New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 3484544 = | 164 (0.950) | 4 (0.020) | 4/492 | 14.2 | 2.5% | coding (55/870 nt) | prkB | putative phosphoribulokinase |
? | NC_000913 | = 3484540 | 161 (0.980) | coding (51/870 nt) | prkB | putative phosphoribulokinase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
AATGTCCCCGGTACCTGATTCCACGGTACGGCTTCGTCGTAGGTATGCAGATATTTGCGAGATTTCCCTTTGCCGCTCTGACCGTATTCAATGAAGGTTTGTTCCAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3484830‑3484544 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtggtggtCCCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGCTCCGACCATACCAGCACCGCTTCTCCGCACTGTAGCTGGCGTTTGACGTCGGCGACTTTCTGTTCAAGTGTACGCTCATGTTCACCATAATCGGTGCCTTCACGTAACACAAAGCTTTCA < NC_000913/3484540‑3484268 AATGTCCCCGGTACCTGATTCCACGGTACGGCTTCGTCGTAGGTATGCAGATATTTGCGAGATTTCCCTTTGCCGCTCTGACCGTATTCAATGAAGGTTTGTTCCAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCCGTTTTAACTGCGCGCATATTTTACGAAACGCGAGGCT > 2:740537/1‑278 CCCCGGTACCTGATTCCACGGTACGGCTTCGTCGTAGGTATGCAGTTATTTGCGAGATTTCCCTTTGCCGCTCTGACCGTATTCAATGAAGGTTTGTTCCAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGCTCGCCAGGTCCATTTCCGGGCGGGTGGAACGGTGAAACCTGTCGCGTCCCACCCCTGCCGCGTCCAGTGTTAACTCCGCGCATCTTTTACGCAACGCTAGGCTTGTG > 4:259118/1‑277 GTACCTGATTCCACGGTACGGCTTCGTCGTAGGTATGCAGGTATTTGCGAGATTTCCCTTTGCCGCGCTGACCGTATTCAATGAAGGTTTGTTCCAGCAGGCCGAATTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGTGGT < 2:793248/277‑1 TTGCGGGATTTCCCTTTGCCGATCTGACCGTATTCAATGAAGGTTTGTTCCAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGTGGTCCCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGG < 2:756159/277‑1 ATTCAGTGAAGGTTGGTTCCGGCAGGACGAAGTCGTTAGCGTCGGGGGCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCAGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGTGGTCCCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTAT < 1:695776/275‑1 GGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGTGGTCCCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGC > 2:245928/1‑247 GCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGTGGTCCCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGCT < 4:245928/247‑1 CTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGG > 1:750762/1‑51 ATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGTGGT < 3:750761/51‑1 ccgggaggcggggGGTGTTTGTCCCCGCTCGGCTGGATCCTGTTACCGCAATGTCCGTATGTTTGGCAGACATAGTAAATCCATGACTTAGCTATCCTTTTTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCCCGGCATAATATTGACCGTTTCGTGCAGCTCCGACCATACCAGCACCGCTTCTCCGCACTGTAGCTGGCGTTTGACGTCGGCGACTTTCTGTTCAAGTGTACGCTCATGTTCACCATAATCGGTGCCT < 3:678512/261‑1 GGTGGTCCCCGCGCCGCTGGATCCTGTTACCGCAATGACCTGATGTTTGGCAGACATAGTAACGCCATGACTTAGCTATCATTATTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGCTCCGACCATACCAGCACCGCTTCTCCGCACTGTAGCTGGCGTTTGACGTCGGCGACTTTCTGTTCAAGTGTACGCTCATGTTCACCATAATCGGTGCCTTCACGTAACACAAAGCT < 1:449612/275‑1 TGGTCCCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGCTCCGACCATACCAGCACCGCTTCTCTGCACTGTAGCTGGCGTTTGACGTCGGCGCCTTTCTGTTCAAGTGTACGCTCATGTTCACCATAATCGGTTCCTTCACGTAACACAAAGCTTTCA > 2:582343/1‑277 TGGTCCCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGCCCCGACCATACCAGCACCGCTTCTCCGCACTGTAGCTGGCGTTTGACGTCGGCGACTTTCTGTTCAAGTGTCCGCTCATGTTCACCATAATCGGTGCCTTCATGTACCCCAAAGCTTT > 1:286798/1‑275 AATGTCCCCGGTACCTGATTCCACGGTACGGCTTCGTCGTAGGTATGCAGATATTTGCGAGATTTCCCTTTGCCGCTCTGACCGTATTCAATGAAGGTTTGTTCCAGCAGGCCGAAGTCGTTAGCCTCGGGGCCGAAGTAGCTGATATGCCGCCCGGCGTCGCGCGCTTTGCGGATCGCCATGTCCATTTCCGGGCGGGTGTAACGGTGAAAACTGTCGCCTTCCACCTCAGCTGCATGCAGATTTAACTGCGCGAATATTTTACGAAACGCGAGGCTGGTGGTGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3484830‑3484544 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtggtggtCCCCGCGCCGCTGGATCCTGTTACCGCAATGACCGGATGTTTGGCAGACATAGTAACTCCATGACTTAGCTATCATTATTATCTCGTCCGCCGACGGTTGCAGGTTATTCGCGAAACTGACTGCGCGGCATAATATTGACCGTTTCGTGCAGCTCCGACCATACCAGCACCGCTTCTCCGCACTGTAGCTGGCGTTTGACGTCGGCGACTTTCTGTTCAAGTGTACGCTCATGTTCACCATAATCGGTGCCTTCACGTAACACAAAGCTTTCA < NC_000913/3484540‑3484268 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |