGTGCCGGATGAAGATTGGAATAGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAg                                                                                                                                      <  2:265563/148‑1 (MQ=255)
                            gATTGGAATAGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAAc                                                                                                                                               <  3:786769/122‑1 (MQ=255)
                            gATTGGAATAGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAAc                                                                                                                                               >  2:1069595/1‑122 (MQ=255)
                            gATTGGAATAGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAAc                                                                                                                                               <  1:1069595/122‑1 (MQ=255)
                            gATTGGAATAGAAGTTGCAAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAAc                                                                                                                                               >  4:786769/1‑122 (MQ=255)
                                   aTAGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAg                                                                                                                                             >  4:680848/1‑117 (MQ=255)
                                   aTAGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAg                                                                                                                                             <  3:680848/117‑1 (MQ=255)
                                    tAGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTTAACAGCGa                                                                                                                                          >  4:314425/1‑119 (MQ=255)
                                    tAGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTTAACAGCGa                                                                                                                                          <  3:314425/119‑1 (MQ=255)
                                     aGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAg                                                                                                                           <  2:990213/133‑1 (MQ=255)
                                     aGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAg                                                                                                                           >  1:990213/1‑133 (MQ=255)
                                          ttGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACg                                                                                                                    >  2:935734/1‑135 (MQ=255)
                                          ttGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACg                                                                                                                    <  1:935734/135‑1 (MQ=255)
                                               aaTGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTaa                                                                                                                                                 >  4:351578/1‑101 (MQ=255)
                                               aaTGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTaa                                                                                                                                                 <  3:351578/101‑1 (MQ=255)
                                               aaTGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTTAACAGCGa                                                                                                                                          <  1:216982/108‑1 (MQ=255)
                                               aaTGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTTAACAGCGa                                                                                                                                          >  2:216982/1‑108 (MQ=255)
                                               aaTGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACa                                                                                                                                              <  3:278872/104‑1 (MQ=255)
                                               aaTGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACa                                                                                                                                              >  4:278872/1‑104 (MQ=255)
                                                       tACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGaa                                                                                                                 >  4:1051234/1‑125 (MQ=255)
                                                       tACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGAAACGGaa                                                                                                                 <  3:1051234/125‑1 (MQ=255)
                                                         ccAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTg                                                                                                       >  4:163907/1‑133 (MQ=255)
                                                         ccAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTg                                                                                                       <  3:163907/133‑1 (MQ=255)
                                                            aCGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGGCATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTaa                                                                                             <  3:77272/140‑1 (MQ=255)
                                                            aCGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTaaa                                                                                                                                                <  2:468782/89‑1 (MQ=255)
                                                            aCGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTaaa                                                                                                                                                >  1:468782/1‑89 (MQ=255)
                                                            aCGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAAc                                                                                                                                               <  4:814174/90‑1 (MQ=255)
                                                            aCGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAAc                                                                                                                                               >  3:814174/1‑90 (MQ=255)
                                                            aCGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTaa                                                                                             >  4:77272/1‑140 (MQ=255)
                                                                       ccACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTATCGGAAAGCAGTCCTGGCAGCAGTa                                                                                              >  3:724211/1‑128 (MQ=255)
                                                                       ccACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTa                                                                                              <  4:724211/128‑1 (MQ=255)
                                                                        cACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGTACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGcc                                                                                                                                    >  1:1127202/1‑89 (MQ=255)
                                                                        cACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGcc                                                                                                                                    <  2:1127202/89‑1 (MQ=255)
                                                                        cACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGt                                                                                                           <  4:437467/114‑1 (MQ=255)
                                                                        cACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGt                                                                                                           >  3:437467/1‑114 (MQ=255)
                                                                          cGCCGTGGTCGGCGTAAACTGGTTTTCGACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTcc                                                                       >  4:846049/1‑148 (MQ=255)
                                                                          cGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCa                                                                                                             >  3:8973/1‑110 (MQ=255)
                                                                          cGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAAAGGAAAGCa                                                                                                             <  4:8973/110‑1 (MQ=255)
                                                                                          aaCTGGTTTTCGACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACaaa                                                       <  3:846049/148‑1 (MQ=255)
                                                                                              ggTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTaaa                                                                                                                                                <  3:105209/55‑1 (MQ=255)
                                                                                              ggTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTaaa                                                                                                                                                >  4:105209/1‑55 (MQ=255)
                                                                                              ggTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGaaa                                                                                                                <  4:902897/87‑1 (MQ=255)
                                                                                              ggTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGaaa                                                                                                                >  3:902897/1‑87 (MQ=255)
                                                                                              ggTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAattat                                                   >  2:237323/1‑148 (MQ=255)
                                                                                                   tCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAAtt                                              >  1:172447/1‑148 (MQ=255)
                                                                                                    cAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTa                                                                                         >  3:751379/1‑104 (MQ=255)
                                                                                                    cAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTa                                                                                         <  4:751379/104‑1 (MQ=255)
                                                                                                      aCGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTg                                                                                 >  1:415946/1‑110 (MQ=255)
                                                                                                      aCGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTg                                                                                 <  2:415946/110‑1 (MQ=255)
                                                                                                             gCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGc                                                                                                              >  1:936371/1‑74 (MQ=255)
                                                                                                             gCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGc                                                                                                              <  2:936371/74‑1 (MQ=255)
                                                                                                             gCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCTGca                                    <  1:237323/148‑1 (MQ=255)
                                                                                                                     gACATCTTTACCACATCTTCTTCGCTGTTAAACTGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCAt                                                                              >  2:442479/1‑98 (MQ=255)
                                                                                                                     gACATCTTTACCACATCTTCTTCGCTGTTAAACTGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCAt                                                                              <  1:442479/98‑1 (MQ=255)
                                                                                                                           tttACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGAt                                                              <  3:703996/108‑1 (MQ=255)
                                                                                                                           tttACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGAt                                                              >  4:703996/1‑108 (MQ=255)
                                                                                                                                cacaTCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGa                                                               <  1:928216/102‑1 (MQ=255)
                                                                                                                                cacaTCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGa                                                               >  2:928216/1‑102 (MQ=255)
                                                                                                                                cacaTCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCTGCATCATTTCGCTCAGTGCCgg                 <  2:172447/148‑1 (MQ=255)
                                                                                                                                 acaTCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAatt                                                     >  2:992973/1‑111 (MQ=255)
                                                                                                                                 acaTCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAatt                                                     <  1:992973/111‑1 (MQ=255)
                                                                                                                                     cttcttCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCTGCATCATTTCGCTCAGTGCCGGAGTaa            >  1:114005/1‑148 (MQ=255)
                                                                                                                                        cttcGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCTGCATCATTTCGCTCAGTGCCGGAGTAACAt         >  2:199817/1‑148 (MQ=255)
                                                                                                                                         ttcGCTGTTTAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCTGCATCATTTCGCTCAGTGCCgg                 >  4:642855/1‑139 (MQ=255)
                                                                                                                                         ttcGCTGTTTAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCTGCATCATTTCGCTCAGTGCCgg                 <  3:642855/139‑1 (MQ=255)
                                                                                                                                          tcGCTGTTTAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAAttatta                                                 <  1:228875/106‑1 (MQ=255)
                                                                                                                                          tcGCTGTTTAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAAttatta                                                 >  2:228875/1‑106 (MQ=255)
                                                                                                                                          tcGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAAt                                               <  1:196278/108‑1 (MQ=255)
                                                                                                                                          tcGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAAt                                               >  2:196278/1‑108 (MQ=255)
                                                                                                                                          tcGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTc                                           <  3:1051269/112‑1 (MQ=255)
                                                                                                                                          tcGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTc                                           >  4:1051269/1‑112 (MQ=255)
                                                                                                                                               gTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCTGCATCATTTCGCTCAGTGCCGGAGTAACATCGCtttt  >  4:1107811/1‑148 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
ACAACGTTGTCCGCCAGTGCCGGATGAAGATTGGAATAGAAGTTGCCAATGCCGCTACCAACGGAAGTGCTCCACGCCGTGGTCGGCGTAAACTGGTTTTCAACGGTTGGCAATGGGGACATCTTTACCACATCTTCTTCGCTGTTAAACAGCGAACAGCCGCTTAAAAGGGTAACGGAAAGCAGTCCTGGCAGCAGTAATTTACGCAATTGCATCGGGTCCCTCTCAGATGGACAAATTATTAATTTTCATCTGCATCATTTCGCTCAGTGCCGGAGTAACATCGCTTTT  >  NC_000913/2638438‑2638728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: